mRNA_P-fluviatile_contig100.933.1 (mRNA) Porterinema fluviatile SAG_2381
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig100.933.1 vs. uniprot
Match: A0A6H5KR47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR47_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.060e-20 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = -2 Query: 402 MTEGVASWVLLDSLDGRSLVVFPRCCMYHVSDLLIECWTIAT 527
MTEGVASWVLLDS+ GRSLVVFPRCCMYHVSDLLIECWTIAT
Sbjct: 1 MTEGVASWVLLDSIYGRSLVVFPRCCMYHVSDLLIECWTIAT 42
BLAST of mRNA_P-fluviatile_contig100.933.1 vs. uniprot
Match: A0A6H5KPI8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI8_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.110e-20 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -2 Query: 399 MTEGVASWVLLDSLDGRSLVVFPRCCMYHVSDLLIECWTIATC 527
MTEGVASWVLLDSL GRSLV+FPRCCMYHVSDLLI CWTIATC
Sbjct: 1 MTEGVASWVLLDSLYGRSLVMFPRCCMYHVSDLLIGCWTIATC 43
BLAST of mRNA_P-fluviatile_contig100.933.1 vs. uniprot
Match: A0A6H5KJD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD2_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 5.730e-18 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = -2 Query: 402 MTEGVASWVLLDSLDGRSLVVFPRCCMYHVSDLLIECWTIAT 527
MTEGVASWVLLDS+ GRSLVVFPRCCMYHVSDLLIECWTIAT
Sbjct: 1 MTEGVASWVLLDSIYGRSLVVFPRCCMYHVSDLLIECWTIAT 42
BLAST of mRNA_P-fluviatile_contig100.933.1 vs. uniprot
Match: A0A6H5K4P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P9_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.280e-17 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = -2 Query: 402 MTEGVASWVLLDSLDGRSLVVFPRCCMYHVSDLLIECWTIAT 527
MTEGVASWVLLDS+ GR+LVVFPRCCMYHVSDLLIECWTIAT
Sbjct: 1 MTEGVASWVLLDSIYGRTLVVFPRCCMYHVSDLLIECWTIAT 42 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig100.933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig100.933.1 >prot_P-fluviatile_contig100.933.1 ID=prot_P-fluviatile_contig100.933.1|Name=mRNA_P-fluviatile_contig100.933.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=148bp MHLISTVRSLNNTDDTLHAVCPPFLNTCLVVGDDFIRPLQCAKQRARVAFback to top mRNA from alignment at P-fluviatile_contig100:18419..19000+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig100.933.1 ID=mRNA_P-fluviatile_contig100.933.1|Name=mRNA_P-fluviatile_contig100.933.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=582bp|location=Sequence derived from alignment at P-fluviatile_contig100:18419..19000+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig100:18419..19000+ >mRNA_P-fluviatile_contig100.933.1 ID=mRNA_P-fluviatile_contig100.933.1|Name=mRNA_P-fluviatile_contig100.933.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=888bp|location=Sequence derived from alignment at P-fluviatile_contig100:18419..19000+ (Porterinema fluviatile SAG_2381)back to top |