mRNA_P-fluviatile_contig10.874.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: D7FIH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH7_ECTSI) HSP 1 Score: 233 bits (595), Expect = 3.150e-71 Identity = 125/179 (69.83%), Postives = 141/179 (78.77%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVH------EFGAGGAQGPM-AMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSG----SVYSKACLVVDEMLSGGILESLDPDAILSAVKLQK 504
M+SVL+CN DGK+LLSRYFE Q H E +GG ++RDTA R S+ +EVLG+TRHLWTKGT+ CPQVARAKGGLIIVFGAVE LLLFLCGS E DELTLAD L TLAK IVALCRQG K+QR TE AFLS S+YSKACLV+DEM+ GGILESLD DAILS++KLQK
Sbjct: 1 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQK 179
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: A0A835YRG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG5_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.670e-26 Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGS-KNQRVTEAAFLSGSVYSKACLVVDEMLSGGILESLDPDAILSAVKLQ 501
MHS+L+ N+ G +L+ RYF+ +V E GA G +A D + + EV +TR +W + + QVAR +II++ + LL+F CG + DELTL+D + L I LC S K R TE+ + G Y+K L VDEM+ GGILE+LDPDA+LS K++
Sbjct: 3 MHSLLILNERGHLLMGRYFD-EVLECGALQHLGDVAS-DREQCMQWWEDEVRQQTREMW-QFAHTANQVARGADDVIIIYRRIGDLLVFACGRDDCDELTLSDVVDCLGGVIATLCEDSSAKGARPTESWLMIGDTYAKVALAVDEMMPGGILEALDPDAVLSMTKMR 167
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: K3X9H2_GLOUD (Coatomer subunit zeta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9H2_GLOUD) HSP 1 Score: 78.2 bits (191), Expect = 1.780e-13 Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSGSVYSKACLVVDEMLSGGILESLDPDAILSAVKLQKAP 510
+HS + CN+DG +LL+RYF+ + P+ D +S A+V + HLW K G +V V L +FL G++EYDEL L+D + L +V +++TEA+F + Y+K + +DEM+ G LE++D +I KL+ P
Sbjct: 2 LHSCICCNEDGYVLLARYFQAAL----------PL---DERKRYESHLAQVCAQIPHLWEKIKKDAQDQFVVCDGQFVVLRQVGELRVFLAGNSEYDELILSDIMGVLHSVLVT-----QLEKKLTEASFFAN--YAKVVVALDEMVQQGHLENMDEASIEQMSKLRPYP 151
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: A0A5D6XXQ1_9STRA (Coatomer subunit zeta (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXQ1_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.200e-8 Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSGSVYSKACLVVDEM 438
+HS+L CNDDG +LL+RYF+P P+ +T A ++ A + LW T+ V A+ ++V L L GS EYDEL LAD + + ++ +++TE + L+ Y+K + +DEM
Sbjct: 2 LHSLLCCNDDGFVLLARYFQPAT----------PL---ETRAAYEAQLARACAQVPQLWDATTSGDQLVVCAEQ--LVVLRRTGELRWLLAGSGEYDELLLADVMSVWSAAVTL-----QLEKKLTETSLLTN--YAKVVVALDEM 125
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: A0A7S1X8E3_9CHLO (Coatomer subunit zeta n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X8E3_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 4.760e-7 Identity = 40/167 (23.95%), Postives = 74/167 (44.31%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSGSVYSKACLVVDEMLSGGILESLDPDAILSAVKLQ 501
+H VL+ + G+++L R+F+ +E +S L E + +VF + +++L GS EYDEL L+ + + +++ ++ + E Y+K CLV+DE+L+ G L+S +P+AI A+KL+
Sbjct: 57 VHCVLIASRAGEVILERFFDQLSNE------------------ERSETRAALHEVSAPMISSAVDDAEFVSCYRETTVVFSIMADCVIYLLGSGEYDELMLSSIIRIIKEALKFALKRPPSETAIHER-------YTKVCLVIDEILNEGTLDSTNPEAIKKALKLK 198
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: F0ZIR6_DICPU (Clat_adaptor_s domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZIR6_DICPU) HSP 1 Score: 59.3 bits (142), Expect = 6.810e-7 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 223 GLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSGSVYSKACLVVDEMLSGGILESLDPDAI 480
G I VF V L+LFLCGS EYDEL L+D L+ + +S+ +C K + VTEA F+ K L +DE++ G L+ + ++I
Sbjct: 58 GYITVFTGVGDLMLFLCGSDEYDELALSDILIPIVESLKDIC----KKKGVTEAYFIEQ--IPKFILYLDEIIQRGHLDQVQLESI 137
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Match: A0A151ZAK2_9MYCE (Clat_adaptor_s domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAK2_9MYCE) HSP 1 Score: 53.5 bits (127), Expect = 6.820e-5 Identity = 44/162 (27.16%), Postives = 76/162 (46.91%), Query Frame = 1
Query: 1 MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEVLGETRHLWTKGTASCPQVARAKGGLIIVFGAVEGLLLFLCGSAEYDELTLADTLVTLAKSIVALCRQGSKNQRVTEAAFLSGSVYSKACLVVDEMLSGGILESLDPDAILS 486
++++L+ N +G I+ S+Y+ E + + + Q T+ W+ V G I VF V L++FLCGS EYDEL L++ + L ++I +C K + VTEA F+ K L +DE++ G ++ ++IL+
Sbjct: 2 INNLLITNLNGNIVFSKYYNILTEE------------KQIEFEKLTYQF-----TKDEWSFAKGEKHLVTEFSGNKI-VFTNVGDLMIFLCGSNEYDELALSEIIFPLMETIKEVC----KKKGVTEAHFIEQ--IPKFVLYLDEIIQKGQIDQTQIESILN 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.874.1 >prot_P-fluviatile_contig10.874.1 ID=prot_P-fluviatile_contig10.874.1|Name=mRNA_P-fluviatile_contig10.874.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=171bp MHSVLVCNDDGKILLSRYFEPQVHEFGAGGAQGPMAMRDTAIARKSSQAEback to top mRNA from alignment at P-fluviatile_contig10:3170536..3174013- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.874.1 ID=mRNA_P-fluviatile_contig10.874.1|Name=mRNA_P-fluviatile_contig10.874.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3478bp|location=Sequence derived from alignment at P-fluviatile_contig10:3170536..3174013- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:3170536..3174013- >mRNA_P-fluviatile_contig10.874.1 ID=mRNA_P-fluviatile_contig10.874.1|Name=mRNA_P-fluviatile_contig10.874.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1026bp|location=Sequence derived from alignment at P-fluviatile_contig10:3170536..3174013- (Porterinema fluviatile SAG_2381)back to top |