Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 319 |
| Cds size | 300 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815421.5839171-UTR-P-fluviatile_contig101:21744..21763 | 1622815421.5839171-UTR-P-fluviatile_contig101:21744..21763 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 21745..21763 + |
| 1693561797.9580958-UTR-P-fluviatile_contig101:21744..21763 | 1693561797.9580958-UTR-P-fluviatile_contig101:21744..21763 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig101 21745..21763 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815421.594232-CDS-P-fluviatile_contig101:21763..22063 | 1622815421.594232-CDS-P-fluviatile_contig101:21763..22063 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 21764..22063 + |
| 1693561797.9672348-CDS-P-fluviatile_contig101:21763..22063 | 1693561797.9672348-CDS-P-fluviatile_contig101:21763..22063 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig101 21764..22063 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig101.940.1 >prot_P-fluviatile_contig101.940.1 ID=prot_P-fluviatile_contig101.940.1|Name=mRNA_P-fluviatile_contig101.940.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=100bp
MKLPNLKFIINYCFNFFGINTVLKKGFGFIKKGYKESIARVLSIPLSEFL
NMVMPGVHRFLKWNLLIGFLSFLSGFIIGGLDSYFGPKFLGSIFFMFGLF back to topmRNA from alignment at P-fluviatile_contig101:21745..22063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig101.940.1 ID=mRNA_P-fluviatile_contig101.940.1|Name=mRNA_P-fluviatile_contig101.940.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=319bp|location=Sequence derived from alignment at P-fluviatile_contig101:21745..22063+ (Porterinema fluviatile SAG_2381)
CCTATTTAACTAAAGATAAATGAAATTACCTAACTTAAAATTTATTATTA
ACTATTGTTTTAATTTTTTTGGCATTAATACAGTATTAAAAAAAGGTTTT
GGTTTTATTAAAAAAGGGTATAAAGAATCTATTGCCCGGGTTCTAAGTAT
CCCACTCTCTGAATTTTTAAATATGGTAATGCCGGGTGTTCATAGGTTTT
TAAAATGGAACTTACTTATAGGGTTCCTTTCCTTTCTAAGTGGTTTCATA
ATCGGGGGGTTGGACTCCTATTTTGGCCCGAAATTTTTGGGCTCAATCTT
TTTTATGTTCGGTTTATTT back to topCoding sequence (CDS) from alignment at P-fluviatile_contig101:21745..22063+ >mRNA_P-fluviatile_contig101.940.1 ID=mRNA_P-fluviatile_contig101.940.1|Name=mRNA_P-fluviatile_contig101.940.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=600bp|location=Sequence derived from alignment at P-fluviatile_contig101:21745..22063+ (Porterinema fluviatile SAG_2381)
ATGAAATTACCTAACTTAAAATTTATTATTAACTATTGTTTTAATTTTTT
TGGCATTAATACAGTATTAAAAAAAGGTTTTGGTTTTATTAAAAAAGGGT
ATAAAGAATCTATTGCCCGGGTTCTAAGTATCCCACTCTCTGAATTTTTA
AATATGGTAATGCCGGGTGTTCATAGGTTTTTAAAATGGAACTTACTTAT
AGGGTTCCTTTCCTTTCTAAGTGGTTTCATAATCGGGGGGTTGGACTCCT
ATTTTGGCCCGAAATTTTTGGGCTCAATCTTTTTTATGTTCGGTTTATTT
ATGAAATTACCTAACTTAAAATTTATTATTAACTATTGTTTTAATTTTTT
TGGCATTAATACAGTATTAAAAAAAGGTTTTGGTTTTATTAAAAAAGGGT
ATAAAGAATCTATTGCCCGGGTTCTAAGTATCCCACTCTCTGAATTTTTA
AATATGGTAATGCCGGGTGTTCATAGGTTTTTAAAATGGAACTTACTTAT
AGGGTTCCTTTCCTTTCTAAGTGGTTTCATAATCGGGGGGTTGGACTCCT
ATTTTGGCCCGAAATTTTTGGGCTCAATCTTTTTTATGTTCGGTTTATTT back to top
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