mRNA_P-fluviatile_contig101.938.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-fluviatile_contig101.938.1
Unique Name	mRNA_P-fluviatile_contig101.938.1
Type	mRNA
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)

Homology

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: Q9XNR7_PYLLI (NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales TaxID=2877 RepID=Q9XNR7_PYLLI)

HSP 1 Score: 361 bits (927), Expect = 1.660e-125
Identity = 167/201 (83.08%), Postives = 183/201 (91.04%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGWF 603
            +LTI +NDL IW+KK STVIQACQ  GAQVPRFCYHDKL IAGNCRMCL+EVSKSPKPQASCALPF P LRIFTNTALVRKAQE+VMEL+LLHHPLDCPVCDQGGECELQEQSF+FGSDRG+FFFFKNS GD+FWG+ IKTVLRRC++CTRCVRYT QIGG + +GTSNRG +SEIGMFK+  LK ETSGGVIELCPVGW 
Sbjct:    1 MLTISVNDLVIWLKKGSTVIQACQVAGAQVPRFCYHDKLFIAGNCRMCLVEVSKSPKPQASCALPFLPGLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFFFKNSLGDTFWGSLIKTVLRRCVVCTRCVRYTHQIGGSDLIGTSNRGGHSEIGMFKENTLKTETSGGVIELCPVGWL 201

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: E6ZET3_ECTSI (NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales TaxID=2877 RepID=E6ZET3_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 3.010e-125
Identity = 167/201 (83.08%), Postives = 184/201 (91.54%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGWF 603
            +LTI INDL +WV+K STVIQACQA GAQVPRFCYHDKL +AGNCRMCL+EVSKSPKPQASCALPF P LRIFTNTALVRKAQE+VMEL+LLHHPLDCPVCDQGGECELQEQSF++GSDRG+F FFKNS GD+FWG+ IKTVLRRCILCTRCVRYT QIGG++ +GTSNRG +SEIGMFK+ VLK ETSGGVIELCPV W 
Sbjct:    1 MLTISINDLIVWVRKGSTVIQACQAAGAQVPRFCYHDKLFVAGNCRMCLVEVSKSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFLFFKNSLGDTFWGSLIKTVLRRCILCTRCVRYTHQIGGKDLIGTSNRGGHSEIGMFKESVLKTETSGGVIELCPVCWI 201

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: F8UWN5_9PHAE (NADH dehydrogenase subunit 11 n=73 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN5_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 2.990e-123
Identity = 165/201 (82.09%), Postives = 181/201 (90.05%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGWF 603
            +L I IN+L IWVKK STVIQACQA GA +PRFCYHDKL IAGNCRMCL+EVS SPKPQASCALPF P LRIFTNTALVRKAQE+VMEL+LLHHPLDCPVCDQGGECELQEQSF+FGSDRG+F FFKNS  D+FWG  IKTVLRRCI+CTRCVRYT QIGG +S+GTSNRG +SEIGMFK+ VLK+ETSGGVIELCPV W+
Sbjct:    1 MLNISINELLIWVKKGSTVIQACQAAGANIPRFCYHDKLFIAGNCRMCLVEVSNSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFLFFKNSLSDTFWGGLIKTVLRRCIVCTRCVRYTHQIGGNDSLGTSNRGGHSEIGMFKESVLKSETSGGVIELCPVSWY 201

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A8F0K0N1_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K0N1_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 4.780e-122
Identity = 161/200 (80.50%), Postives = 183/200 (91.50%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            ++ I IN+L +WVKK STVIQACQA GA++PRFCYHDKL +AGNCRMCL+EV+ +PKPQASCALPF P L+IFTN+ALVRKAQE VMEL+LLHHPLDCPVCDQGGECELQEQSF+FGSDRG+FFFFKNS GD+FWG+ IKTVLRRCI+CTRCVRYT QIGG +SVGTSNRGS+SEIGMFK+ +LK ETSGGVIELCPV W
Sbjct:    1 MINISINELLVWVKKGSTVIQACQAAGAKIPRFCYHDKLFVAGNCRMCLVEVNNAPKPQASCALPFMPNLKIFTNSALVRKAQEFVMELMLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFFFKNSLGDTFWGSLIKTVLRRCIVCTRCVRYTSQIGGNDSVGTSNRGSHSEIGMFKENILKTETSGGVIELCPVCW 200

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A2R4QQ95_9PHAE (NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ95_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 5.330e-119
Identity = 158/200 (79.00%), Postives = 178/200 (89.00%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            ++ I IN+L IWVKK STVIQACQ+ G ++PRFCYHDKL IAGNCRMCL+EV  +PKPQASCALPF P +RI+TNTALVRKAQE VMEL+LLHHPLDCPVCDQGGECELQEQSF++GSDRG+FFFFK S GD+FWG+ IKTVLRRCI+CTRCVRYT QIGG E++GTSNRG  SEIGMFK+ VLK ETSGGVIELCPV W
Sbjct:    1 MINISINELLIWVKKGSTVIQACQSAGVKIPRFCYHDKLFIAGNCRMCLVEVGNAPKPQASCALPFMPNMRIYTNTALVRKAQEFVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFFFKKSLGDTFWGSLIKTVLRRCIVCTRCVRYTYQIGGSEAIGTSNRGGSSEIGMFKESVLKTETSGGVIELCPVAW 200

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A0G2RLB7_TUROR (NADH dehydrogenase subunit 11 n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0G2RLB7_TUROR)

HSP 1 Score: 338 bits (867), Expect = 1.940e-116
Identity = 156/200 (78.00%), Postives = 174/200 (87.00%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            ++ I IN+L IWVKK STVIQAC+A G ++PRFCYHDKL IAGNCRMCL+EV  SPKPQASCALPF P +RIFTNTALV KAQE VME +LLHHPLDCPVCDQGGECELQEQSF++GSDRG+FFFFK S GD+FWG+ IKTVLRRCI+CTRCVRYT  IGG + +GTSNRG  SEIGMFK+ VLK ETSGGVIELCPV W
Sbjct:    1 MINITINELLIWVKKGSTVIQACEAAGVKIPRFCYHDKLFIAGNCRMCLVEVGNSPKPQASCALPFMPNMRIFTNTALVHKAQEFVMEFLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFFFKKSLGDTFWGSLIKTVLRRCIVCTRCVRYTSLIGGSDIIGTSNRGGNSEIGMFKENVLKTETSGGVIELCPVCW 200

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A8E8U4G1_9PHAE (Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4G1_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 6.870e-113
Identity = 153/200 (76.50%), Postives = 178/200 (89.00%), Query Frame = 1

Query:    1 LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            +++I IN++ +WVK+ STVIQACQAVGA +PRFCYHDKLSIAGNCRMCL+EV+ SPKPQASCALPF P LRIFT +ALVRKAQE VMELILL+HPLDCP+CDQGGECELQEQSFH+GSDRG+FFF KNS G + WG+FIKTVLRRCILCTRCVRYT QIGG +++G S+RGS SEI +FK  V+K+E SGGVI+LCPV W
Sbjct:    1 MISIHINEIIVWVKRGSTVIQACQAVGAIIPRFCYHDKLSIAGNCRMCLVEVNNSPKPQASCALPFLPGLRIFTTSALVRKAQEFVMELILLNHPLDCPICDQGGECELQEQSFHYGSDRGRFFFPKNSLGGALWGSFIKTVLRRCILCTRCVRYTSQIGGIDALGVSSRGSQSEITIFKGSVVKSEISGGVIDLCPVCW 200

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A4Y5T8Q6_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Q6_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.640e-107
Identity = 142/198 (71.72%), Postives = 167/198 (84.34%), Query Frame = 1

Query:   10 IFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGWF 603
            I IN+L +WVKK STV+QAC+AVG ++PRFCYH KL +AGNCRMCL+EV  SPKPQ SCALPF P + IFTN+ALV+KA+E VME +LL+HPLDCP+CDQGGEC+LQEQSFHFGSDRG+FFF K+S  D+FWG+ +KTV+RRCI+CTRCVRYT+ IGG   VGT NRG  SEIG F +  LK E SGGVIELCPVGWF
Sbjct:    3 IIINNLVVWVKKGSTVLQACEAVGEEIPRFCYHKKLFLAGNCRMCLVEVGNSPKPQVSCALPFVPNMSIFTNSALVKKAREGVMEFLLLNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFFTKSSVVDTFWGSLVKTVMRRCIVCTRCVRYTELIGGSGVVGTVNRGGQSEIGTFVETSLKTEVSGGVIELCPVGWF 200

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BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: Q2TUA0_DICDH (NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA0_DICDH)

HSP 1 Score: 308 bits (789), Expect = 1.280e-104
Identity = 139/197 (70.56%), Postives = 165/197 (83.76%), Query Frame = 1

Query:   10 IFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            I IN+L +WVK  STV+QAC+A G +VPRFCYH+KL IAGNCRMCL+EV  SPKPQ SCALPF P + IFT +ALVRKA+E VME IL++HPLDCP+CDQGGEC+LQEQSFHFGSDRG+FFF KNS+ D+FWG  +KTV++RCI+CTRCVRY+  +GG   VGT+NRG  SEIGMF +  LK E SGGVI+LCPVGW
Sbjct:    3 ITINNLVVWVKGGSTVLQACEAAGEEVPRFCYHEKLLIAGNCRMCLVEVGNSPKPQVSCALPFIPNMSIFTESALVRKAREGVMEFILVNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFFLKNSSVDTFWGALVKTVMKRCIVCTRCVRYSDLVGGTGIVGTTNRGVNSEIGMFVETSLKTEVSGGVIDLCPVGW 199

[Close]

BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Match: A0A8F0FDA4_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDA4_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.270e-102
Identity = 138/197 (70.05%), Postives = 161/197 (81.73%), Query Frame = 1

Query:   10 IFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLIEVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPVCDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCTRCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW 600
            I IN+L IWVKK STV+QAC+A+G ++PRFCYH KL IAGNCRMC +EV  SPKPQ SCALPF P + I TN++LVRKA+E+V+E ILL+HPLDCPVCDQGGEC+LQEQ+FHFGSDRG+FFF KNS GD+FWG  IKT++RRCILCTRC+RY   I G   VG +NRG YS IG F +  L  E SGGVIELCPVGW
Sbjct:    3 IIINNLIIWVKKGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCALPFLPNMSILTNSSLVRKARESVLEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSIGDTFWGLLIKTIMRRCILCTRCIRYLDLIAGFFLVGVTNRGGYSGIGTFIENFLGTEISGGVIELCPVGW 199

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig101.938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

0


Match Name	E-value	Identity	Description
Q9XNR7_PYLLI	1.660e-125	83.08	NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales...	[more]
E6ZET3_ECTSI	3.010e-125	83.08	NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales...	[more]
F8UWN5_9PHAE	2.990e-123	82.09	NADH dehydrogenase subunit 11 n=73 Tax=Phaeophycea...	[more]
A0A8F0K0N1_9PHAE	4.780e-122	80.50	NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia ...	[more]
A0A2R4QQ95_9PHAE	5.330e-119	79.00	NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=...	[more]
A0A0G2RLB7_TUROR	1.940e-116	78.00	NADH dehydrogenase subunit 11 n=24 Tax=Sargassacea...	[more]
A0A8E8U4G1_9PHAE	6.870e-113	76.50	Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID...	[more]
A0A4Y5T8Q6_9PHAE	1.640e-107	71.72	NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris...	[more]
Q2TUA0_DICDH	1.280e-104	70.56	NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dic...	[more]
A0A8F0FDA4_9PHAE	1.270e-102	70.05	NADH dehydrogenase subunit 11 n=1 Tax=Protohalopte...	[more]

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Properties


Property Name	Value
Taxonomic scope	Metazoa
Seed ortholog score	245.0
Seed ortholog evalue	3.1e-62
Seed eggNOG ortholog	51511.ENSCSAVP00000008534
Preferred name	NDUFS1
KEGG rclass	RC00061
KEGG ko	ko:K03934
KEGG TC	3.D.1.6
KEGG Reaction	R11945
KEGG Pathway	ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG Module	M00143
GOs	GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005758,GO:0005759,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0010257,GO:0012501,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042391,GO:0042773,GO:0042775,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0048037,GO:0050136,GO:0051536,GO:0051540,GO:0051881,GO:0055086,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0072593,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.	2 iron, 2 sulfur cluster binding
EggNOG OGs	38DHR@33154,3BE04@33208,3CT34@33213,482GT@7711,COG1034@1,KOG2282@2759
EC	1.6.5.3,1.6.99.3
COG Functional cat.	C
Best tax level	Chordata
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000
Hectar predicted targeting category	other localisation
Exons	1
Model size	609
Cds size	609
Stop	1
Start	0

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-fluviatile_contig101:17694..18302-
coding sequence from alignment at P-fluviatile_contig101:17694..18302-

protein sequence of mRNA_P-fluviatile_contig101.938.1

>prot_P-fluviatile_contig101.938.1 ID=prot_P-fluviatile_contig101.938.1|Name=mRNA_P-fluviatile_contig101.938.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=203bp
LLTIFINDLCIWVKKSSTVIQACQAVGAQVPRFCYHDKLSIAGNCRMCLI
EVSKSPKPQASCALPFFPKLRIFTNTALVRKAQEAVMELILLHHPLDCPV
CDQGGECELQEQSFHFGSDRGKFFFFKNSAGDSFWGNFIKTVLRRCILCT
RCVRYTKQIGGRESVGTSNRGSYSEIGMFKDKVLKNETSGGVIELCPVGW
FI*

mRNA from alignment at P-fluviatile_contig101:17694..18302-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-fluviatile_contig101.938.1 ID=mRNA_P-fluviatile_contig101.938.1|Name=mRNA_P-fluviatile_contig101.938.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=609bp|location=Sequence derived from alignment at P-fluviatile_contig101:17694..18302- (Porterinema fluviatile SAG_2381)
TTGCTTACTATTTTTATTAATGATCTTTGTATTTGGGTTAAAAAAAGTTC
GACTGTAATACAAGCTTGTCAAGCTGTAGGAGCTCAGGTTCCTCGGTTTT
GTTATCATGATAAGCTTTCTATTGCTGGTAATTGTCGTATGTGCTTAATA
GAGGTTAGTAAATCTCCAAAACCTCAAGCATCATGCGCTTTACCATTTTT
TCCTAAATTAAGAATTTTTACCAATACAGCTCTGGTACGTAAAGCTCAAG
AAGCTGTTATGGAGTTAATTCTTTTACATCATCCTTTGGACTGTCCTGTT
TGTGATCAGGGGGGGGAATGTGAACTTCAGGAGCAAAGTTTTCATTTTGG
CTCCGATAGAGGTAAATTTTTCTTTTTTAAAAATTCGGCAGGGGACAGCT
TTTGGGGTAATTTTATTAAAACAGTGCTACGCCGTTGTATACTTTGTACA
AGATGTGTTCGTTACACCAAACAAATTGGTGGTAGGGAATCGGTTGGTAC
ATCAAATAGGGGAAGTTATTCAGAAATCGGAATGTTTAAAGATAAGGTGC
TTAAGAACGAAACTTCTGGTGGAGTTATTGAGTTATGCCCTGTAGGTTGG
TTTATATAA

Coding sequence (CDS) from alignment at P-fluviatile_contig101:17694..18302-

>mRNA_P-fluviatile_contig101.938.1 ID=mRNA_P-fluviatile_contig101.938.1|Name=mRNA_P-fluviatile_contig101.938.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1218bp|location=Sequence derived from alignment at P-fluviatile_contig101:17694..18302- (Porterinema fluviatile SAG_2381)
TTGCTTACTATTTTTATTAATGATCTTTGTATTTGGGTTAAAAAAAGTTC
GACTGTAATACAAGCTTGTCAAGCTGTAGGAGCTCAGGTTCCTCGGTTTT
GTTATCATGATAAGCTTTCTATTGCTGGTAATTGTCGTATGTGCTTAATA
GAGGTTAGTAAATCTCCAAAACCTCAAGCATCATGCGCTTTACCATTTTT
TCCTAAATTAAGAATTTTTACCAATACAGCTCTGGTACGTAAAGCTCAAG
AAGCTGTTATGGAGTTAATTCTTTTACATCATCCTTTGGACTGTCCTGTT
TGTGATCAGGGGGGGGAATGTGAACTTCAGGAGCAAAGTTTTCATTTTGG
CTCCGATAGAGGTAAATTTTTCTTTTTTAAAAATTCGGCAGGGGACAGCT
TTTGGGGTAATTTTATTAAAACAGTGCTACGCCGTTGTATACTTTGTACA
AGATGTGTTCGTTACACCAAACAAATTGGTGGTAGGGAATCGGTTGGTAC
ATCAAATAGGGGAAGTTATTCAGAAATCGGAATGTTTAAAGATAAGGTGC
TTAAGAACGAAACTTCTGGTGGAGTTATTGAGTTATGCCCTGTAGGTTGG
TTTATATAATTGCTTACTATTTTTATTAATGATCTTTGTATTTGGGTTAA
AAAAAGTTCGACTGTAATACAAGCTTGTCAAGCTGTAGGAGCTCAGGTTC
CTCGGTTTTGTTATCATGATAAGCTTTCTATTGCTGGTAATTGTCGTATG
TGCTTAATAGAGGTTAGTAAATCTCCAAAACCTCAAGCATCATGCGCTTT
ACCATTTTTTCCTAAATTAAGAATTTTTACCAATACAGCTCTGGTACGTA
AAGCTCAAGAAGCTGTTATGGAGTTAATTCTTTTACATCATCCTTTGGAC
TGTCCTGTTTGTGATCAGGGGGGGGAATGTGAACTTCAGGAGCAAAGTTT
TCATTTTGGCTCCGATAGAGGTAAATTTTTCTTTTTTAAAAATTCGGCAG
GGGACAGCTTTTGGGGTAATTTTATTAAAACAGTGCTACGCCGTTGTATA
CTTTGTACAAGATGTGTTCGTTACACCAAACAAATTGGTGGTAGGGAATC
GGTTGGTACATCAAATAGGGGAAGTTATTCAGAAATCGGAATGTTTAAAG
ATAAGGTGCTTAAGAACGAAACTTCTGGTGGAGTTATTGAGTTATGCCCT
GTAGGTTGGTTTATATAA