mRNA_P-fluviatile_contig10.907.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: D7FVS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS0_ECTSI) HSP 1 Score: 140 bits (353), Expect = 9.300e-39 Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAYGATTGFGKGSKQVTTEGEHGDQHLTWNVGQAWCDYNLEDLRVELQQF 543
R + ++ HV + F+R DCA GL FTRPE + LGS+ L+ LAE+C +DL S+ LKI LNAKKYP +V GSALKYDAY TTGF KGSKQ TEG+ GD HL+ G+AW Y+L+DLR++LQ F
Sbjct: 5 RDLVLRINSHVGALSRCFSRRPADCAVGLPRFTRPEKDVVVLELGSAAGCLLLLAEQCNVDLGLSVDLKIKLNAKKYPAVLVRGSALKYDAYKTTTGFAKGSKQDMTEGDDGDDHLSGCKGRAWRPYSLQDLRLQLQNF 143
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A6H5KIJ4_9PHAE (MazG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ4_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.810e-38 Identity = 84/186 (45.16%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 4 SVATGLALSGSMKPMSQQNSWESLSFEVARNLSAKAENADIRS-----ELFKLVG-HVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAYGATTGFGKGSKQVTTEGEHGDQHLTWNVGQAWCDYNLEDLRVELQQF 543
S + G+ S + P + W S SFE AR + + +A +R +L L+ HV + F+R DCA GL FTR E + +GS+ L+ LAERC +DL S+ LK+ LNAKKYP +V GSALKYDAY TTGF KGS+Q TEG+ GD HL+ G+AW ++L+DLRV+LQ F
Sbjct: 4 STSDGVGPSSGLAP--EGAGWGSFSFEEARQQARASSSAMLRHVLRPRDLVLLINSHVGALSRCFSRRPADCAVGLPHFTRTEKDVVVLEMGSAAACLLLLAERCNVDLGLSVDLKVKLNAKKYPAVLVRGSALKYDAYKTTTGFAKGSRQDMTEGDGGDDHLSGCNGRAWRPFSLQDLRVQLQNF 187
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: UPI001B7F05F9 (glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7F05F9) HSP 1 Score: 67.8 bits (164), Expect = 2.600e-11 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L LVG V + F E GL +T E+ L+ L + LV LAE+CRIDLPR++ K+ LN +KYP +V GSA KY Y
Sbjct: 38 RNLLLALVGEVGETAELFQWRGE-VKEGLPDWTAKEVEALSNELSDVLIYLVRLAEKCRIDLPRAVLRKVELNGQKYPADLVRGSAKKYTEY 128
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: UPI001CF45B6B (dCTP pyrophosphatase 1 isoform X1 n=3 Tax=Bufo TaxID=8383 RepID=UPI001CF45B6B) HSP 1 Score: 65.5 bits (158), Expect = 3.240e-10 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L LVG V ++ F E + GL +T + L L + L+ LAE+C +DLPR++ K+ LNAKKYPV V GSA KY Y
Sbjct: 49 RNLLLALVGEVGELAELFQWRGE-VSEGLPDWTPSQKESLRHELSDVLIYLLELAEKCHVDLPRAVLTKMELNAKKYPVDRVQGSAKKYTEY 139
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A8J6EC25_ELECQ (Uncharacterized protein (Fragment) n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EC25_ELECQ) HSP 1 Score: 63.2 bits (152), Expect = 1.210e-9 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L LVG V ++ F + E GL +T + + L + L+ LAE+C +DLPR++ K+ LNAKKYP+ V GSA KY Y
Sbjct: 20 RNLLLALVGEVGELAELFQWKGE-VLEGLPDWTPSQKESVQHELSDVLIYLLELAEKCHVDLPRAVLAKMELNAKKYPIERVQGSAKKYTEY 110
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A822FD25_9NEOB (dCTP pyrophosphatase 1 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822FD25_9NEOB) HSP 1 Score: 63.2 bits (152), Expect = 2.090e-9 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAYGATTGFGKGSKQ 438
R+ L LVG V ++ F + E GL ++ + L L + L+ LAE+C +DLPR++ K+ LNAKKYPV V GSA KY Y G +Q
Sbjct: 39 RNLLLALVGEVGELAELFQWKGE-VPEGLPDWSPSQKESLRHELSDVLIYLLELAEKCHVDLPRAVLDKMELNAKKYPVERVQGSAKKYTEYSVEPAMDGGDQQ 141
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A1E5WI02_9POAL (dCTP pyrophosphatase 1 n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5WI02_9POAL) HSP 1 Score: 63.5 bits (153), Expect = 2.700e-9 Identity = 45/146 (30.82%), Postives = 66/146 (45.21%), Query Frame = 1
Query: 22 ALSGSMKPMSQQNSWESLSFEVARNLSAKAENADIRSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAYGATTGFGKGSKQVTTEGEH 459
AL M +++ WE F RNL L LVG + ++ F + E +GL + E L E L + LV L++ C +DL ++ K+ +NA+KYPVG GS+ K+ Y +T G TT EH
Sbjct: 43 ALRKRMADFARERDWEQ--FHSPRNL------------LLALVGEMGELSEIFQWKGE-VPKGLPGWDEAEKEHLGEELSDVLLYLVRLSDMCGVDLGKAALRKMEINARKYPVGQCKGSSKKHTHYSSTNNIGANDNDNTTNKEH 173
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A7R8XGZ9_9CRUS (dCTP pyrophosphatase 1 n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XGZ9_9CRUS) HSP 1 Score: 62.0 bits (149), Expect = 6.930e-9 Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L LVG V ++ F E GL F+ + + E + + LV LA+RCRIDLP++I K+NLNA KYP V G + KY+ Y
Sbjct: 64 RNVLLALVGEVGELAELFQWRGE-VKEGLVDFSARDKERVGEEMSDILIYLVMLADRCRIDLPKAITEKMNLNALKYPRDKVKGDSRKYNEY 154
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A3M7S2Y5_BRAPC (dCTP pyrophosphatase 1 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7S2Y5_BRAPC) HSP 1 Score: 61.2 bits (147), Expect = 1.220e-8 Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L LVG V ++ F + E + FT E L + + F+ L+ LA+ C++DLP++++ KI LN KKYP+ G + KY+ Y
Sbjct: 59 RNLLLALVGEVGELSEIFQWKGEVPVGLGRTFTDNEKEHLEQEISDVFIYLIRLAQACKVDLPKAVESKIELNKKKYPIDKCFGKSNKYNEY 150
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Match: A0A1W0XCN9_HYPDU (Putative dCTP pyrophosphatase 1 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0XCN9_HYPDU) HSP 1 Score: 62.8 bits (151), Expect = 2.680e-8 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 127 RSELFKLVGHVAKVCGAFAREQEDCARGLKAFTRPELGELAENLGSSFMTLVHLAERCRIDLPRSIQLKINLNAKKYPVGVVMGSALKYDAY 402
R+ L +VG V +V F + + D A G F R E L + L + L+ LA+ C+++LP++++ K+ LNA +YPV V GS KY Y
Sbjct: 293 RNLLMAMVGEVGEVAEIF-QWKGDVAEGCPEFDRKERTALEQELSDVMIYLIRLADVCKVNLPKAVEKKMQLNAARYPVDKVFGSCKKYTEY 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.907.1 >prot_P-fluviatile_contig10.907.1 ID=prot_P-fluviatile_contig10.907.1|Name=mRNA_P-fluviatile_contig10.907.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=184bp VSVATGLALSGSMKPMSQQNSWESLSFEVARNLSAKAENADIRSELFKLVback to top mRNA from alignment at P-fluviatile_contig10:3487679..3493414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.907.1 ID=mRNA_P-fluviatile_contig10.907.1|Name=mRNA_P-fluviatile_contig10.907.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5736bp|location=Sequence derived from alignment at P-fluviatile_contig10:3487679..3493414- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:3487679..3493414- >mRNA_P-fluviatile_contig10.907.1 ID=mRNA_P-fluviatile_contig10.907.1|Name=mRNA_P-fluviatile_contig10.907.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1104bp|location=Sequence derived from alignment at P-fluviatile_contig10:3487679..3493414- (Porterinema fluviatile SAG_2381)back to top |