mRNA_P-fluviatile_contig101.936.1 (mRNA) Porterinema fluviatile SAG_2381
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE) HSP 1 Score: 293 bits (750), Expect = 1.050e-92 Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 2 Query: 89 RGTLVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSRLLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRMQESFA 604
RGTLVLVHRDELV+QAVASF KFLPHLSVGVEKG ETAH GLDVVVASVQTLGRRGSG ARLRK+A++ GVV+VDEAHH+KAGG YDDVLNGLGVGSAC G TR RLLAGFTATPRRADGLSLRPFFD SIGGLDL WGIANGYLVDIHA+ V+T TDIAALPTRMQ+ A
Sbjct: 66 RGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGNETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSA 237
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI) HSP 1 Score: 151 bits (381), Expect = 4.340e-37 Identity = 74/87 (85.06%), Postives = 77/87 (88.51%), Query Frame = 2 Query: 344 YDDVLNGLGVGSACGGYTRDSRLLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRMQESFA 604
YDDVLNGLGVGSAC G TR RLLAGFTATPRRADGLSLRPFFD SIGGLDL WGIANGYLVDIHA+ V+T TDIAALPTRMQ+ A
Sbjct: 2 YDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSA 88
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: D8LIE3_ECTSI (ResIII domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE3_ECTSI) HSP 1 Score: 134 bits (338), Expect = 2.090e-34 Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = 2 Query: 89 RGTLVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEA 319
RGTLVLVHRDELV+QAVASF KFLPHLSVGVEKGPETAH GLDVVVASVQTLGRRGSG ARL+ +AD+AGVV+VDE+
Sbjct: 85 RGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLQNFADYAGVVVVDES 161
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A835YHM4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.370e-33 Identity = 100/201 (49.75%), Postives = 119/201 (59.20%), Query Frame = 2 Query: 74 FPSSA-RGTLVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLG-RRGSG-TARLRKYADFA-GVVIVDEAHHIKAGGTYDDVLNG-----------------LGVGSACGGYTRDSRLLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRMQESFAPPG 613
FP A RGTLVLVHR+ELVRQA A + L VG+E E + D VVASVQTLG RRG+G ARLR+ + G+VIVDEAHH+ G Y+ +LNG LG+GS CGG TR L+AGFTATP RADG +L PFFD LDL WGI G+LV+I +V T T +A L R Q + G
Sbjct: 63 FPELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNI---IVDTDT-LACLRRRGQTTLRCSG 257
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A3A5ANM4_9DELT (DEAD/DEAH box helicase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5ANM4_9DELT) HSP 1 Score: 99.8 bits (247), Expect = 4.540e-19 Identity = 70/170 (41.18%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 98 LVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSR-LLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRMQESFA 604
LVL HR EL+ QA P L V V++ TA P DVVVASV TLGR GS + R D +++VDEAHH A TY VL+ GV ++ D+R L GFTATP+R DG+ L F + L I G+L + Y V+T D++ + TRM + A
Sbjct: 53 LVLAHRGELLDQARDKIRAVNPALRVEVDQADRTADPDCDVVVASVPTLGREGSSRLK-RLNPDRFFLIVVDEAHHATAS-TYKLVLDYFGV------FSPDTRKLCVGFTATPKRGDGVGLDAVFQEIVFSRSLPEMIQAGFLSPVAGYRVETEIDLSRVKTRMGDFVA 214
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A445N132_9DELT (DEAD/DEAH box helicase n=1 Tax=uncultured Desulfobacterium sp. TaxID=201089 RepID=A0A445N132_9DELT) HSP 1 Score: 99.4 bits (246), Expect = 6.270e-19 Identity = 72/175 (41.14%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 71 RFPSSARGTLVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKY-ADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSR-LLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRM 589
R+ + LVL HR EL+ QA + P+L+V VE+ TA P DVVVASV TLGR+GS RL D +++VDEAHH A T+ VL L V + ++R LL GFTATP+R DG+ L F + L I G+L + AY V+T D++ + TRM
Sbjct: 53 RYFKMKKQMLVLAHRAELLDQACEKIRRANPYLTVAVEQADRTADPECDVVVASVPTLGRKGS--RRLTGLDPDRFFLIVVDEAHHATAD-TFKRVLKYLDV------FMPETRKLLVGFTATPKRGDGVGLDAVFQEIVYSRSLPEMIKAGHLSPVAAYRVETDIDLSRVKTRM 218
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A6J4XIT3_9DELT (DNA helicase, phage associated Type III restriction enzme n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XIT3_9DELT) HSP 1 Score: 99.0 bits (245), Expect = 8.460e-19 Identity = 69/164 (42.07%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 98 LVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSRLLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRM 589
LVL HR EL+ QA P L + VE+ A P DVVVASV TLGRRGS + F +++VDEAHH A TY VL GV A ++LL GFTATP+R DG L F + L I YL + AY V+T D++ + TRM
Sbjct: 63 LVLAHRSELLEQACDKIRCTNPDLKIAVEQAGRIADPACDVVVASVPTLGRRGSKRLQRLDPNRFF-LIVVDEAHHATAA-TYKRVLEYFGVFEA-----DTAKLLVGFTATPKRGDGQGLDAVFQEIVFSRSLPEMIHAKYLAPVAAYRVETDIDLSRVKTRM 219
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A848YTS4_9DELT (DEAD/DEAH box helicase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848YTS4_9DELT) HSP 1 Score: 97.8 bits (242), Expect = 2.090e-18 Identity = 67/165 (40.61%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 98 LVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSR-LLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRM 589
LVL HR EL+ QA + P L V +E+ A P DVVVASV TLGR+GS R D +++VDEAHH A TY VLN GV + D++ L+ GFTATP+R DG L + D+ IA YL + Y V+T D++ + RM
Sbjct: 68 LVLAHRQELLDQAREKIRRANPDLRVEIEQAGRKADPDCDVVVASVPTLGRKGSRRLS-RMDPDRFYLIVVDEAHHSTAA-TYKRVLNHFGV------FDEDTKKLVVGFTATPKRGDGQGLEAVYQEITFSRDISEMIAANYLAPLAGYRVETDVDLSRVRRRM 224
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A3A4WIB9_9DELT (DEAD/DEAH box helicase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4WIB9_9DELT) HSP 1 Score: 97.8 bits (242), Expect = 2.100e-18 Identity = 67/165 (40.61%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 98 LVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYADFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSR-LLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTRM 589
LVL HR EL+ QA P L V +E+ TA P DVVVASV TLGR+GS + F +++VDEAHH A TY VL + + D+R LL GFTATP+R DG L F+ + L I G+L + Y V+T D++ + TRM
Sbjct: 63 LVLAHRGELLEQACKKIRAANPELKVEIEQADRTADPDADVVVASVPTLGRKGSKRLKRLDPERFF-LIVVDEAHHAIAS-TYKHVLEHFQL------FAPDTRKLLVGFTATPKRGDGEGLDAVFEEIVFSRSLPEMIQAGFLSPVAGYRVETEIDLSRVKTRM 219
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Match: A0A1W1VSQ2_9THEO (Helicase conserved C-terminal domain-containing protein n=2 Tax=Thermanaeromonas TaxID=202949 RepID=A0A1W1VSQ2_9THEO) HSP 1 Score: 97.1 bits (240), Expect = 3.710e-18 Identity = 70/165 (42.42%), Postives = 89/165 (53.94%), Query Frame = 2 Query: 95 TLVLVHRDELVRQAVASFEKFLPHLSVGVEKGPETAHPGLDVVVASVQTLGRRGSGTARLRKYA-DFAGVVIVDEAHHIKAGGTYDDVLNGLGVGSACGGYTRDSRLLAGFTATPRRADGLSLRPFFDRSIGGLDLQWGIANGYLVDIHAYVVKTATDIAALPTR 586
TLVL HRDELVRQA F P SVG+ K E H G DVV+ASVQTL R RL +++ + G ++VDEAHH A TY V + LG G +LL G TAT R DG+ L F++ + I GYLVD+ A V++ DI+ + R
Sbjct: 51 TLVLAHRDELVRQAADKFGMVWPEASVGIVKAQEDDHQGRDVVIASVQTLSRE----ERLSRFSPERFGFLVVDEAHHAVAP-TYLRVFDRLGFMGGDPG-----KLLLGVTATGFRGDGIGLGRVFEKITFQRSVIALIRAGYLVDVKALAVRSQVDISEVTIR 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig101.936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig101.936.1 >prot_P-fluviatile_contig101.936.1 ID=prot_P-fluviatile_contig101.936.1|Name=mRNA_P-fluviatile_contig101.936.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=215bp TRRLLVPLATGPGKTVVFTHLSQAIPELCERDSGAGASRRARAAGGGLLRback to top mRNA from alignment at P-fluviatile_contig101:7316..13054+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig101.936.1 ID=mRNA_P-fluviatile_contig101.936.1|Name=mRNA_P-fluviatile_contig101.936.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5739bp|location=Sequence derived from alignment at P-fluviatile_contig101:7316..13054+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig101:7316..13054+ >mRNA_P-fluviatile_contig101.936.1 ID=mRNA_P-fluviatile_contig101.936.1|Name=mRNA_P-fluviatile_contig101.936.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1290bp|location=Sequence derived from alignment at P-fluviatile_contig101:7316..13054+ (Porterinema fluviatile SAG_2381)back to top |