mRNA_P-fluviatile_contig11.1014.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1014.1
Unique NamemRNA_P-fluviatile_contig11.1014.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: D8LLH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH0_ECTSI)

HSP 1 Score: 444 bits (1141), Expect = 6.270e-147
Identity = 231/298 (77.52%), Postives = 256/298 (85.91%), Query Frame = 1 
Query:    1 MVRVLTSTWIVASLVPGACFLVPSGARTLLKSAAGRHRVCTGRERSSQQPSSPLPPPSVAAGELTKNSCCARRDVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALEDWKK 894
            M RVL S+W++ SLVPGACFLVP+ +R  L SA GR ++  G+    QQPSS  P          +N+   RR+VVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVEL VKA TVL+GATEGCSIAVNGVCLTVTSF+ +EFKVGLAPETLRR+NL DL  GDGVNLERALPVDGRNSGHFVQGHVDNVGTI+S E DEDSLVVKV+VP+DL+RYI PKGFIAVDGTSLTVCEV+N+E WFTFMLV+YTQQHV IPKKS GDKVNLEVDVLGKY+ERSLSSVLDRLGALEDW++
Sbjct:    1 MARVLASSWVIVSLVPGACFLVPTNSRAALHSA-GRRQL--GQGYRDQQPSSRQP----------RNTAAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDDEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRE 285
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A835Z1K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K1_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.520e-101
Identity = 166/238 (69.75%), Postives = 191/238 (80.25%), Query Frame = 1 
Query:  169 PSVAAGELTKNSCCARRDVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            P   +G   K S   RR V+RAMFSGIVEE G+V SL +N  +KLWDGS G GVEL + AK  L+GA+ GCSIAVNGVCLTVT FD E+F+VGLAPETLRR+NL DL  GD VNLERAL   GRNSGHFVQGHVD+VGTI +   + DSL V+V  PR+LMRYIVPKGFIA+DGTSLTVCEV+  E WFTFMLV+YTQ H+ +P K++GDKVN+EVDVLGKYVERSL+SVLDRL ALE
Sbjct:   44 PMGTSGTFAK-STSQRRAVIRAMFSGIVEEKGTVKSLERNSAIKLWDGSVGEGVELTIAAKVALEGASLGCSIAVNGVCLTVTDFDEEQFRVGLAPETLRRSNLRDLAAGDAVNLERALASGGRNSGHFVQGHVDDVGTIAAFTPEGDSLWVRVSAPRELMRYIVPKGFIAIDGTSLTVCEVNAAEAWFTFMLVAYTQAHIVLPGKAVGDKVNIEVDVLGKYVERSLASVLDRLDALE 280
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A8J6CDG9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDG9_DIALT)

HSP 1 Score: 298 bits (762), Expect = 7.180e-91
Identity = 158/241 (65.56%), Postives = 181/241 (75.10%), Query Frame = 1 
Query:  172 SVAAGELTKNSCCARRDVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEE--FKVGLAPETLRRTNL--ADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            S  A  + +++      + RAMFSGIVEEMG V SL +   +KLWDG+ G+G ELAV+  TVLDGAT+GCSIAVNGVCLTV  FD     F+VGLAPETLRRTNL  A L  GD VNLERALP DGRNSGHFVQGHVD VG +VS   D DSL V VK PR LM+YIVPKGFIAVDGTSLTVC+VD     F+FML+ YTQQHV IP+KS G  VNLE DV+GKYVERSL+ + +R+ ALE
Sbjct:   29 SAVAATMRRSTRAPAASLPRAMFSGIVEEMGRVESLAERTDMKLWDGTIGSGWELAVRGSTVLDGATQGCSIAVNGVCLTVVDFDAGSGVFRVGLAPETLRRTNLNPAALKAGDAVNLERALPADGRNSGHFVQGHVDAVGELVSLTPDGDSLWVVVKAPRSLMKYIVPKGFIAVDGTSLTVCDVDYAASTFSFMLIGYTQQHVVIPQKSAGLTVNLEADVIGKYVERSLAGLSERVAALE 269
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A6V1VK25_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VK25_HETAK)

HSP 1 Score: 295 bits (754), Expect = 7.580e-90
Identity = 152/221 (68.78%), Postives = 174/221 (78.73%), Query Frame = 1 
Query:  223 VVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAK-TVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            V R MFSGIVEEMG V SL +   +K+WDGS G+G EL +++  TVLDGA +G SIAVNGVCLTV  FD + F+VGLAPETLRR+NL  L  G  VNLERAL  D RNSGHFVQGHVD  GTI+    + DSL VKV V R+LMRYIVPKGFIA+DGTSLTVCE +  EGWF FMLV+YTQ+H+ IP KS+GDKVN+EVDVLGK VERSL +VLDRL ALE
Sbjct:   41 VPRMMFSGIVEEMGIVRSLEEKTDMKMWDGSTGSGTELCIESDGTVLDGAYDGASIAVNGVCLTVIEFDDKSFRVGLAPETLRRSNLPLLEAGQRVNLERALAADARNSGHFVQGHVDETGTILELRPEGDSLWVKVGVSRELMRYIVPKGFIAIDGTSLTVCETNVAEGWFNFMLVAYTQKHIIIPSKSLGDKVNVEVDVLGKLVERSLGNVLDRLDALE 261
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A0M0JSD6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSD6_9EUKA)

HSP 1 Score: 292 bits (747), Expect = 1.570e-89
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 1 
Query:  235 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            MFSGIVEEMG V+ L K  ++K WDG+ G G EL V+A   L+GA+ GCSIAVNGVCLTVT FD  +FKVGLAPET+RRTNL  LVPGD VN+ERALP DGRNSGHFVQGHVD++G I     D DSL V+V+ P  LM YIVPKGFIA+DGTSLTVC V+  EGWF FML+++TQQ V IPKK++GD VNLEVDVL KYVE+ L +V  RL ALE
Sbjct:    1 MFSGIVEEMGKVSKLDKVPRLKQWDGTVGEGWELEVEATVALEGASLGCSIAVNGVCLTVTEFDKHKFKVGLAPETIRRTNLERLVPGDPVNVERALPADGRNSGHFVQGHVDDIGIIEELRPDGDSLWVRVRPPARLMPYIVPKGFIAIDGTSLTVCNVNAAEGWFDFMLIAFTQQKVVIPKKAVGDAVNLEVDVLAKYVEQGLKAVTARLDALE 216
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A7S3AZ04_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ04_9EUKA)

HSP 1 Score: 292 bits (747), Expect = 2.900e-89
Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 1 
Query:  229 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            RAMFSGIVEEMG++  L K D + LWDGS G G E+ V+A  VL  A+ GCSIAVNGVCLTVT FD   F VGLAPET+RR+NL  L  GD VNLERALP DGRNSGHFVQGHVD+VG +     D DSL VKV+ P  L+ YIVPKGFIAVDGTSLTVCEV+  EGWF FMLV+YTQQ + IPKK +GD VNLEVDV+ KYVE+S++SVL RL ALE
Sbjct:   16 RAMFSGIVEEMGTIRRLEKVDGLTLWDGSVGEGWEMEVEASEVLGQASLGCSIAVNGVCLTVTEFDEGSFSVGLAPETIRRSNLVKLKTGDPVNLERALPADGRNSGHFVQGHVDDVGILEELLPDGDSLFVKVRPPARLLPYIVPKGFIAVDGTSLTVCEVNYTEGWFNFMLVAYTQQKIIIPKKKVGDPVNLEVDVISKYVEKSMASVLARLDALE 233
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A7S3SZI5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SZI5_9SPIT)

HSP 1 Score: 290 bits (743), Expect = 7.920e-89
Identity = 143/218 (65.60%), Postives = 169/218 (77.52%), Query Frame = 1 
Query:  229 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            R +FSGIVEE+G V  L K   + LWDGS G GVE+ V A TVL+GA EGCSIAVNGVCLTVT FD +    GLAPETLRRTNL    PG  VNLERALP DGRNSGHFVQGHVD+VG I S   D ++L V+++ P  LM+YIVPKGFI VDGTSLTVCE D  +GWF FMLV+YTQQH+ +PKK +G++VNLEVDV+ KYVERS+ +++DR+  LE
Sbjct:    2 RCVFSGIVEEIGEVVRLEKRGDLTLWDGSVGEGVEMEVAASTVLEGAYEGCSIAVNGVCLTVTKFDDKTACFGLAPETLRRTNLHAAGPGTLVNLERALPADGRNSGHFVQGHVDDVGVIESMTPDGEALTVRIRPPAHLMKYIVPKGFICVDGTSLTVCEADPGKGWFDFMLVAYTQQHIALPKKKVGEQVNLEVDVMAKYVERSVGALVDRVAELE 219
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: A0A7S1ZE03_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZE03_TRICV)

HSP 1 Score: 288 bits (738), Expect = 2.700e-87
Identity = 147/243 (60.49%), Postives = 177/243 (72.84%), Query Frame = 1 
Query:  169 PSVAAGELTKNSCCARRDVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFD--GEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDN--EEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALED 885
            P+VA G +       R    R MF+GIVEEMG V SL + D + LWDGS+G G EL VK K  +DGA  GCSI V+GVCLT T  D   ++FKVGLAPETLRRT L  L PG  VNLERA  + GRNSGHFVQGHVD +GTI+   TDEDSL  KV+V  DL+RYIVPKGF+A+DGTSLTVCEVD   +E WFTFMLV YTQ+ + IP+K +GD +N+EVDVLGKY E ++++VL R+  LE+
Sbjct:   27 PNVAPGGVNGKVRAGRTTTRRRMFTGIVEEMGEVVSLEERDDMTLWDGSKGKGTELTVKGKVAMDGAYLGCSICVSGVCLTATELDFPSDQFKVGLAPETLRRTYLGSLKPGSAVNLERASEIGGRNSGHFVQGHVDGIGTIIDRWTDEDSLFFKVQVDDDLLRYIVPKGFVAIDGTSLTVCEVDTRPDEKWFTFMLVEYTQKKIIIPQKVVGDPLNIEVDVLGKYSESAIAAVLPRIEELEN 269
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BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: B7G545_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G545_PHATC)

HSP 1 Score: 283 bits (725), Expect = 3.580e-86
Identity = 139/218 (63.76%), Postives = 170/218 (77.98%), Query Frame = 1 
Query:  235 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEE--FKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            MF+GIVEEMG V SL + D + LWDG++G+G EL VKA  +++GA  GCSI V+GVCLT T  D +E  F+VGLAPET+RRT L DL  GD VNLERA  + GRNSGHFVQGHVD+ G I+   TDEDSL  K+KV  D++ YIVPKGFIA+DGTSLTVCEVD +E WFTFMLV YTQ+ + +P K +GD+VNLEVDVLGKY E +L++++ RL ALE
Sbjct:    1 MFTGIVEEMGEVVSLTQRDDMPLWDGTKGSGTELTVKASIMMEGAYLGCSICVSGVCLTATELDYDESIFRVGLAPETIRRTYLGDLKTGDAVNLERASEIGGRNSGHFVQGHVDDTGEIIDRWTDEDSLFFKIKVTPDVLAYIVPKGFIAIDGTSLTVCEVDYQEKWFTFMLVEYTQKKIIVPAKKVGDRVNLEVDVLGKYSENALAALIPRLEALE 218
[Close]
BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Match: L1IN27_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IN27_GUITC)

HSP 1 Score: 280 bits (716), Expect = 6.620e-85
Identity = 143/217 (65.90%), Postives = 166/217 (76.50%), Query Frame = 1 
Query:  235 MFSGIVEEMGSVASLVKNDKV-KLWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGLAPETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTETDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLVSYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALE 882
            MF+GIVEEMG++  +    K    W+GS+G G+ L V    VL+G  EGCSIAVNGVCLTVT FD E F VG+APET+R+TNL  L  G  VNLERA  +DGRNSGH VQGHVDNVG I+    D++SL +KVK PR+LM+YIVPKGFIA+DGTSLTVCE D   GWFTFML+ YTQQHV IPKK IGDKVNLEVDV+ KYVERSL ++ DRL  LE
Sbjct:    1 MFTGIVEEMGAIKEVKNGFKGWGEWEGSDG-GMTLRVGGGKVLEGCYEGCSIAVNGVCLTVTEFDSESFTVGVAPETIRKTNLGLLGQGSPVNLERAAAMDGRNSGHMVQGHVDNVGEIIEKWQDKESLFIKVKAPRELMQYIVPKGFIAIDGTSLTVCETDVANGWFTFMLIDYTQQHVIIPKKPIGDKVNLEVDVISKYVERSLGNINDRLSRLE 216
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLH0_ECTSI6.270e-14777.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1K1_9STRA1.520e-10169.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6CDG9_DIALT7.180e-9165.56Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6V1VK25_HETAK7.580e-9068.78Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A0M0JSD6_9EUKA1.570e-8968.06Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S3AZ04_9EUKA2.900e-8968.81Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3SZI5_9SPIT7.920e-8965.60Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S1ZE03_TRICV2.700e-8760.49Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7G545_PHATC3.580e-8663.76Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
L1IN27_GUITC6.620e-8565.90Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:405593..409594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score444.5
Seed ortholog evalue5e-122
Seed eggNOG ortholog2880.D8LLH0
Preferred nameRIB5
KEGG rclassRC00958,RC00960
KEGG koko:K00793,ko:K22382
KEGG ReactionR00066
KEGG Pathwayko00740,ko01100,ko01110,map00740,map01100,map01110
KEGG ModuleM00125
GOsGO:0003674,GO:0003824,GO:0004746,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.riboflavin synthase activity
EggNOG OGsCOG0307@1,KOG3310@2759
EC2.5.1.9
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionRiboflavin synthase, putative
Ec32 orthologEc-00_004570.1
Exons6
Model size2615
Cds size1140
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815436.9496884-UTR-P-fluviatile_contig11:405592..4070671622815436.9496884-UTR-P-fluviatile_contig11:405592..407067Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 405593..407067 -
1693561862.8448598-UTR-P-fluviatile_contig11:405592..4070671693561862.8448598-UTR-P-fluviatile_contig11:405592..407067Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 405593..407067 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815436.9649787-CDS-P-fluviatile_contig11:407067..4074451622815436.9649787-CDS-P-fluviatile_contig11:407067..407445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 407068..407445 -
1693561862.858052-CDS-P-fluviatile_contig11:407067..4074451693561862.858052-CDS-P-fluviatile_contig11:407067..407445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 407068..407445 -
1622815436.9762154-CDS-P-fluviatile_contig11:407720..4078551622815436.9762154-CDS-P-fluviatile_contig11:407720..407855Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 407721..407855 -
1693561862.9866233-CDS-P-fluviatile_contig11:407720..4078551693561862.9866233-CDS-P-fluviatile_contig11:407720..407855Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 407721..407855 -
1622815436.9910989-CDS-P-fluviatile_contig11:408132..4083181622815436.9910989-CDS-P-fluviatile_contig11:408132..408318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 408133..408318 -
1693561862.9975505-CDS-P-fluviatile_contig11:408132..4083181693561862.9975505-CDS-P-fluviatile_contig11:408132..408318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 408133..408318 -
1622815437.00671-CDS-P-fluviatile_contig11:408613..4088431622815437.00671-CDS-P-fluviatile_contig11:408613..408843Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 408614..408843 -
1693561863.006146-CDS-P-fluviatile_contig11:408613..4088431693561863.006146-CDS-P-fluviatile_contig11:408613..408843Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 408614..408843 -
1622815437.0218072-CDS-P-fluviatile_contig11:409175..4093371622815437.0218072-CDS-P-fluviatile_contig11:409175..409337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 409176..409337 -
1693561863.0142946-CDS-P-fluviatile_contig11:409175..4093371693561863.0142946-CDS-P-fluviatile_contig11:409175..409337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 409176..409337 -
1622815437.03367-CDS-P-fluviatile_contig11:409545..4095941622815437.03367-CDS-P-fluviatile_contig11:409545..409594Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 409546..409594 -
1693561863.159087-CDS-P-fluviatile_contig11:409545..4095941693561863.159087-CDS-P-fluviatile_contig11:409545..409594Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 409546..409594 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1014.1prot_P-fluviatile_contig11.1014.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 407068..409594 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1014.1

>prot_P-fluviatile_contig11.1014.1 ID=prot_P-fluviatile_contig11.1014.1|Name=mRNA_P-fluviatile_contig11.1014.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=380bp
MVRVLTSTWIVASLVPGACFLVPSGARTLLKSAAGRHRVCTGRERSSQQP
SSPLPPPSVAAGELTKNSCCARRDVVRAMFSGIVEEMGSVASLVKNDKVK
LWDGSEGAGVELAVKAKTVLDGATEGCSIAVNGVCLTVTSFDGEEFKVGL
APETLRRTNLADLVPGDGVNLERALPVDGRNSGHFVQGHVDNVGTIVSTE
TDEDSLVVKVKVPRDLMRYIVPKGFIAVDGTSLTVCEVDNEEGWFTFMLV
SYTQQHVGIPKKSIGDKVNLEVDVLGKYVERSLSSVLDRLGALEDWKKVR
LRCRMYPYVAHGVRMQYFHACDYLFVSFPHIRPRSRAHGHIMQEMYTVHA
QIQQGRGEESHKIALVHEAKDTGTAQVRE*
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mRNA from alignment at P-fluviatile_contig11:405593..409594-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1014.1 ID=mRNA_P-fluviatile_contig11.1014.1|Name=mRNA_P-fluviatile_contig11.1014.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4002bp|location=Sequence derived from alignment at P-fluviatile_contig11:405593..409594- (Porterinema fluviatile SAG_2381)
ATGGTGAGGGTGCTTACGTCGACTTGGATCGTTGCATCCCTCGTTCCAGG
TAGGACTGTTCATTGGTGGGTGGTAAGAGGTGTGTGTCGGACATTCGAGC
GAATGTTGACTCGCCTAGCAATTTCACAGCTGTCAGCGCCACAGAGCTGC
TCTCCAGCAGCGGGGGGAGTTTACCTCTGTGTGCGCATGCCTCATTGCAG
ATCCTTGAACTCCGTTATGCAACCAATGGAGGAAGAACCTCGTACCATCG
ATCGCAGGGGCGTGCTTCCTGGTGCCTTCGGGCGCAAGAACCTTGCTGAA
GTCGGCGGCCGGCCGCCACCGTGTTTGCACCGGGCGAGAGCGCAGTAGTC
AACAGCCGTCCTCACCACTCCCTCCACCTTCCGTCGCAGCAGGCGAGCTA
ACAAAAAACTCCTGCTGTGGTTAGTTTCTACCAGCACAAAGCCACAATGG
CAATACTTCGTTTTGTTATGCAACCGCAGTACTTACAGGCATTTGCCAGG
AGTTCGTTGTGTTGATCGAAAACATGCTCTGCAGTTGGTACGATTGTGGG
CCGCCCGCAAGCACAGATTCCGCTGCGAAGAAAGGTAATAAGGCAAGTCA
ATTAAGTAAGATTTTCCTTGTTGCTACGCGAGTTATCACGCAGCGCAAGA
AAGGCTGCTGCATGGCGTCAAAATGGCGGCAACGCCATCATCTTTTACTC
ATACCCCGTCTCCTGTATCTGTGCCCCGTTGAATGTGTCAATCCCCTTCA
GCGCGACGAGATGTCGTGCGAGCAATGTTCTCCGGTATCGTAGAGGAAAT
GGGCTCCGTGGCCTCTCTTGTGAAAAACGATAAGGTCAAGCTCTGGGACG
GCTCCGAGGGCGCGGGCGTCGAGCTCGCCGTAAAGGCGAAAACCGTTTTG
GACGGAGCCACAGAGGGGTGCAGCATCGCCGTCAACGGCGTCTGTCTGAC
CGTGACTTCGTTCGACGGCGAGGAGTTCAAGGTATCTACCTATGGCTGGA
TGTCAATGCGTGAAGTTTCAGGGCGCGGTACTTCAAGGCACTGCAAGATG
TATTCAGAGTAATGCTCAAGTGCTGCGCGCTTTGTGAGACAAATCAGTGT
CAGCAAACAGAGAGCCCGTCCGCGGCAGCGGCAGGGCAAGTTTCCCCCAG
AAAATGTGCTCTGTTTGGGCTTCGTGGGGGGTATTACGCATTCTGGCCAC
ATTTGCTGTTTTGGATTTGCTCACAGGGATACTGCGCTGACGAACAATTC
TTGTAATTTCTTGTCCAACATTTCAGGTTGGCCTCGCGCCCGAGACGCTA
CGGAGAACCAACTTAGCAGACTTGGTGCCGGGGGACGGAGTGAACCTGGA
GAGAGCGTTGCCTGTGGACGGGCGCAACAGCGGGCACTTCGTGCAGGGGC
ACGTGGACAACGTCGGGACCATCGTGAGCACGGAAACCGACGAAGACTCC
CTCGTTGTCAAGGTGCGGGCGGACGAAGTGTGAGGTTCCCTCGCTGGCCG
ATAAGTTCCGGCCACATGCCTCGCGTGGCAACACCTGATGGATGTTGTGC
TACGAACAATGTTCGCACGGCTGTGTACGAGCGCAGGTGCGCCTCTCGCG
TTCGCCCGGCCCTCTTCACTCGCCAAGGCGGCCGGACGAAGCGTGCTACG
CACGCATGGGCTCCTCTCGGATACAGAACACCCTTGCCACCGCAGAACCT
TAGCTCTTTCTGTCCTCAAAACGATTTCCGCGCGCACAGGTTAAAGTGCC
CCGGGATCTGATGAGATATATCGTCCCCAAAGGCTTCATCGCGGTGGATG
GCACGAGCCTCACGGTGTGCGAAGTCGACAACGAAGAGGGCTGGTTCACC
TTCATGCTGGTCTCGTACACCCAGGTGAGGCTCAGGTCTTCGGGCGCGTC
TGTGGGCAGGAGGCAATGCGGGACAATCACTGCGTTAAAGTCGCTTTTGT
CGCCTCGAACTCTCCAACTCCTGCTGCAGGCTCGAGTCTGGCAAACTCTT
TATGTCTCCAGCGCTGTAGGATTGCAACTCTGTGCTGTCTCCCGACAAGG
ATGCCACGCGGCGCGTGAACGGTAACCACGCGGGCACCACCTGTGCATGT
GCCATGTCGCTTGCCCATCCCTCCCGCTGCTCCCCACCCTTGAGAGCAGC
AACACGTCGGAATTCCGAAGAAGAGCATAGGCGACAAGGTCAACCTGGAG
GTGGACGTACTTGGCAAGTACGTGGAACGTTCTTTGTCTTCGGTGCTCGA
CCGATTAGGAGCTCTCGAGGACTGGAAAAAGGTCAGGCTACGTTGTAGAA
TGTATCCGTATGTGGCACACGGAGTACGCATGCAATATTTTCACGCGTGC
GATTATCTTTTCGTGTCGTTTCCGCACATCAGGCCTCGCTCCCGAGCCCA
TGGTCACATTATGCAAGAAATGTACACCGTCCACGCCCAAATCCAACAGG
GGAGAGGGGAGGAGAGCCACAAAATTGCGCTCGTACACGAAGCAAAGGAT
ACCGGCACCGCGCAAGTCCGTGAATAAGGTCGATCGACCTTTGAGCAGGC
TGCTGGCAAAAAACTTACCGACGAGTCGCTTGACAGAAAGATCATATCTA
TTTGGGCGGTAGAGGGGCGGCCGCTTCTTTGAACCCACCAAGGTATGCAG
TTCGTGCGCGCACGCTTGGAATACTGAGGAAGGCGCCTTGAACCGCACAA
GTGAGCGTTCAGTTTCCGCTCAACCTTTCCGAGGGCGAGGAAGGCAGACT
CAATTTCTTGAAAGGTGGCGTTGTGAAGGGCCACAAGGCCATCACGGCAG
TCCCCTCGGTGCACCTAAAATTCTGTCGGTTTTTGTGCGGTTGATTGCTT
GCCGTTGACGTTTGGATTCCGGTCCAATGCCTTCGCCCCTTTGGAAACCG
AGGAGCAAAGCACCTCGAGCGTGCGCGATGCCGCACGTCCTTGTCCCGAT
GTTCGTGTGCCTTCTCCATCTCGCACTGGACGTGCGCTTCGAGATATTGA
GCAGTGCGTCAGGGACGGCACCAAAGTAGAGGTATCACATGCGCTCATGG
TGCACATTTTCGCCCCCCAGATTTTGTGTTACCTCTGGAGTTTCCGATCC
GCCCATGTAGTACGCAGAACGTATTTGCGGCAGATGTGCCGTATGTTCGT
CCCGCTCTATTGACATCTCATTTTCAGGTTTTGCTGTCATTCGCTCGAGC
ATTTCTTGAAAACCCGACAAGTATCTCAAAATTTTGCGTTTGAAAGAATT
TTTTGCGCAAATGTCAACCGTTTCCCTCGACTGTATTGGTTTGTCGATCG
ACTGCCGTGCGCGTTCTCACCGCACGCACACGGCCGTCTGATTTACTCTC
CTCGTTTCGCCGCAGGCGACTGACCTGAAGTTGAAGTCGATAGGCGCGGC
GAAGTCGTCCGAGGACATCGACTACAAAATTCGTCACGTGGAGCACAAAG
TGAAGAACCGCGACATGATCTTGGATACCATTGAGAACAGACTGGCTCGC
CTTGAGGCCCAAGGCCGAAGTAGTGATTCTTCCTCCAGTAATTAGAGCGG
CAGAAGTGTAGGAGAATATTTCCGTGCGTAAAGTCGGTGGCTTGATCTGT
GATCGTGCCCCTGTTTTCTGTTGATTCGGCTGCGCCCATTCGTGGAAGCG
TTACCGAGATCGCTCGTGGGATGGCTCTGCCCGCGTATTTTGGGTATACG
TGCCCCGCGCGTTTGGGTTTGAGTCAAGCTTCTGAGGCTTAAGCTCTCCA
TTGGCGTGTTCGGTCATTCGCGCGCACAAGGCCGTACTTTGGAGTCCCCC
AAATGTCCCGGTCAAAGGTGGTGGTAAATCTACGAGATGACTGCCCCGGC
AAGTAAGATATGCTGTGCTTGAAGTTGTATTACGGTTTATCCCGCGAAAC
GTTGCTATTGCGATCACGGTGGACTCGGAATCCAAGCGGTGAGAGAGAAC
GACTCCACGCTGAAGACGTGCTAAAGCAGTTCAAAAGTCTTGTGGAGCAG
AG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:405593..409594-

>mRNA_P-fluviatile_contig11.1014.1 ID=mRNA_P-fluviatile_contig11.1014.1|Name=mRNA_P-fluviatile_contig11.1014.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2280bp|location=Sequence derived from alignment at P-fluviatile_contig11:405593..409594- (Porterinema fluviatile SAG_2381)
ATGGTGAGGGTGCTTACGTCGACTTGGATCGTTGCATCCCTCGTTCCAGA
TGGTGAGGGTGCTTACGTCGACTTGGATCGTTGCATCCCTCGTTCCAGGG
GCGTGCTTCCTGGTGCCTTCGGGCGCAAGAACCTTGCTGAAGTCGGCGGC
CGGCCGCCACCGTGTTTGCACCGGGCGAGAGCGCAGTAGTCAACAGCCGT
CCTCACCACTCCCTCCACCTTCCGTCGCAGCAGGCGAGCTAACAAAAAAC
TCCTGCTGTGGGGCGTGCTTCCTGGTGCCTTCGGGCGCAAGAACCTTGCT
GAAGTCGGCGGCCGGCCGCCACCGTGTTTGCACCGGGCGAGAGCGCAGTA
GTCAACAGCCGTCCTCACCACTCCCTCCACCTTCCGTCGCAGCAGGCGAG
CTAACAAAAAACTCCTGCTGTGCGCGACGAGATGTCGTGCGAGCAATGTT
CTCCGGTATCGTAGAGGAAATGGGCTCCGTGGCCTCTCTTGTGAAAAACG
ATAAGGTCAAGCTCTGGGACGGCTCCGAGGGCGCGGGCGTCGAGCTCGCC
GTAAAGGCGAAAACCGTTTTGGACGGAGCCACAGAGGGGTGCAGCATCGC
CGTCAACGGCGTCTGTCTGACCGTGACTTCGTTCGACGGCGAGGAGTTCA
AGCGCGACGAGATGTCGTGCGAGCAATGTTCTCCGGTATCGTAGAGGAAA
TGGGCTCCGTGGCCTCTCTTGTGAAAAACGATAAGGTCAAGCTCTGGGAC
GGCTCCGAGGGCGCGGGCGTCGAGCTCGCCGTAAAGGCGAAAACCGTTTT
GGACGGAGCCACAGAGGGGTGCAGCATCGCCGTCAACGGCGTCTGTCTGA
CCGTGACTTCGTTCGACGGCGAGGAGTTCAAGGTTGGCCTCGCGCCCGAG
ACGCTACGGAGAACCAACTTAGCAGACTTGGTGCCGGGGGACGGAGTGAA
CCTGGAGAGAGCGTTGCCTGTGGACGGGCGCAACAGCGGGCACTTCGTGC
AGGGGCACGTGGACAACGTCGGGACCATCGTGAGCACGGAAACCGACGAA
GACTCCCTCGTTGTCAAGGTTGGCCTCGCGCCCGAGACGCTACGGAGAAC
CAACTTAGCAGACTTGGTGCCGGGGGACGGAGTGAACCTGGAGAGAGCGT
TGCCTGTGGACGGGCGCAACAGCGGGCACTTCGTGCAGGGGCACGTGGAC
AACGTCGGGACCATCGTGAGCACGGAAACCGACGAAGACTCCCTCGTTGT
CAAGGTTAAAGTGCCCCGGGATCTGATGAGATATATCGTCCCCAAAGGCT
TCATCGCGGTGGATGGCACGAGCCTCACGGTGTGCGAAGTCGACAACGAA
GAGGGCTGGTTCACCTTCATGCTGGTCTCGTACACCCAGGTTAAAGTGCC
CCGGGATCTGATGAGATATATCGTCCCCAAAGGCTTCATCGCGGTGGATG
GCACGAGCCTCACGGTGTGCGAAGTCGACAACGAAGAGGGCTGGTTCACC
TTCATGCTGGTCTCGTACACCCAGCAACACGTCGGAATTCCGAAGAAGAG
CATAGGCGACAAGGTCAACCTGGAGGTGGACGTACTTGGCAAGTACGTGG
AACGTTCTTTGTCTTCGGTGCTCGACCGATTAGGAGCTCTCGAGGACTGG
AAAAAGGTCAGGCTACGTTGTAGAATGTATCCGTATGTGGCACACGGAGT
ACGCATGCAATATTTTCACGCGTGCGATTATCTTTTCGTGTCGTTTCCGC
ACATCAGGCCTCGCTCCCGAGCCCATGGTCACATTATGCAAGAAATGTAC
ACCGTCCACGCCCAAATCCAACAGGGGAGAGGGGAGGAGAGCCACAAAAT
TGCGCTCGTACACGAAGCAAAGGATACCGGCACCGCGCAAGTCCGTGAAT
AACAACACGTCGGAATTCCGAAGAAGAGCATAGGCGACAAGGTCAACCTG
GAGGTGGACGTACTTGGCAAGTACGTGGAACGTTCTTTGTCTTCGGTGCT
CGACCGATTAGGAGCTCTCGAGGACTGGAAAAAGGTCAGGCTACGTTGTA
GAATGTATCCGTATGTGGCACACGGAGTACGCATGCAATATTTTCACGCG
TGCGATTATCTTTTCGTGTCGTTTCCGCACATCAGGCCTCGCTCCCGAGC
CCATGGTCACATTATGCAAGAAATGTACACCGTCCACGCCCAAATCCAAC
AGGGGAGAGGGGAGGAGAGCCACAAAATTGCGCTCGTACACGAAGCAAAG
GATACCGGCACCGCGCAAGTCCGTGAATAA
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