mRNA_P-fluviatile_contig11.1011.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: D8LLH4_ECTSI (Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECTSI) HSP 1 Score: 203 bits (516), Expect = 2.390e-54 Identity = 127/224 (56.70%), Postives = 138/224 (61.61%), Query Frame = 2
Query: 11 MAGGTSGETVSLHGSLGLAEMKQQQQRQAA--APSLICVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLRHTALSSEAAAAAATALDSSQSALAADGSGGDPFWEAGGLLLAAVIEHACFAAGAVAFAASRLRTVEAAAAKAHRIRSGQSGRRQDRNASSDEGSRRIE 676
MA G+S ET+S+ GS LAE A +CVECGRPVALLFREYNKGNIRLGRC YCRSVADKYIE EFVLIAIDL LHRVQAYRHLLFNM+PFSTHSF GRLWQLGV MAALDAHLRHTALSSEA +EHACFAAGAV FA SR+R Q+GRR R+ + G R+ E
Sbjct: 1 MAVGSSAETMSMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEHACFAAGAVLFATSRVRAAAXXXXXXXXXXXXQTGRRSTRSTGTINGGRQEE 222
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A7S1CNP5_9STRA (Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNP5_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.830e-24 Identity = 50/97 (51.55%), Postives = 68/97 (70.10%), Query Frame = 2
Query: 80 QQQRQAAAPSLICVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALD 370
QQ+ + ++ICV CGR ++ +FREY+KGNIRL RC +C++VADKYIE E VLIAID+VLHR+ YRHLLFN + H + + +A+ LD
Sbjct: 5 QQRHRGRRAAMICVVCGRSLSHVFREYSKGNIRLSRCDHCKNVADKYIEYELVLIAIDMVLHRISVYRHLLFNRLEYQEHGVPRPIVMIAIAILCLD 101
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A836DLE2_9ROSI (Protein ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DLE2_9ROSI) HSP 1 Score: 106 bits (265), Expect = 1.660e-22 Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 2
Query: 71 MKQQQQRQAAAPSLICVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
M+ + R++ CVECG P+ LF +Y+ GNIRL RC C++VAD+YIECEF++I+IDL+LH+ +AYRHLLFN+ T +F G LW+ A LDA+
Sbjct: 1 MQTGRARESKKMEPRCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIISIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 102
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A3N7FYG6_POPTR (Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_POPTR) HSP 1 Score: 105 bits (262), Expect = 3.070e-22 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
CVECG P+ LF +Y+ GNIRL RC C++VAD+YIECEF++I IDL+LH+ +AYRHLLFN+ T +F G LW+ A LDA+
Sbjct: 5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A3N7G147_POPTR (Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_POPTR) HSP 1 Score: 105 bits (262), Expect = 7.120e-22 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
CVECG P+ LF +Y+ GNIRL RC C++VAD+YIECEF++I IDL+LH+ +AYRHLLFN+ T +F G LW+ A LDA+
Sbjct: 5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A2P2MPP1_RHIMU (Protein ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MPP1_RHIMU) HSP 1 Score: 99.8 bits (247), Expect = 8.920e-21 Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
CV+CG + LF +Y+ GNIRL +C C++VAD+YIECEF++I IDL+LH+ QAYRHLL+N+ T +F G LW+ + LDA+
Sbjct: 6 CVKCGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECEFMIILIDLILHKPQAYRHLLYNVLFQETVNFQGLLWKSTIGFLVLDAY 92
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A1S3TC60_VIGRR (Protein ARV n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3TC60_VIGRR) HSP 1 Score: 100 bits (248), Expect = 7.400e-20 Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
C++CG PV L+ +Y+ GNIRL +C CR+VAD+YIECE +++ IDL+LH+ +AYRHLL N+ T F G LW+L + +AH
Sbjct: 5 CIQCGCPVKTLYVQYSPGNIRLMKCENCRAVADEYIECEIMILVIDLILHKPKAYRHLLHNVINQKTMKFQGLLWKLAIVFLLFEAH 91
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: D7U850_VITVI (Protein ARV n=4 Tax=Vitis TaxID=3603 RepID=D7U850_VITVI) HSP 1 Score: 99.8 bits (247), Expect = 1.000e-19 Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 2
Query: 110 LICVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 376
L C+ CG P+ LF +Y+ GNIRL +C C++VAD+YIECE +++ IDL+LH+ +AYRHLLFN+ T +F G LW+ + LDA+
Sbjct: 3 LRCIHCGFPIKTLFLQYSPGNIRLMKCENCKAVADEYIECESMIVLIDLILHKPKAYRHLLFNLLNPQTLNFQGLLWKSALGFLLLDAY 91
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: A0A2J6KTN8_LACSA (Protein ARV n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6KTN8_LACSA) HSP 1 Score: 98.6 bits (244), Expect = 1.920e-19 Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLRHTALSSEAAAAAATALDSSQSALAADGSGGDP--FWEAGGLLLAAVIEHACF 532
CV+CG + L+ +Y+ GNIRL +C+ C++VAD+YIECE +++ IDL+LH+ +AYRHL +NM +F G +W+L LD + R + LS+ +GSG DP WE G +LL ++ + F
Sbjct: 5 CVQCGHHIKTLYVQYSPGNIRLMKCQNCKAVADEYIECEIMILLIDLILHKAKAYRHLFYNMFDHEAINFEGLMWKLSFGFLLLDVY-RISILSTN-----------------EEGSGSDPSLVWECGKILLDVLVGNLLF 127
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Match: I1N8R1_SOYBN (Protein ARV n=2 Tax=Glycine max TaxID=3847 RepID=I1N8R1_SOYBN) HSP 1 Score: 97.4 bits (241), Expect = 2.450e-19 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 2
Query: 116 CVECGRPVALLFREYNKGNIRLGRCRYCRSVADKYIECEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGV 352
C++CG PV L+ +Y+ GNIRL +C C++VAD+YIECE +++AIDL+LH+ +AYRHLL N+ T F G LW+L V
Sbjct: 5 CIQCGCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILAIDLILHKPKAYRHLLHNVINQETMKFQGLLWKLAV 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1011.1 >prot_P-fluviatile_contig11.1011.1 ID=prot_P-fluviatile_contig11.1011.1|Name=mRNA_P-fluviatile_contig11.1011.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=282bp MAGGTSGETVSLHGSLGLAEMKQQQQRQAAAPSLICVECGRPVALLFREYback to top mRNA from alignment at P-fluviatile_contig11:380588..385266- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1011.1 ID=mRNA_P-fluviatile_contig11.1011.1|Name=mRNA_P-fluviatile_contig11.1011.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4679bp|location=Sequence derived from alignment at P-fluviatile_contig11:380588..385266- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:380588..385266- >mRNA_P-fluviatile_contig11.1011.1 ID=mRNA_P-fluviatile_contig11.1011.1|Name=mRNA_P-fluviatile_contig11.1011.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1692bp|location=Sequence derived from alignment at P-fluviatile_contig11:380588..385266- (Porterinema fluviatile SAG_2381)back to top |