mRNA_P-fluviatile_contig10.928.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Match: D8LMP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMP3_ECTSI) HSP 1 Score: 295 bits (754), Expect = 3.300e-85 Identity = 295/314 (93.95%), Postives = 307/314 (97.77%), Query Frame = 1
Query: 430 RGDLESVQKYIATGGDLERTDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNVTDETGAKPGDVFHDAVSMSQRFEIKKLIRQRYNLMAEGFRSTRAAFVKVWLELEKKNMDQAQSELEVELLWGQLERREKELNMSKIGARDLGHAVKQLKTALETNRTTIREKNARIKALEERLANATITS 1371
RGDLESVQKYIATGGDLER DWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP + DETGAKPGDVFHD V MSQRFEIKKLIRQRYNLMAEGFR+TRAA+VKVW++LE+KNMDQAQS LEVELLWGQLERREKELNMSK+GARDLGHAVKQLKTALETNRTTIREKN+RIKALEERLAN ++++
Sbjct: 86 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGLMDETGAKPGDVFHDGVGMSQRFEIKKLIRQRYNLMAEGFRNTRAAYVKVWMDLERKNMDQAQSALEVELLWGQLERREKELNMSKVGARDLGHAVKQLKTALETNRTTIREKNSRIKALEERLANLSVSA 399
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Match: D7FY56_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY56_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 9.240e-16 Identity = 198/316 (62.66%), Postives = 239/316 (75.63%), Query Frame = 1
Query: 352 GMASVPPGGANGANKGSGVDIHGAVERGDLESVQKYIATGGDLERTDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNVTDETGAKPGDVFHDAVSMSQRFEIKKLIRQRYNLMAEGFRSTRAAFVKVWLELEKKNMDQAQSELEVELLWGQLERREKELNMSKIGARDLGHAVKQLKTALETNR 1299
G + PGG G+ +DIH AV + +++Y+ GGDL+R D +N LHIA AG F V + L+ A ++ ++I H XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +E K G+ F V +Q+ +IK L+++R L+ +G+ + R +++ E+ +++ S+ EVE LWG+L +REKELNMSK+GARDL HAVK +K+ALE R
Sbjct: 2 GSKAEEPGGGGGS-----IDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPLHIAAAGGFCNVVEFLLMHKAGVDVTSKIGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGR 312
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Match: A0A6H5JR84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR84_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 3.620e-15 Identity = 196/316 (62.03%), Postives = 239/316 (75.63%), Query Frame = 1
Query: 352 GMASVPPGGANGANKGSGVDIHGAVERGDLESVQKYIATGGDLERTDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNVTDETGAKPGDVFHDAVSMSQRFEIKKLIRQRYNLMAEGFRSTRAAFVKVWLELEKKNMDQAQSELEVELLWGQLERREKELNMSKIGARDLGHAVKQLKTALETNR 1299
G + PGG G+ +DIH AV + +++Y+ GGDL++ D +N LHIA AG F V + L+ A ++ ++I H XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +E K G+ F + +Q+ +IK L+++R L+ +G+ + R +++ E+ +++ S+ EVE LWG+L +REKELNMSK+GARDL HAVK +K+ALE R
Sbjct: 2 GSKAEEPGGGGGS-----IDIHLAVAHNREDQIKQYVDAGGDLDKRDGNNLAPLHIAAAGGFCNVVEFLLKHKAGVDVTSKIGHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEENVKAGETFLPEIPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGR 312
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Match: A0A835YKV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKV0_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.540e-8 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 979 VTDETGAKPGDVFHDAVSMSQRFEIKKLIRQRYNLMAEGFRSTRAAFVKVWLELEKKNM 1155
V D G KP + F D V ++ RFEIKKL+RQR LMAEG+ R +V +W E+E KNM
Sbjct: 80 VVDAAGTKPAETFSDKVPVASRFEIKKLVRQRPVLMAEGYSELRRRYVVMWKEVEAKNM 138
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Match: A0A0S7YJC2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium DG_20 TaxID=1703413 RepID=A0A0S7YJC2_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 3.420e-5 Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 406 VDIHGAVERGDLESVQKYIATGGDLERT------DWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEH 603
+DI A RG++ + ++Y+A GGD++ T T LHIA VAQLLI ANLNAK R EH
Sbjct: 1 MDIWTAASRGNVRAARRYLAAGGDVDATVDAPGIPVSGATPLHIAVLCDQGDVAQLLIENRANLNAKARDEH 72 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.928.1 >prot_P-fluviatile_contig10.928.1 ID=prot_P-fluviatile_contig10.928.1|Name=mRNA_P-fluviatile_contig10.928.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=365bp MASVPPGGANGANKGSGVDIHGAVERGDLESVQKYIATGGDLERTDWDNCback to top mRNA from alignment at P-fluviatile_contig10:3743609..3755896- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.928.1 ID=mRNA_P-fluviatile_contig10.928.1|Name=mRNA_P-fluviatile_contig10.928.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12288bp|location=Sequence derived from alignment at P-fluviatile_contig10:3743609..3755896- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:3743609..3755896- >mRNA_P-fluviatile_contig10.928.1 ID=mRNA_P-fluviatile_contig10.928.1|Name=mRNA_P-fluviatile_contig10.928.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2190bp|location=Sequence derived from alignment at P-fluviatile_contig10:3743609..3755896- (Porterinema fluviatile SAG_2381)back to top |