mRNA_P-fluviatile_contig10.901.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig10.901.1
Unique NamemRNA_P-fluviatile_contig10.901.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 4.150e-69
Identity = 123/135 (91.11%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGKAKSSAS--QDY 399
            MSGKGKGGRG +KS SKSSKAGLQFPVARIGR+LK+GK+ATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK  +VGKAK+SAS  QDY
Sbjct:   52 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 6.290e-69
Identity = 122/136 (89.71%), Postives = 128/136 (94.12%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVG---KAKSSASQDY 399
            MSGKGKGGRG +KS SKSSKAGLQFPVARIGR+LK+GK+ATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK  +VG   KA +SASQDY
Sbjct:    1 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.550e-62
Identity = 114/136 (83.82%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:    1 MSGKGKGGRGDR--KSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGK-AKSSASQDY 399
            MSGKGK GRG    K  SKSSKAGLQFPVAR+GR+LKKGKFATRVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI PRHIQLAVRNDEELNKLLG VTI+SGGVLPNIHAVLLPK     K AK SASQDY
Sbjct:    1 MSGKGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKGSASQDY 136
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 9.030e-62
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGK 372
            MSGKGKGGRG +KS ++S+KAGLQFPV R+GRFLKKGK+A+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK K V K
Sbjct:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK-KTVKK 122
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.470e-61
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSA--SKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGKAKSSASQDY 399
            M+GKGK GRG  K    S+SSKAGLQFPV RI RFLKKG++A RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPK+K     K SASQDY
Sbjct:    1 MAGKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 7.430e-61
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 354
            MSGKGKGGRG +KS ++S+KAGLQFPV R+GRFLKKGK+A+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK
Sbjct:   46 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 162
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.550e-60
Identity = 105/136 (77.21%), Postives = 122/136 (89.71%), Query Frame = 1 
Query:    7 GKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK-----NKNVGKAKSSASQDY 399
            GKGKGGRGD+K+ SKS+KAGLQFPV R+GRFLK+G++A RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPK     +K    + +SASQ+Y
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.330e-59
Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGKAKSSAS--QDY 399
            MSGKGKGGRG +KS + S+KAGLQFPV RIGR+LK+GKFATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI PRHI LAV+NDEELNKLLG VTIA GGVLPNIH+VLLPK  + GK  SSAS  QDY
Sbjct:    1 MSGKGKGGRG-KKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKKASGGKTLSSASKSQDY 134
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.110e-58
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1 
Query:    1 MSGKGKGGRGD--RKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGKAKS 381
            M+GKGKGGRG   +KS SKSSKAGLQFPVAR+GRFLK G++A RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPK K    AK+
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPK-KTASAAKA 128
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BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Match: A0A7S3K2Q9_9STRA (Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.090e-58
Identity = 106/138 (76.81%), Postives = 116/138 (84.06%), Query Frame = 1 
Query:    1 MSGKGKGGRGDRKSA-----SKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKNKNVGKAKSSASQDY 399
            MSGKGKGGR           +KS+KAGLQFPV RIGRFLK+GK+ATRVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPK       K+S SQ++
Sbjct:    1 MSGKGKGGRXXXXXXXXXXXTKSAKAGLQFPVGRIGRFLKQGKYATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGSVTIASGGVLPNIHAVLLPKKSKSKTTKASGSQEF 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVQ5_ECTSI4.150e-6991.11Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE6.290e-6989.71Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2CIK1_9STRA2.550e-6283.82Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
D7FWI9_ECTSI9.030e-6289.52Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
W7TMB5_9STRA5.470e-6180.00Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
D7G193_ECTSI7.430e-6191.53Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835ZLE9_9STRA2.550e-6077.21Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2GRL8_9STRA2.330e-5980.00Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
A0A836CG77_9STRA1.110e-5882.95Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S3K2Q9_9STRA2.090e-5876.81Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:3397893..3399859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue2e-57
Seed eggNOG ortholog2880.D7FVQ5
Preferred nameH2AFY
KEGG koko:K11251,ko:K16617
KEGG Pathwayko04217,ko04974,ko05034,ko05322,map04217,map04974,map05034,map05322
GOsGO:0000122,GO:0000182,GO:0000228,GO:0000775,GO:0000785,GO:0000786,GO:0000790,GO:0000792,GO:0000793,GO:0000803,GO:0000805,GO:0000976,GO:0000977,GO:0000979,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001739,GO:0001740,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005730,GO:0005813,GO:0005815,GO:0005856,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006342,GO:0006355,GO:0006356,GO:0006357,GO:0006469,GO:0006996,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007549,GO:0008104,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010385,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015630,GO:0016043,GO:0016458,GO:0016479,GO:0019207,GO:0019210,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0030234,GO:0030291,GO:0030856,GO:0030858,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033127,GO:0033128,GO:0033365,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034502,GO:0034613,GO:0034622,GO:0034728,GO:0040029,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045682,GO:0045684,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045840,GO:0045859,GO:0045876,GO:0045892,GO:0045931,GO:0045934,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051348,GO:0051569,GO:0051572,GO:0051641,GO:0051726,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060322,GO:0060341,GO:0061085,GO:0061086,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070199,GO:0070727,GO:0071103,GO:0071168,GO:0071169,GO:0071824,GO:0071840,GO:0071900,GO:0071901,GO:0072594,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098687,GO:0098772,GO:1901363,GO:1901836,GO:1901837,GO:1901987,GO:1901988,GO:1902275,GO:1902679,GO:1902749,GO:1902750,GO:1902882,GO:1902883,GO:1902884,GO:1903506,GO:1903507,GO:1903827,GO:1903828,GO:1904814,GO:1904815,GO:1905268,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.Histone H2A
EggNOG OGsCOG5262@1,KOG1756@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone H2A.X
Ec32 orthologEc-03_003330.1
Exons3
Model size1305
Cds size402
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.901.1prot_P-fluviatile_contig10.901.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig10 3397893..3398956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815410.8494837-CDS-P-fluviatile_contig10:3397892..33979421622815410.8494837-CDS-P-fluviatile_contig10:3397892..3397942Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3397893..3397942 +
1693561779.2545836-CDS-P-fluviatile_contig10:3397892..33979421693561779.2545836-CDS-P-fluviatile_contig10:3397892..3397942Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3397893..3397942 +
1622815410.859591-CDS-P-fluviatile_contig10:3398191..33983531622815410.859591-CDS-P-fluviatile_contig10:3398191..3398353Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3398192..3398353 +
1693561779.2722113-CDS-P-fluviatile_contig10:3398191..33983531693561779.2722113-CDS-P-fluviatile_contig10:3398191..3398353Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3398192..3398353 +
1622815410.8688219-CDS-P-fluviatile_contig10:3398766..33989561622815410.8688219-CDS-P-fluviatile_contig10:3398766..3398956Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3398767..3398956 +
1693561779.2813554-CDS-P-fluviatile_contig10:3398766..33989561693561779.2813554-CDS-P-fluviatile_contig10:3398766..3398956Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 3398767..3398956 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815410.8793519-UTR-P-fluviatile_contig10:3398956..33998591622815410.8793519-UTR-P-fluviatile_contig10:3398956..3399859Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 3398957..3399859 +
1693561779.2884183-UTR-P-fluviatile_contig10:3398956..33998591693561779.2884183-UTR-P-fluviatile_contig10:3398956..3399859Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 3398957..3399859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig10.901.1

>prot_P-fluviatile_contig10.901.1 ID=prot_P-fluviatile_contig10.901.1|Name=mRNA_P-fluviatile_contig10.901.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=134bp
MSGKGKGGRGDRKSASKSSKAGLQFPVARIGRFLKKGKFATRVGAGAPVY
LAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEV
TIASGGVLPNIHAVLLPKNKNVGKAKSSASQDY*
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mRNA from alignment at P-fluviatile_contig10:3397893..3399859+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig10.901.1 ID=mRNA_P-fluviatile_contig10.901.1|Name=mRNA_P-fluviatile_contig10.901.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1967bp|location=Sequence derived from alignment at P-fluviatile_contig10:3397893..3399859+ (Porterinema fluviatile SAG_2381)
ATGAGCGGCAAGGGAAAGGGTGGCCGTGGTGACAGGAAGAGCGCCTCAAA
GTGAGTTCACGAATGCGTTCCGCAACGTTTAGCCCTACTTTGGTTTGCAG
AGACCGAATCGGACCAGCGCCCGGCGCATAAATCGTAATCTGCGCACGAC
GTCTGCTGAAAAACTCCAGCCCCAATCCTCCCGTTGTTGTTTTCCTTTGA
CAAAATGCGGTCGACTAAATGCTTCGCCGTCTGTGAAAAACAACTTGGCT
TCTCACCATGCAATCTGTGTTTTTGCCCTTGACGCACCTTTAACGACAGG
TCCTCCAAGGCCGGGCTGCAGTTCCCCGTGGCGCGTATCGGTCGTTTCCT
GAAGAAGGGCAAGTTCGCCACCCGCGTTGGGGCCGGCGCCCCTGTCTACC
TCGCTGCCGTCCTGGAGTACCTGACGGCTGAGGTGCTCGAGCTCGCCGGC
AACGCAGCAAGGTGCAACACTTGCCAACATCAGCGACTCTCCGTGCTCGA
TACGTTACCCCTACCACACTTTTTAATGCAAACTCTGCCTCTCAAGTTTT
GATCAAGCAAGGATGCCGTAAGGTAGCTTGTGAGCATGCGGGCTCCGAAG
GGCATGGCGAACACATCTGACGTTACAGCACGGTCCCTCACCTTAGAACT
TCCTATTTTTGGCGAGGCTCCGGTTCTTCCCTCCGTAGGCTGCCGATAGC
CAGTGTTTGGGTTTTTGTGCAGGGTTTCACAAGCAGGCATCACAAACGAG
CGATAGTTCTTATATTTTCGAAAAATTGAGGTTCTTGTTCTTATGAGGTG
TGTTCTTGAGTTCGAATCCGTCCTTTGCTGCTCAGCTCGCGCCCTTTTCT
CGACACTCGTTGTTGCTCTCACAGGGACAACAAGAAAGCCCGCATCATCC
CCCGCCACATCCAGCTGGCCGTCCGCAACGACGAGGAGCTGAACAAGCTT
CTCGGCGAAGTGACCATCGCATCTGGCGGAGTTTTGCCCAACATCCACGC
CGTGTTGCTGCCGAAGAACAAGAACGTCGGCAAGGCCAAGTCTTCCGCCT
CCCAGGACTACTAATAAGGCTGCCGCTGCGCTCGCGATGAGCGCCTGACG
TGGAATGATTACTTCCGAAACCAATTTTATAAAAATGCAAAACCCTGGTG
TTTACTCAACACCACCCATCTGAGTGAAGCAACATATCCCCTTAAAGAAA
TCTGGACTACTTCGCATGTGCAAGCTTTTGAGTTTTAGGTTTCACGTCGA
ACGGCTTTGCCGTAGGCCATGCTCTGCGACGATGTCAAAAGATTGGCCGA
GAGCTTAAAATACGTCTCGCCATGCGTTTCTTTCTGCTGTGTGAAGAATA
GTCCTGCAGATGTGTTTAGTATTGACACAAAGGAGCGGGATTGTTTTGCG
GCCAAGAAAGGCGGCAGACCTTTTTTTGCCCACGTGAATGAGTTCAACTT
GATCCGTTCTTAGTCTCGCCGAACATTACCGGGGGATTTCACCTAAGACC
AAATTATTTGAAGGGGGTTGAATCAGTACAGGCGGATACGCAGACTTCTG
CCGACTCATGTTACCGCGTTCGAGTAGGCCGCAGACCTTGTGTTGTCTGG
TACGAGACGTAGTTGCCGAGGCGGGCGGAGGAAAATCAAAGGGTGACTCA
GTGAAGTGTATGATATGGAGTGTGTAAATGTCCACGCCCGCTAGATGGCG
CTGCCGCTCAGTATTCTGCCGCACGTGGAGGTATCATGTGACGATCTTTC
GGCGGTGATTGTTGGCGCGTTGGTGATTATGTTCACGCGTGGTGGATTCG
ATAAACTTGTTCTCAAGCATATCTTGGCCGAAATCCCACTCTGCTTGCGC
TTTGGACATGTGGGCAGCGGGCATGGCCATGGTCATGAACGCGTGACAAC
TCCGTGGAGAGCAACGAGAGGATGAAACGCAGACGCCATTTTTTTTAGCA
GGCTTAACGAAGCGTCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig10:3397893..3399859+

>mRNA_P-fluviatile_contig10.901.1 ID=mRNA_P-fluviatile_contig10.901.1|Name=mRNA_P-fluviatile_contig10.901.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=804bp|location=Sequence derived from alignment at P-fluviatile_contig10:3397893..3399859+ (Porterinema fluviatile SAG_2381)
ATGAGCGGCAAGGGAAAGGGTGGCCGTGGTGACAGGAAGAGCGCCTCAAA
ATGAGCGGCAAGGGAAAGGGTGGCCGTGGTGACAGGAAGAGCGCCTCAAA
GTCCTCCAAGGCCGGGCTGCAGTTCCCCGTGGCGCGTATCGGTCGTTTCC
TGAAGAAGGGCAAGTTCGCCACCCGCGTTGGGGCCGGCGCCCCTGTCTAC
CTCGCTGCCGTCCTGGAGTACCTGACGGCTGAGGTGCTCGAGCTCGCCGG
CAACGCAGCAAGGTCCTCCAAGGCCGGGCTGCAGTTCCCCGTGGCGCGTA
TCGGTCGTTTCCTGAAGAAGGGCAAGTTCGCCACCCGCGTTGGGGCCGGC
GCCCCTGTCTACCTCGCTGCCGTCCTGGAGTACCTGACGGCTGAGGTGCT
CGAGCTCGCCGGCAACGCAGCAAGGGACAACAAGAAAGCCCGCATCATCC
CCCGCCACATCCAGCTGGCCGTCCGCAACGACGAGGAGCTGAACAAGCTT
CTCGGCGAAGTGACCATCGCATCTGGCGGAGTTTTGCCCAACATCCACGC
CGTGTTGCTGCCGAAGAACAAGAACGTCGGCAAGGCCAAGTCTTCCGCCT
CCCAGGACTACTAAGGACAACAAGAAAGCCCGCATCATCCCCCGCCACAT
CCAGCTGGCCGTCCGCAACGACGAGGAGCTGAACAAGCTTCTCGGCGAAG
TGACCATCGCATCTGGCGGAGTTTTGCCCAACATCCACGCCGTGTTGCTG
CCGAAGAACAAGAACGTCGGCAAGGCCAAGTCTTCCGCCTCCCAGGACTA
CTAA
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