mRNA_P-fluviatile_contig102.947.1 (mRNA) Porterinema fluviatile SAG_2381
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: A0A6H5L612_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L612_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.010e-95 Identity = 209/356 (58.71%), Postives = 230/356 (64.61%), Query Frame = 1 Query: 1 DGDVDAADGGATGVAPMEVGDDSDGFGDFGAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKVAKQARKRKAAGTARVDSTQLGRWLTEPVLPCLDKFIENNRKLAAERAKNHEGSARQTPGKPAGVGSVADLAGPLSLLSKSKEGGFRVFKDIFLPQSNIDLLSLSGSDDKNLWGEEKNRLDTMKRLRKHYDLDHVFDPLDIDVELGRTRVRLEGGIIQKVKSFRSGQYILEDGTMIGQWELLSTRHGKGVTLEQDVARYIRQLAAVHTITLSQIVPYISGGDTTMTDGMLLDVDGGMERAAATGDKVDPVSNLPLDDLEVLKNKTERVRQLSLEIFTKASVQDLLP 1068
DG+VDAADGG TGV PM+VGDDSDGFGD G XXXXXXXXXXXXXX KVAKQ RK+KAAG RV +L RWLTEPVLPCLDKFI NRKLA +R K+HEGSA TPGKPAGVG + DLAGPLSLLSKSKEGGFRVFKD F P++NI+LLSLS D KNL GEEKNR KRLR HYDLD+VFDP+ +G KG T ++ A HT TLSQIVPYISGGD TM+DGMLLDVDGG+E A AT DK+D S L L +L+ +K KTERVRQLSLEIF KASVQDLLP
Sbjct: 537 DGEVDAADGGDTGVDPMKVGDDSDGFGDSGX----------------------XXXXXXXXXXXXXXXAKVAKQGRKQKAAGQKRVTGPKLARWLTEPVLPCLDKFIRTNRKLAKQRGKDHEGSAGHTPGKPAGVGYITDLAGPLSLLSKSKEGGFRVFKDTFFPRANINLLSLSEDDVKNLRGEEKNRWSKTKRLRAHYDLDYVFDPVGHRCGVGAD---------------------------------------KGSTRRREDPE-----GATHTTTLSQIVPYISGGDKTMSDGMLLDVDGGIEGAVATVDKIDSKSKLSLVNLQAIKTKTERVRQLSLEIFAKASVQDLLP 826
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: UPI0000161E59 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E59) HSP 1 Score: 184 bits (466), Expect = 2.140e-51 Identity = 109/285 (38.25%), Postives = 161/285 (56.49%), Query Frame = 1 Query: 217 KQARKRKAAGTARVDSTQLGRWLTEPVLPCLDKFIENNRKLAAERAKNHEGSARQTPGKPAGVGSVADLAGPLSLLSKSKEGGFRVFKDIFLPQSNIDLLSLSGSDDKNLWGEEKNRLDTMKRLRKHYDLDHVFDPLDIDVELGRTRVRLEGGIIQKVKSFRSGQYILEDG-TMIGQWELLSTRHGKGVTLEQDVARYIRQLAAVHTITLSQIVPYISGGDTTMTDGMLLDVDGGMERAAATGDKVDPVSNLPLDDLEVLKNKTERVRQLSLEIFTKASVQDLLP 1068
K AR K G + ST L + L EP+L C++ F+ENNR+ + E + +A + P KPAG G++AD A L++LS K+ + + ++ P+S+ ++ Y+LD+ FDP DI VE+GRT V G +Q V++F G Y L D + + QW++L RHG+GVTLEQD+ RYI QL + + S VP I D + DGM+LDV GG+ A + D +D +S L ++L +K T+RVR +LEIFT +SV+D+LP
Sbjct: 84 KTARVNKPVGQRGLRSTTLAQELEEPILACMEPFLENNRRASDELVEERRDTAPRAPNKPAGTGTIADAARFLAMLSHDKKDSIEIKEGVYFPRSS------------------------KSEIKSQYELDYAFDPSDIGVEVGRTTVTW-GNKVQTVEAFDYGIYTLGDKKSKLTQWDVLENRHGRGVTLEQDLRRYIGQLVLTYVVMQSTGVPEIEN-DGNVHDGMMLDVYGGLANAEKSLDGIDSLSQLGREELLRIKTDTDRVRDFALEIFTGSSVRDILP 342
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: A0A6H5L073_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L073_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.160e-46 Identity = 107/285 (37.54%), Postives = 160/285 (56.14%), Query Frame = 1 Query: 217 KQARKRKAAGTARVDSTQLGRWLTEPVLPCLDKFIENNRKLAAERAKNHEGSARQTPGKPAGVGSVADLAGPLSLLSKSKEGGFRVFKDIFLPQSNIDLLSLSGSDDKNLWGEEKNRLDTMKRLRKHYDLDHVFDPLDIDVELGRTRVRLEGGIIQKVKSFRSGQYILEDGTM-IGQWELLSTRHGKGVTLEQDVARYIRQLAAVHTITLSQIVPYISGGDTTMTDGMLLDVDGGMERAAATGDKVDPVSNLPLDDLEVLKNKTERVRQLSLEIFTKASVQDLLP 1068
K AR K G + ST L + L EP+LPC++ F+ENNR+ + E + +A +T KPAG G++AD A L++LS K+ G + + ++ P+S++ ++ Y+LD+ F+P I VE+G+T V +G + QKV++F G Y L D + QW++L R G GVTLEQD+ RYI QL + + S VP I D + DGM+LDVDG + RA D +D S L + L +K T++VR +L+IFT +SV+D+LP
Sbjct: 634 KTARVNKPVGQRGLRSTTLAQELEEPILPCMEPFLENNRRASDELVEERRDTAPRTKSKPAGAGTIADAARFLAMLSHDKKDGIEIKEGVYFPRSSLGA------------------------IKSQYELDYAFNPSHIGVEVGKTTVMWKGKV-QKVEAFDYGFYTLGDKEFKLTQWDVLENRRGSGVTLEQDLRRYIGQLVLTYVVMQSTGVPEIEN-DGNVHDGMMLDVDGALTRAEKNLDGIDRHSQLGKEKLLEIKKNTDKVRDFALKIFTSSSVRDILP 892
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: A0A6H5L6S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S7_9PHAE) HSP 1 Score: 107 bits (267), Expect = 9.000e-22 Identity = 62/162 (38.27%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 586 LRKHYDLDHVFDPLDIDVELGRTRVRLEGGIIQKVKSFRSGQYILEDGTMIGQWELLSTRHGKGVTLEQDVARYIRQLAAVHTITLSQIVPYISGGDTTMTDGMLLDVDGGMERAAATGDKVDPVSN-LPLDDLEVLKNKTERVRQLSLEIFTKASVQDLLP 1068
L+ ++D +++F+P I+V +G TRV+++G I V+SF G+Y L I QWELL R G+G TL+ ++ R+I Q A + + +++ VPY T+GML ++ +ERA A D +D SN + L++L L+ E++R LSLEIFT + + LP
Sbjct: 216 LKYYFDKNYMFNPASIEVVVGSTRVKIDGRIFV-VESFDHGKYNLAGHKPITQWELLQNRRGEGATLDDELRRFIIQQADDYVVMMARAVPYFHNCGIA-TEGMLWNIKEAVERARAHPDNIDVESNKMTLEELASLQEGHEKMRSLSLEIFTTLPLSETLP 375
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: D7FZA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA9_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.430e-20 Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 220 QARKRKAAGTARVDSTQLGRWLTEPVLPCLDKFIENNRKLAAERAKNHEGSARQTPGKPAGVGSVADLAGPL 435
Q R+R+A GT RVDST+LGRWLTEP LPC++ FI+ NRK+A ERAK+HEG+A TP +P GVG++ADLA PL
Sbjct: 553 QLRQRRAEGTTRVDSTELGRWLTEPFLPCMEAFIQQNRKIADERAKDHEGTAPTTPKRPVGVGTLADLANPL 624
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Match: D7FZ65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ65_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-14 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 565 RLDTMKRLRKHYDLDHVFDPLDIDVELG------RTRVRLEGGIIQKVKSFRSGQYILEDGTMIGQWELLSTRHGKGVTLEQDVARYIRQLAAVHTITLSQIVPYISGGDTTMTDGMLLDVDGGMER 927
R D + L + ++F+P I V L T+V + GG VKSF +G+Y LEDGT IGQWELL TR G GVTL+ + R++R L A +T +++ VP+ G M+ GML +VD + R
Sbjct: 291 RRDKLDELESAFSAAYMFNPSHIGVSLNPLDPLNETKVEI-GGRELVVKSFNTGKYTLEDGTEIGQWELLETRCGGGVTLDDECRRFVRFLVATYTAMMARGVPFERDGGN-MSGGMLWNVDDAITR 415 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig102.947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig102.947.1 >prot_P-fluviatile_contig102.947.1 ID=prot_P-fluviatile_contig102.947.1|Name=mRNA_P-fluviatile_contig102.947.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=356bp DGDVDAADGGATGVAPMEVGDDSDGFGDFGAGTGGGSWSDSDSDGEGGGAback to top mRNA from alignment at P-fluviatile_contig102:33226..34293- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig102.947.1 ID=mRNA_P-fluviatile_contig102.947.1|Name=mRNA_P-fluviatile_contig102.947.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1068bp|location=Sequence derived from alignment at P-fluviatile_contig102:33226..34293- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig102:33226..34293- >mRNA_P-fluviatile_contig102.947.1 ID=mRNA_P-fluviatile_contig102.947.1|Name=mRNA_P-fluviatile_contig102.947.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2136bp|location=Sequence derived from alignment at P-fluviatile_contig102:33226..34293- (Porterinema fluviatile SAG_2381)back to top |