mRNA_P-fluviatile_contig11.1027.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: D7FWT5_ECTSI (Geranylgeranyl pyrophosphate synthase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT5_ECTSI) HSP 1 Score: 248 bits (632), Expect = 1.260e-78 Identity = 138/193 (71.50%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 298 TLRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRAC----DPFGCAASVLSWATGEKL-LKVGVGG-GIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAKV 858
TLRCAAAAT+FDLKTYLGTKKD+VDKALDK+VVSTMP+TD+ D +L+W T K L +G G G+W A+S ++ YSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRR GMPTCHVKYGEDIAILAGDALLSKSFEHCAK+
Sbjct: 59 TLRCAAAATDFDLKTYLGTKKDSVDKALDKAVVSTMPQTDQDVVSGVPTDQKCIGWCLLAWRTERKASLALGRGQRGVWT----AVSRASIHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRR----------GMPTCHVKYGEDIAILAGDALLSKSFEHCAKL 237
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S2RH45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH45_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.510e-47 Identity = 95/185 (51.35%), Postives = 115/185 (62.16%), Query Frame = 1
Query: 301 LRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
+ A A+ FDLK+YL K +AVDKALD+S+V+T PE +++ +MRYSL+AGGKRVRPI+ IAACEM GG+ E AMPTAV+ EMIHTMSL+HDDLP+MD+DDLRR G PT HV +GEDIAILAGDALLS +FEHCAK
Sbjct: 38 VAAAPTASTFDLKSYLAEKAEAVDKALDESLVATCPEVEKI---------------------------------------TESMRYSLLAGGKRVRPIMCIAACEMLGGTQEMAMPTAVAIEMIHTMSLVHDDLPSMDNDDLRR----------GKPTNHVLFGEDIAILAGDALLSTAFEHCAK 173
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S2FLB2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLB2_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.430e-46 Identity = 99/193 (51.30%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 277 VRRGGASTLRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
RR A+ A A +FDLK YL K AV+ ALDKS+V + P+ V +MRYSLMAGGKR+RPI+ IAACEMFGGS + AMPTAV+ EMIHTMSL+HDDLPAMDDDDLRR G+PT HV YGEDIAILAGDALLS +FEHCA+
Sbjct: 36 ARRTFATAAAEADTAQDFDLKEYLIRKGAAVEDALDKSLVVSCPQVKEV---------------------------------------TESMRYSLMAGGKRIRPIMAIAACEMFGGSQDVAMPTAVAVEMIHTMSLVHDDLPAMDDDDLRR----------GVPTNHVVYGEDIAILAGDALLSTAFEHCAR 179
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A6U5JU78_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JU78_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.860e-45 Identity = 93/187 (49.73%), Postives = 117/187 (62.57%), Query Frame = 1
Query: 295 STLRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
S++ +A+AT FDL +YL K +++ALD S+VST+P+T+++ C+ +MRYSLMAGGKR+RP L +AAC MFGGS + AMPTAV+ EMIHTMSLIHDDLP+MDDDDLRR G PT HV YGED+AILAGDA+LS SFEH A+
Sbjct: 33 SSVSMSASATTFDLDSYLKEKIGVIEQALDASIVSTVPQTEKI--CE-------------------------------------SMRYSLMAGGKRIRPALCLAACNMFGGSDDDAMPTAVALEMIHTMSLIHDDLPSMDDDDLRR----------GKPTNHVLYGEDVAILAGDAMLSTSFEHVAR 170
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S3YD71_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YD71_9EUKA) HSP 1 Score: 164 bits (414), Expect = 2.050e-44 Identity = 97/178 (54.49%), Postives = 109/178 (61.24%), Query Frame = 1
Query: 322 TEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
T+FDL T+L KK +V+KALD SV S ET ++ CD AMRYSL+AGGKRVRP L IAACEM GG+ E MP+AV+ EMIHTMSLIHDDLPAMD+DDLRR GMPT HVKYGEDIAILAGDALLS+SF H AK
Sbjct: 83 TDFDLNTFLIEKKKSVEKALDASVQSNCKETGKI--CD-------------------------------------AMRYSLLAGGKRVRPALCIAACEMLGGTEEMCMPSAVALEMIHTMSLIHDDLPAMDNDDLRR----------GMPTSHVKYGEDIAILAGDALLSESFAHVAK 211
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: F0Y0W2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0W2_AURAN) HSP 1 Score: 162 bits (410), Expect = 4.190e-44 Identity = 94/178 (52.81%), Postives = 109/178 (61.24%), Query Frame = 1
Query: 319 ATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCA 852
A +FDLK Y K AV+KALD+S+ T PET K++ +MRYSL+AGGKRVRP++ IAACEMFGG+ AMPTAV+ EMIHTMSLIHDDLPAMD+DDLRR GMPT HV YG+D+AILAGDALLS SFEHCA
Sbjct: 53 AKDFDLKAYFAQKVAAVEKALDESLTCTTPET----------------------KIIV-----------------ESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRR----------GMPTNHVIYGDDVAILAGDALLSTSFEHCA 181
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S3Q3N6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3N6_9STRA) HSP 1 Score: 161 bits (407), Expect = 9.180e-44 Identity = 94/187 (50.27%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 295 STLRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
+T+ A +TEF L YL +KKD ++ +L SV ST P+TD++ C+ +M YSLMAGGKR+RP+L IAACEMFGGS EAAMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR G PT H+ YGED+AILAGDALLS SF+H A+
Sbjct: 37 ATVEEADTSTEFRLDKYLLSKKDDIEASLKASVKSTTPQTDKI--CE-------------------------------------SMDYSLMAGGKRIRPVLCIAACEMFGGSQEAAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR----------GKPTNHIIYGEDVAILAGDALLSTSFQHVAE 174
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S0ZLI6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLI6_9RHOD) HSP 1 Score: 158 bits (400), Expect = 2.680e-42 Identity = 92/174 (52.87%), Postives = 109/174 (62.64%), Query Frame = 1
Query: 334 LKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
L YL +KK VDKAL++SV S MPETD + C+ AM YSLMAGGKR+RPIL +AACE+FGGS +A+P+AV+ EMIHTMSLIHDDLPAMD+DD RR GMPT HVKYGEDIAILAGDA+L+KSFE+ A+
Sbjct: 94 LVEYLKSKKIIVDKALEESVKSNMPETDLI--CE-------------------------------------AMSYSLMAGGKRIRPILVLAACELFGGSESSALPSAVAVEMIHTMSLIHDDLPAMDNDDFRR----------GMPTNHVKYGEDIAILAGDAMLAKSFEYVAR 218
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: B8BXV9_THAPS (Geranylgeranyl pyrophosphate synthetase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV9_THAPS) HSP 1 Score: 157 bits (396), Expect = 3.610e-42 Identity = 90/187 (48.13%), Postives = 112/187 (59.89%), Query Frame = 1
Query: 295 STLRCAAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
+ L A+A T F L YL +K ++ AL+ SV S +P+TD++ C+ +M YSLMAGGKR+RP+L IAACEMFGGS + AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR G PT HV +GED+AILAGD+LLS SFEH A+
Sbjct: 34 TALNVASAETSFSLDEYLASKIGPIESALEASVKSRIPQTDKI--CE-------------------------------------SMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR----------GKPTNHVVFGEDVAILAGDSLLSTSFEHVAR 171
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Match: A0A7S2A4A8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4A8_TRICV) HSP 1 Score: 154 bits (389), Expect = 4.150e-42 Identity = 91/182 (50.00%), Postives = 109/182 (59.89%), Query Frame = 1
Query: 310 AAAATEFDLKTYLGTKKDAVDKALDKSVVSTMPETDRVRACDPFGCAASVLSWATGEKLLKVGVGGGIWQGYPEAISNTAMRYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRQVVLLAPYCLGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 855
A+A F L YL +KK ++ AL+ SV ST P TD++ C+ +M YSLMAGGKR+RP+L +AACEMFGG+ E AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR G PT HV YGED+AILAGDALLS SFEH A+
Sbjct: 43 ASATAAFSLDEYLLSKKGPIEAALEASVRSTGPNTDKI--CE-------------------------------------SMSYSLMAGGKRIRPVLCLAACEMFGGTEERAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR----------GKPTNHVIYGEDVAILAGDALLSTSFEHVAR 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1027.1 >prot_P-fluviatile_contig11.1027.1 ID=prot_P-fluviatile_contig11.1027.1|Name=mRNA_P-fluviatile_contig11.1027.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=286bp AAHHFHAVAPHSRATVARTKHTPTATMRGKTSAAAASAAIIAVGCMSPTAback to top mRNA from alignment at P-fluviatile_contig11:518862..521621+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1027.1 ID=mRNA_P-fluviatile_contig11.1027.1|Name=mRNA_P-fluviatile_contig11.1027.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2760bp|location=Sequence derived from alignment at P-fluviatile_contig11:518862..521621+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:518862..521621+ >mRNA_P-fluviatile_contig11.1027.1 ID=mRNA_P-fluviatile_contig11.1027.1|Name=mRNA_P-fluviatile_contig11.1027.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1716bp|location=Sequence derived from alignment at P-fluviatile_contig11:518862..521621+ (Porterinema fluviatile SAG_2381)back to top |