mRNA_P-fluviatile_contig108.969.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig108.969.1
Unique NamemRNA_P-fluviatile_contig108.969.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A2E8MX70_9RICK (ATP synthase F(0) sector subunit c n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E8MX70_9RICK)

HSP 1 Score: 122 bits (306), Expect = 4.770e-35
Identity = 65/73 (89.04%), Postives = 72/73 (98.63%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            MLEA+QK+GAGLST+GLAGCGLGIG+VFA LL+ST+LNPFIKDDLFRVAMLGFALTEAIALFTLM+TFLVLFS
Sbjct:    1 MLEASQKIGAGLSTSGLAGCGLGIGVVFASLLVSTSLNPFIKDDLFRVAMLGFALTEAIALFTLMITFLVLFS 73
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: Q9G908_OCHDN (ATP synthase subunit 9, mitochondrial n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G908_OCHDN)

HSP 1 Score: 97.4 bits (241), Expect = 4.030e-25
Identity = 51/72 (70.83%), Postives = 63/72 (87.50%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLF 216
            +L+AAQK+GAGLST GLAG G+GIG++F  L++ T+ NP +KDDLFRVA+LGFALTEAIALF LM+ FLVLF
Sbjct:    2 LLQAAQKIGAGLSTFGLAGAGIGIGVIFGSLIIGTSRNPNLKDDLFRVAILGFALTEAIALFALMIGFLVLF 73
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: Q9MGA0_9STRA (ATP synthase subunit 9, mitochondrial n=2 Tax=cellular organisms TaxID=131567 RepID=Q9MGA0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.400e-24
Identity = 49/72 (68.06%), Postives = 61/72 (84.72%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLF 216
            +L+AAQK+GAGLST GLAG G+GIGL+FA L++  + NP +KDDLFR A+LGFA TEAIALF LM+ FL+LF
Sbjct:    2 LLQAAQKIGAGLSTFGLAGAGIGIGLIFASLIIGVSRNPNLKDDLFRFAILGFAFTEAIALFALMIAFLILF 73
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A0U2LTP8_9PHAE (ATP synthase subunit 9, mitochondrial n=153 Tax=Stramenopiles TaxID=33634 RepID=A0A0U2LTP8_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.970e-23
Identity = 49/73 (67.12%), Postives = 63/73 (86.30%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +++AA+ LGAGL+T GLAG G+GIG VFA L+L TA NP +KD+LFR+A+LGFALTEAIALF LM+ FL+LF+
Sbjct:    2 LVQAAKLLGAGLATIGLAGAGVGIGTVFAALVLGTARNPSLKDELFRIAILGFALTEAIALFALMMAFLILFA 74
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: D2Z269_HETAK (ATP synthase subunit 9, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z269_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 2.300e-22
Identity = 49/73 (67.12%), Postives = 61/73 (83.56%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +L+AA+ +GAGL+T GLAG G+GIG VF+ L+L T+ NP IKDDLFR A+LGFALTEA ALF LMV FL+LF+
Sbjct:    2 LLQAAKFVGAGLATIGLAGAGVGIGTVFSALVLGTSRNPSIKDDLFRFAILGFALTEATALFALMVAFLILFA 74
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A2Z5ZBT2_9STRA (ATP synthase subunit 9, mitochondrial n=11 Tax=Bacillariophycidae TaxID=33850 RepID=A0A2Z5ZBT2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.300e-22
Identity = 47/73 (64.38%), Postives = 63/73 (86.30%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +L+AA+ +GAGLST GLAG G+GIG+VFA L+L  + NP +KD++FR+A+LGFALTEAIALF LM+ FL+LF+
Sbjct:    2 LLQAAKFVGAGLSTMGLAGAGVGIGMVFASLVLGISRNPSMKDEMFRMAILGFALTEAIALFALMIVFLILFA 74
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A4Y5T8G9_9PHAE (ATP synthase subunit 9, mitochondrial n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T8G9_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 6.580e-22
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1 
Query:    7 EAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
             +AQ +GAGL+T GLAG G+GIG VF  L+L TA NP IK+DLFR A+LGFALTEAIALF LM+ FL+LFS
Sbjct:    4 RSAQLIGAGLATIGLAGAGVGIGTVFGALVLGTARNPSIKNDLFRFAILGFALTEAIALFALMMAFLILFS 74
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A649UBP4_AURAN (ATP synthase subunit 9, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A649UBP4_AURAN)

HSP 1 Score: 89.0 bits (219), Expect = 9.350e-22
Identity = 48/73 (65.75%), Postives = 61/73 (83.56%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +L+AA+ +GAGLST GL G G+GIG VFA L+L  + NP +KD+LFRVA+LGFALTEAIALF LM+ FL+LF+
Sbjct:    2 ILQAAKLIGAGLSTIGLVGAGVGIGSVFAALILGISRNPSLKDELFRVAILGFALTEAIALFALMMGFLILFA 74
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BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: A0A2U9GIF0_9STRA (ATP synthase subunit 9, mitochondrial n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2U9GIF0_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.680e-21
Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +L+AA+ +GAGL+T GLAG G+GIG VF  L++  + NP +KD++FR+A+LGFALTEAIALF LM+ FLVLF+
Sbjct:    2 LLQAAKCVGAGLATIGLAGAGVGIGTVFGALVIGISRNPSLKDEMFRMAILGFALTEAIALFALMIAFLVLFA 74
[Close]
BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Match: Q3S284_THAPS (ATP synthase subunit 9, mitochondrial n=16 Tax=Bacillariophyta TaxID=2836 RepID=Q3S284_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 1.550e-20
Identity = 44/73 (60.27%), Postives = 62/73 (84.93%), Query Frame = 1 
Query:    1 MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAMLGFALTEAIALFTLMVTFLVLFS 219
            +L+AA+ +GAGL+T GLAG G+GIG VF  L++  + NP +KD+LF++A+LGFALTEAIALF+LM+ FL+LF+
Sbjct:    2 LLQAAKFVGAGLATIGLAGAGVGIGTVFGALVIGVSRNPSLKDELFKLAILGFALTEAIALFSLMMAFLILFA 74
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig108.969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8MX70_9RICK4.770e-3589.04ATP synthase F(0) sector subunit c n=1 Tax=Rickett... [more]
Q9G908_OCHDN4.030e-2570.83ATP synthase subunit 9, mitochondrial n=1 Tax=Ochr... [more]
Q9MGA0_9STRA3.400e-2468.06ATP synthase subunit 9, mitochondrial n=2 Tax=cell... [more]
A0A0U2LTP8_9PHAE1.970e-2367.12ATP synthase subunit 9, mitochondrial n=153 Tax=St... [more]
D2Z269_HETAK2.300e-2267.12ATP synthase subunit 9, mitochondrial n=1 Tax=Hete... [more]
A0A2Z5ZBT2_9STRA2.300e-2264.38ATP synthase subunit 9, mitochondrial n=11 Tax=Bac... [more]
A0A4Y5T8G9_9PHAE6.580e-2269.01ATP synthase subunit 9, mitochondrial n=1 Tax=Ishi... [more]
A0A649UBP4_AURAN9.350e-2265.75ATP synthase subunit 9, mitochondrial n=3 Tax=cell... [more]
A0A2U9GIF0_9STRA7.680e-2161.64ATP synthase subunit 9, mitochondrial n=3 Tax=Euka... [more]
Q3S284_THAPS1.550e-2060.27ATP synthase subunit 9, mitochondrial n=16 Tax=Bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig108contigP-fluviatile_contig108:16008..16229 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score81.3
Seed ortholog evalue2.1e-13
Seed eggNOG ortholog588596.E2JE47
Preferred nameatp9
KEGG rclassRC00061
KEGG koko:K02128,ko:K03880
KEGG TC3.A.2.1,3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map05010,map05012,map05016
KEGG ModuleM00142,M00158
GOsGO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046907,GO:0046933,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.Belongs to the ATPase C chain family
EggNOG OGs3A3YG@33154,3P7BC@4751,COG0636@1,KOG3025@2759
EC1.6.5.3
COG Functional cat.P
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Hectar predicted targeting categorysignal anchor
Exons1
Model size222
Cds size222
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815424.2087517-CDS-P-fluviatile_contig108:16007..162291622815424.2087517-CDS-P-fluviatile_contig108:16007..16229Porterinema fluviatile SAG_2381CDSP-fluviatile_contig108 16008..16229 +
1693561802.465572-CDS-P-fluviatile_contig108:16007..162291693561802.465572-CDS-P-fluviatile_contig108:16007..16229Porterinema fluviatile SAG_2381CDSP-fluviatile_contig108 16008..16229 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig108.969.1prot_P-fluviatile_contig108.969.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig108 16008..16229 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig108.969.1

>prot_P-fluviatile_contig108.969.1 ID=prot_P-fluviatile_contig108.969.1|Name=mRNA_P-fluviatile_contig108.969.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=74bp
MLEAAQKLGAGLSTTGLAGCGLGIGLVFAGLLLSTALNPFIKDDLFRVAM
LGFALTEAIALFTLMVTFLVLFS*
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mRNA from alignment at P-fluviatile_contig108:16008..16229+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig108.969.1 ID=mRNA_P-fluviatile_contig108.969.1|Name=mRNA_P-fluviatile_contig108.969.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=222bp|location=Sequence derived from alignment at P-fluviatile_contig108:16008..16229+ (Porterinema fluviatile SAG_2381)
ATGTTAGAAGCAGCACAAAAATTAGGAGCAGGGTTAAGTACTACAGGATT
AGCAGGTTGTGGTTTAGGTATTGGTTTAGTTTTCGCAGGATTATTATTAT
CGACTGCTTTAAATCCTTTTATTAAAGATGACTTATTTAGAGTAGCTATG
TTAGGTTTTGCTTTAACAGAAGCTATTGCGTTATTTACTTTAATGGTAAC
ATTTTTAGTTTTATTCAGTTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig108:16008..16229+

>mRNA_P-fluviatile_contig108.969.1 ID=mRNA_P-fluviatile_contig108.969.1|Name=mRNA_P-fluviatile_contig108.969.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=444bp|location=Sequence derived from alignment at P-fluviatile_contig108:16008..16229+ (Porterinema fluviatile SAG_2381)
ATGTTAGAAGCAGCACAAAAATTAGGAGCAGGGTTAAGTACTACAGGATT
AGCAGGTTGTGGTTTAGGTATTGGTTTAGTTTTCGCAGGATTATTATTAT
CGACTGCTTTAAATCCTTTTATTAAAGATGACTTATTTAGAGTAGCTATG
TTAGGTTTTGCTTTAACAGAAGCTATTGCGTTATTTACTTTAATGGTAAC
ATTTTTAGTTTTATTCAGTTAAATGTTAGAAGCAGCACAAAAATTAGGAG
CAGGGTTAAGTACTACAGGATTAGCAGGTTGTGGTTTAGGTATTGGTTTA
GTTTTCGCAGGATTATTATTATCGACTGCTTTAAATCCTTTTATTAAAGA
TGACTTATTTAGAGTAGCTATGTTAGGTTTTGCTTTAACAGAAGCTATTG
CGTTATTTACTTTAATGGTAACATTTTTAGTTTTATTCAGTTAA
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