Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 773 |
| Cds size | 477 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815421.518416-UTR-P-fluviatile_contig101:28005..28006 | 1622815421.518416-UTR-P-fluviatile_contig101:28005..28006 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 28006..28006 + |
| 1693561797.924118-UTR-P-fluviatile_contig101:28005..28006 | 1693561797.924118-UTR-P-fluviatile_contig101:28005..28006 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 28006..28006 + |
| 1622815421.5513942-UTR-P-fluviatile_contig101:29357..29652 | 1622815421.5513942-UTR-P-fluviatile_contig101:29357..29652 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 29358..29652 + |
| 1693561797.948276-UTR-P-fluviatile_contig101:29357..29652 | 1693561797.948276-UTR-P-fluviatile_contig101:29357..29652 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 29358..29652 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815421.5308733-CDS-P-fluviatile_contig101:28006..28044 | 1622815421.5308733-CDS-P-fluviatile_contig101:28006..28044 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 28007..28044 + |
| 1693561797.9316537-CDS-P-fluviatile_contig101:28006..28044 | 1693561797.9316537-CDS-P-fluviatile_contig101:28006..28044 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 28007..28044 + |
| 1622815421.5414755-CDS-P-fluviatile_contig101:28918..29357 | 1622815421.5414755-CDS-P-fluviatile_contig101:28918..29357 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 28919..29357 + |
| 1693561797.939712-CDS-P-fluviatile_contig101:28918..29357 | 1693561797.939712-CDS-P-fluviatile_contig101:28918..29357 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 28919..29357 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig101.941.1 >prot_P-fluviatile_contig101.941.1 ID=prot_P-fluviatile_contig101.941.1|Name=mRNA_P-fluviatile_contig101.941.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=159bp
MSYHRQPSNTCNRAKPDKPSDGIPAGVVRRGVMNVTSVDLSKVLKYEGKE
FITSDILAIIATEDGKVAPASGGAGAGAAELFGGQRRSSRNPQEHPLRTP
ALIVMTSEEHRQDILRGRGRASRGELGAGDVAAMHGSWQLLQGSLTDPVE
DVSSSEQW* back to topmRNA from alignment at P-fluviatile_contig101:28006..29652+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig101.941.1 ID=mRNA_P-fluviatile_contig101.941.1|Name=mRNA_P-fluviatile_contig101.941.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1647bp|location=Sequence derived from alignment at P-fluviatile_contig101:28006..29652+ (Porterinema fluviatile SAG_2381)
CATGTCCTATCATCGACAGCCTAGCAACACTTGCAACAGGTGCGTGCATG
CTCAACAGCAGTTACGCTTTCCCAACATTCATTCTTTTGCGGCCCTTTTT
CGTATCTGCAGTAGGACGACCGAACTTCCCCGTCGATGGTTTGTTACTGG
CTGTCGCATACCGAACACTCGCGGCCGTTGCGTGCGTGCTCAACAGGAGG
CGTGTTGTTCGATATTTCATTTTTTTCCGACGCCTCGATTGCAGTTTTGT
TTCTTCTTCTTGAACACGCACACGTGGACAGGAGTGCCGATAAAAAGAAG
AAGGAAGCCACCAACTGCAGGCTGTTGAGGCATCAAAAATGGGTAGGTCA
TCCAGCACCGAGTGGTTTCCCCTAGTGGATCCCCTCGCATCTTGCTGTTG
GTCGCGAGTGCTGCTTTTGTCCACCGATCTCTGCTTTTGCCCTGCCACGC
TATCTCTGCGCCTTGCCTTTTATCGCTCTTCTCCGATGGCATGCGTCCCC
CCACGCCTTGCCTGTGCGGACCTTTTCTTGTTGTCCCGCGTGGTCCTCGC
CCTCGCCGCCGGCTTGTTTGTTCTATTGCTCCTCTCTGCTGGCGTGCTCT
CCCGCCACCACGCGTCTTCCGTCCCTTTTAGCGTGGACCCTCTGCTCGAC
TTGCTCCGCCACACATCCTCTGCAAGCGGAGTGTGTTTTTATTTCATTCA
CAAAGGTGTTTTGTCGTCTTCTGTCGACGTCGGGTCGCCACCTTACTCGA
AAGACTCACGCGTCCCATCCTTCCAGTCACAAGTCGTCCGTGTTTTGGTT
TGTGTTTCTTGCGTGGGTACAACCTCTCTCACCCAGCTACGAACAAGGCC
TCACACCCTTCCTCCATCACCCACGTATCGTGTCGCTGCCACCAAAACCC
GATTGATTTACAGAGCTAAGCCCGACAAACCTTCCGATGGCATCCCAGCT
GGAGTGGTTCGTCGCGGCGTGATGAACGTGACTTCGGTCGACCTGTCGAA
AGTGCTTAAGTACGAAGGCAAAGAGTTCATAACGTCCGACATCCTTGCCA
TCATTGCAACGGAAGATGGTAAGGTCGCTCCGGCGAGTGGCGGGGCTGGC
GCCGGGGCGGCGGAGCTGTTTGGGGGGCAACGACGAAGTAGTCGGAACCC
GCAAGAGCATCCATTGCGTACACCGGCCCTTATCGTGATGACCAGCGAAG
AACACCGGCAAGACATTCTGCGCGGACGAGGGAGAGCAAGCCGTGGCGAG
CTAGGCGCAGGCGACGTCGCTGCGATGCATGGCTCGTGGCAGCTGCTGCA
AGGAAGCCTCACGGATCCCGTTGAGGATGTGAGCAGCAGCGAACAGTGGT
AGATTTGACCTATCTTTGGCACACGAAGCGCACACACAACGCGCGTGAGG
TTGGACGCCCGCATCGTGTTCATCCTTTGGATGTTTTTCCGTTGTTCGTG
TAGAGAGGTGTGTGAGCTGACTCTACTGTCTGTGGACGGAGCGCCGTTCG
GGGCGGGTACCATCAACGTCGACTCCAAGTGGAGCGGCATGTCAGACGAA
GCGGAAGGAAAATATACCCAGCTTCCCCCTCGCCGGCAGCAGATGCAAGC
CCACCGAGAGTTGTCCCTTGCGAAGGAGGCCACCAATGATTCCGAGA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig101:28006..29652+ >mRNA_P-fluviatile_contig101.941.1 ID=mRNA_P-fluviatile_contig101.941.1|Name=mRNA_P-fluviatile_contig101.941.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=954bp|location=Sequence derived from alignment at P-fluviatile_contig101:28006..29652+ (Porterinema fluviatile SAG_2381)
ATGTCCTATCATCGACAGCCTAGCAACACTTGCAACAGATGTCCTATCAT
CGACAGCCTAGCAACACTTGCAACAGAGCTAAGCCCGACAAACCTTCCGA
TGGCATCCCAGCTGGAGTGGTTCGTCGCGGCGTGATGAACGTGACTTCGG
TCGACCTGTCGAAAGTGCTTAAGTACGAAGGCAAAGAGTTCATAACGTCC
GACATCCTTGCCATCATTGCAACGGAAGATGGTAAGGTCGCTCCGGCGAG
TGGCGGGGCTGGCGCCGGGGCGGCGGAGCTGTTTGGGGGGCAACGACGAA
GTAGTCGGAACCCGCAAGAGCATCCATTGCGTACACCGGCCCTTATCGTG
ATGACCAGCGAAGAACACCGGCAAGACATTCTGCGCGGACGAGGGAGAGC
AAGCCGTGGCGAGCTAGGCGCAGGCGACGTCGCTGCGATGCATGGCTCGT
GGCAGCTGCTGCAAGGAAGCCTCACGGATCCCGTTGAGGATGTGAGCAGC
AGCGAACAGTGGTAGAGCTAAGCCCGACAAACCTTCCGATGGCATCCCAG
CTGGAGTGGTTCGTCGCGGCGTGATGAACGTGACTTCGGTCGACCTGTCG
AAAGTGCTTAAGTACGAAGGCAAAGAGTTCATAACGTCCGACATCCTTGC
CATCATTGCAACGGAAGATGGTAAGGTCGCTCCGGCGAGTGGCGGGGCTG
GCGCCGGGGCGGCGGAGCTGTTTGGGGGGCAACGACGAAGTAGTCGGAAC
CCGCAAGAGCATCCATTGCGTACACCGGCCCTTATCGTGATGACCAGCGA
AGAACACCGGCAAGACATTCTGCGCGGACGAGGGAGAGCAAGCCGTGGCG
AGCTAGGCGCAGGCGACGTCGCTGCGATGCATGGCTCGTGGCAGCTGCTG
CAAGGAAGCCTCACGGATCCCGTTGAGGATGTGAGCAGCAGCGAACAGTG
GTAG back to top
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