mRNA_P-fluviatile_contig101.943.1 (mRNA) Porterinema fluviatile SAG_2381
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI) HSP 1 Score: 283 bits (725), Expect = 3.320e-90 Identity = 142/164 (86.59%), Postives = 151/164 (92.07%), Query Frame = 3 Query: 843 MGLIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSQGNAEGGPRVFQL 1334
MGLIGISP+ISPDLLVTLARMGHGDSICFADANFPSE+ PG+PGPIT+RADGHEVAPLL+AVSKLFPLD+YTEFPVQMMAAVPGDELD SIE RF AVEAEQPGMFKVERVERFAFYERARSCYAVV+TGETAKYGNIILVKGVLGVS +A GP +F L
Sbjct: 1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSENLTSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAGSGPAIFTL 164
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A7X7A4N1_9BACT (D-ribose pyranase n=2 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7A4N1_9BACT) HSP 1 Score: 163 bits (413), Expect = 2.210e-44 Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISP++SP+LL L RMGHGD I ADA+FP E+ G +RADG +A LL A+ LF LDSY + PV MMAAVPGD LDP++EA +R A++ PG + R++RFAFYERA++ YAVV TGETAKYGNI+L KGV
Sbjct: 2 LKGISPLLSPELLDALYRMGHGDEIVLADAHFPGETV------GKRVVRADGLRIADLLDAILPLFELDSYVDAPVVMMAAVPGDTLDPAVEAAYRAAIDRHAPGTPAIARIDRFAFYERAKAAYAVVMTGETAKYGNILLKKGV 140
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A7X1B4G5_9BACT (D-ribose pyranase n=1 Tax=Pelagicoccus albus TaxID=415222 RepID=A0A7X1B4G5_9BACT) HSP 1 Score: 163 bits (413), Expect = 2.280e-44 Identity = 90/149 (60.40%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVS 1295
LIGISP++SP+LL L RMGHGD I ADA+FP ES G + IRADG ++A LL A+S LFP D Y E P+ MM+AVPGDELDPS+E + ++ P ER+ERFAFYERARS YAVV TGETAKYGNIIL KGV V+
Sbjct: 2 LIGISPLLSPELLNALYRMGHGDEIVLADAHFPGESFN-----GNV-IRADGLKIADLLGAISPLFPFDEYVENPLGMMSAVPGDELDPSVEEGYLASIRKTYPDTKPSERIERFAFYERARSAYAVVMTGETAKYGNIILKKGVTPVA 144
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: UPI00177F087E (L-fucose mutarotase n=2 Tax=Pelagicoccus TaxID=455433 RepID=UPI00177F087E) HSP 1 Score: 162 bits (409), Expect = 8.910e-44 Identity = 89/150 (59.33%), Postives = 103/150 (68.67%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSQ 1298
LIGISPI+SP+LL L RMGHGD I ADA+FP ES IRADG ++A LL+ + LF LD Y + P+ MMAAVPGDELDPS+E + A+ P ER+ERFAFYERA+ YAVV TGETAKYGNIIL KGV VSQ
Sbjct: 2 LIGISPILSPELLNALYRMGHGDEIVLADAHFPGESF------NENVIRADGLKIAALLEGICPLFALDEYVDNPLAMMAAVPGDELDPSVENGYLAAIRQTWPETRPSERIERFAFYERAKKAYAVVMTGETAKYGNIILKKGVTPVSQ 145
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A7K3XDQ0_9BACT (D-ribose pyranase n=1 Tax=Mariniphaga sp. TaxID=1954475 RepID=A0A7K3XDQ0_9BACT) HSP 1 Score: 160 bits (406), Expect = 2.340e-43 Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISP+ISP+LL LARMGHGD I ADA+FP E+ P +RADG ++A LL A+ LF LD+Y P+ MMAAVPGD LDP +EA + +++ P + +E+VERFAFYERA+S +AVV TGETAKYGNIIL KGV
Sbjct: 2 LKGISPLISPELLSVLARMGHGDEIVLADAHFPGETF------NPRVLRADGLKIADLLSAILPLFELDAYAAHPIAMMAAVPGDALDPLVEASYLKSILETNPSVAPIEQVERFAFYERAKSAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706) HSP 1 Score: 160 bits (406), Expect = 2.410e-43 Identity = 88/145 (60.69%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISPIISPDLL LARMGHGD I FADA+FP ES +RADG + LL+AV LF LDSY P+ MMAAV GD LDP++E ++ +AV+ P + V+R+ERFAFYER RS +AVV TGETAKYGNIIL KGV
Sbjct: 2 LKGISPIISPDLLQILARMGHGDEIVFADAHFPGESFNSR------ILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A4U2LAJ6_9BACT (D-ribose pyranase n=1 Tax=Puteibacter caeruleilacunae TaxID=2528631 RepID=A0A4U2LAJ6_9BACT) HSP 1 Score: 160 bits (405), Expect = 3.360e-43 Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISP+ISP LL TLARMGHGD I ADA+FP+ES +RADG ++ LLQA+ LF LDSY E P+ MM AV GDELDP +E ++ +AVE P + VER+ERF+FY+RA+S +AVV TGET KYGNIIL KGV
Sbjct: 2 LKGISPLISPKLLETLARMGHGDEIILADAHFPAESF------NDNVLRADGIKIPDLLQAILPLFELDSYVENPLIMMQAVEGDELDPEVEKQYMKAVEQTNPQLTTVERIERFSFYDRAKSAFAVVMTGETVKYGNIILKKGV 140
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A7X7AX45_9BACT (D-ribose pyranase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7AX45_9BACT) HSP 1 Score: 159 bits (403), Expect = 6.330e-43 Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISP++SP+LL LARMGHGD I ADA+FP E+ G +RADG +A LL A+ LF LDSY + PV MMAAVPGD LDP++E +R ++ P + R+ERF FYERAR+ +AVV TGETAKYGN+IL KGV
Sbjct: 2 LKGISPLLSPELLAVLARMGHGDEIVLADAHFPGETF------GQRVLRADGLRIADLLDAILPLFELDSYVDAPVVMMAAVPGDTLDPAVEQAYRAVIDRHAPATPPIARIERFTFYERARAAFAVVMTGETAKYGNVILKKGV 140
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A350YV71_9BACT (D-ribose pyranase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A350YV71_9BACT) HSP 1 Score: 159 bits (402), Expect = 8.540e-43 Identity = 84/146 (57.53%), Postives = 103/146 (70.55%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVL 1286
L GISPIISP LL LARMGHGD I ADA+FP E+ IRADG +++ LL+A+ LF LDSY PV MM AVPGD+LDP++E + ++++ P + VERVERFAFY+R RS +AVV TGET KYGNIIL KGV+
Sbjct: 2 LKGISPIISPALLEVLARMGHGDEIVLADAHFPGETFNSR------VIRADGLKISSLLEAILPLFELDSYVPHPVAMMDAVPGDQLDPAVEETYLKSIQITHPSIHSVERVERFAFYDRTRSAFAVVMTGETTKYGNIILKKGVI 141
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Match: A0A3R8K112_9BACT (D-ribose pyranase n=2 Tax=Opitutaceae TaxID=134623 RepID=A0A3R8K112_9BACT) HSP 1 Score: 159 bits (402), Expect = 9.100e-43 Identity = 83/145 (57.24%), Postives = 101/145 (69.66%), Query Frame = 3 Query: 849 LIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIRADGHEVAPLLQAVSKLFPLDSYTEFPVQMMAAVPGDELDPSIEARFRQAVEAEQPGMFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 1283
L GISP+ISP+LL LARMGHGD I ADA+FP ES GR +RADG +APLL A+ LF +D+Y PV MMAAVPGD+LDP++EA + + P + R++RFAFYER RS AV+ TGETAKYGNI+L KGV
Sbjct: 2 LKGISPLISPELLAVLARMGHGDEIILADAHFPGESFIANGR----VLRADGLRIAPLLDAILPLFEIDAYVSDPVVMMAAVPGDQLDPAVEAAYLAPLRKHAPARATITRIDRFAFYERTRSAIAVLMTGETAKYGNILLKKGV 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig101.943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig101.943.1 >prot_P-fluviatile_contig101.943.1 ID=prot_P-fluviatile_contig101.943.1|Name=mRNA_P-fluviatile_contig101.943.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=165bp MGLIGISPIISPDLLVTLARMGHGDSICFADANFPSESTGCPGRPGPITIback to top mRNA from alignment at P-fluviatile_contig101:45582..48555- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig101.943.1 ID=mRNA_P-fluviatile_contig101.943.1|Name=mRNA_P-fluviatile_contig101.943.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2974bp|location=Sequence derived from alignment at P-fluviatile_contig101:45582..48555- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig101:45582..48555- >mRNA_P-fluviatile_contig101.943.1 ID=mRNA_P-fluviatile_contig101.943.1|Name=mRNA_P-fluviatile_contig101.943.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=990bp|location=Sequence derived from alignment at P-fluviatile_contig101:45582..48555- (Porterinema fluviatile SAG_2381)back to top |