mRNA_P-fluviatile_contig10.860.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.600e-17 Identity = 68/184 (36.96%), Postives = 93/184 (50.54%), Query Frame = 2
Query: 2 LGWVRTTPGGSRVVHDFEDFVHVDER*RKGRSSSCTTMRNPLFA--------RSRARGLSQTKVVLLAAVVRPHHTLATNA-LSTATSACGPSQRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
L W G +VHD D+VHVDE+ T ++ L+ RS TKV+ L+AV RP TN +Q AQR+SRNR +GT+VT V VT++ + LIDNVIPAIK KW RI+ QQD+A+P + D+ + AC SDG+ +++ PP
Sbjct: 69 LKWAFERLGPDLMVHDMMDYVHVDEK-----WFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVT-VPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILL-QQDNARPHVPLSDERVAAACASDGWAIEVVCQPP 245
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC) HSP 1 Score: 82.0 bits (201), Expect = 1.940e-15 Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 2
Query: 161 TKVVLLAAVVRPHHTLATNALSTATSACGP-SQRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
TKV+ LA V RP + A N + P + + AQRNS+NRT GT+ T + VTK++ + LI+ V+PAI+ KW + IF QQD+A+P DQ+ LE DGFD +L PP
Sbjct: 28 TKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWPRSSNMEPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPP 150
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: UPI000E6FD0CA (uncharacterized protein LOC113359240 n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FD0CA) HSP 1 Score: 80.5 bits (197), Expect = 1.520e-14 Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 2
Query: 161 TKVVLLAAVVRPHHTLATNA-LSTATSACGPSQRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
TKV+ LA V RP + A N S + + AQRNS+NRT GT+ T + VTK++ LI+ V PAI+ KW + IF QQD+AKP DQ+ LE DGFD +L PP
Sbjct: 144 TKVMFLAVVARPRYDSANNEEFSGKIGIFSFTFQEPAQRNSKNRTAGTMETKAILSVTKDVICLCLINKVFPAIRSKWPRSSNMEPIFIQQDNAKPHINPNDQEFLEDASKDGFDIRLSFQPP 266
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0) HSP 1 Score: 78.6 bits (192), Expect = 6.290e-14 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 2
Query: 161 TKVVLLAAVVRPHHTLATNALSTATSACGP-SQRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
TKV+ LA V RP + A N + P + + AQRNS+NRT GT+ T + VTK++ + LI+ V PA++ KW + IF QQD+A+P DQ+ LE DGFD +L PP
Sbjct: 41 TKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKEILSVTKDVIRSCLINKVFPAMRSKWPRSSNMDPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPP 163
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR) HSP 1 Score: 78.6 bits (192), Expect = 1.610e-13 Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 2
Query: 47 DFEDFVHVDER*RKGRSSSCTTMRNPLFARSRARGLSQT---KVVLLAAVVRPHHTLATNALSTATSACGPSQ-RRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKL 511
+ D +H+DE+ +S +PL S+ K++ LAAV RP + + N P + A+RNS+NRT GTL T + +TK++ + LI+ ++PAI++KW + ++IF QQD+AKP I D + +EA DGFD +L
Sbjct: 250 NMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKWPCSSS-KMIFIQQDNAKPHLGINDDEFVEAAKIDGFDIRL 407
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: A0A484N2F7_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N2F7_9ASTE) HSP 1 Score: 75.1 bits (183), Expect = 1.700e-13 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 2
Query: 266 AQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
AQRNSRNR GTLVT V K+++ + LI+ VI AIK+KW G+ R+I QQD+AKP A D L+ +DGFD L PP
Sbjct: 32 AQRNSRNRPRGTLVTKPVPIVNKDVYRSFLINKVILAIKEKWPTGSNKRVII-QQDNAKPHIACNDPAFLQVAQADGFDISLTFQPP 117
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.860e-13 Identity = 64/182 (35.16%), Postives = 91/182 (50.00%), Query Frame = 2
Query: 2 LGWVRTTPGGSRVVHDFEDFVHVDER*----RKGRSSSCTTMRNPLFARSRARGLSQTKVVLLAAVVRPHHTLATNALSTATSACGP---SQRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
L W + G V D +VH+DE+ R R+ P ++++ TKV+ L+AV RP N G ++ AQRNSRNR +GTLVT V V V+++ + L++NVIPAIK KW R I QQD+A+P D+ +L AC +DG+D + PP
Sbjct: 144 LKWAQKFVGPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFI-TKVMFLSAVARPRWNY--NKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVT-VPVNVSRDTYRDMLVNNVIPAIKNKW-PDARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPP 320
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: A0A484LB41_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LB41_9ASTE) HSP 1 Score: 74.3 bits (181), Expect = 1.100e-12 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 2
Query: 266 AQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
AQRNSRNR GTLVT V K+++ + LI+ VIPAIK+KW + R+I QQD++KP A D L+ +DGFD L PP
Sbjct: 34 AQRNSRNRPRGTLVTKPVPIVNKDVYRSFLINKVIPAIKEKWPTDSNKRVII-QQDNSKPHIACNDPLFLQVAQADGFDISLTFQPP 119
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.220e-12 Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 2
Query: 254 QRRSAQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
+R A+R+SRNR GTLVT V VT++I+ LIDNVIPAIK KW + R I QQD+A+P D ++EAC+SD +D ++ PP
Sbjct: 181 ERVPAERSSRNRAAGTLVTKP-VSVTQDIYRKMLIDNVIPAIKAKWPRNSS-RCITIQQDNARPHVPPLDARIVEACHSDRWDMSVVYQPP 269
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Match: A0A024U573_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U573_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 6.750e-12 Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 2
Query: 266 AQRNSRNRTTGTLVTMV*VEVTKEIHMAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDGFDTKLINPPP 526
A+R+SRNR GTLVT V VT+ ++ L+ +VIPAIK KW G R+ F QQD AKP A D D++EAC S G+ +L PP
Sbjct: 133 AERSSRNRPAGTLVTTP-VAVTRPVYKDMLVKHVIPAIKTKWPKGASRRV-FLQQDFAKPHVAPTDDDIIEACSSGGWAMELKFQPP 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.860.1 >prot_P-fluviatile_contig10.860.1 ID=prot_P-fluviatile_contig10.860.1|Name=mRNA_P-fluviatile_contig10.860.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=86bp MAKLIDNVIPAIKKKWRAGTRHRIIFTQQDSAKPCRAIEDQDLLEACYSDback to top mRNA from alignment at P-fluviatile_contig10:3045507..3046107+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.860.1 ID=mRNA_P-fluviatile_contig10.860.1|Name=mRNA_P-fluviatile_contig10.860.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=601bp|location=Sequence derived from alignment at P-fluviatile_contig10:3045507..3046107+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:3045507..3046107+ >mRNA_P-fluviatile_contig10.860.1 ID=mRNA_P-fluviatile_contig10.860.1|Name=mRNA_P-fluviatile_contig10.860.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=516bp|location=Sequence derived from alignment at P-fluviatile_contig10:3045507..3046107+ (Porterinema fluviatile SAG_2381)back to top |