mRNA_P-fluviatile_contig10.853.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 4.290e-133 Identity = 220/325 (67.69%), Postives = 250/325 (76.92%), Query Frame = 3
Query: 96 GVHVPMVMLLVCRLQWSEGFVAVAPAGRR-TSSFTRGSMNDMFGYSADDRRGAWGSSRQAGLVRRRSPASPSPGFPLQAAEEGGGTEGGTEDDTL----GFYSEIAARLGKNAGDGKPGETSTVERDGSGPVDKDEDGGSQVDKAIYDELRARRDFGFEQDLGLELEKRNITKEAEAAKIIDAGLEKMPGITSSTTYTPNADLTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMHGVEMSGVARYLAENRNRAFMHWDAIAYPRPLTLSGGPKQNKAFQLVKLKDTMTGAWHSVSVYLTLDVRTSCWLIESCIVKGEL 1055
G+HV ++LL C +QWS GF+AV+P RR S T S ND+ +R + GS R L+RRRS PGF L+A E GGG E EDDTL GFYSEIAARLGK A G+P ++ KDED GS DELRARRDFGFEQDLGLELEKRNITKEAEA KIIDAGLE+MPG+TSS T+ P+++LTPREVVTSVLEALKNND PYHNHGVEVF+RFL+PSSAMHGVEMSGVARYLAENRNRAFMHW+ +A+PRPLT+SGG KQNKAFQ VKL+DTMTGAWHSVSVYLTLD R++CWLIESCIVKGE+
Sbjct: 11 GLHV--LLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDLH------KRESRGSGRHGSLIRRRSGG---PGFSLKANEAGGGAE--EEDDTLELTKGFYSEIAARLGKTA-QGQPQDSQETA--------KDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.970e-12 Identity = 65/217 (29.95%), Postives = 109/217 (50.23%), Query Frame = 3
Query: 480 KDEDGGSQVD-KAIYDELRARRDFGFEQDLGL----ELEKRNITKEAEAAK-IIDAGLEKM-------------PGITSSTTYTPNADLTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMHGVEMSGVARY---LAENRNRAFMHWDAIAYPRPLTLSGGPKQNKAFQLVKLKDTMTGAWHSVSVYLTLDVRTS----CWLIESCIVKGE 1052
K+ +GG + K IY+ LR R FG E++ +E +N+T + +A++ ++ A L M P I T+ P+ LTP VV S+L+A++ ND PY NHG+EV RF S +S+ + +Y + ++ + WDAI + +PL +G KA Q ++L+ + W V+V L RT+ WL++S ++ +
Sbjct: 64 KEREGGQLTEEKDIYNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTS--PDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLIARK 271
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU) HSP 1 Score: 68.6 bits (166), Expect = 3.710e-10 Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 3
Query: 663 TTYTPNADLTPREVVTSVLEAL--KNNDHPYHNHGVEVFMRFLSPSSA--MHGVEMSGVARYLAENRNRAFMHWDAIAYPRPLT-LSGGPKQNKAFQLVKLKDTMTGAWHSVSVYLTL 1001
T P+A L+PREV+TSV+E+L N D P +G EV MRFL+P+ A + + +G +RYL + F+ W+ + + L+G +AFQ++ L+ + T W S +L L
Sbjct: 25 TNLKPSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLRSSPTAEWCSARFHLVL 142
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.350e-5 Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = 3
Query: 675 PNADLTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMHGVEMSGVARYLAENRNRAFMHWDAIAYPRPLTLSGGPKQNK--AFQLVKLKDTMTGAWHSVSVYLTLDVRTSCWLIESCIVK 1046
P+A+LT EVVT VLEAL+NND+P N GVE+ + S +S + +E + E + + + L Q+K AF V+L D M SV+ L+ CWLI+S +V+
Sbjct: 244 PDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYSQDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Match: A0A7S4ALD3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALD3_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.730e-5 Identity = 46/136 (33.82%), Postives = 64/136 (47.06%), Query Frame = 3
Query: 666 TYTPNADLTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAM---HGVEMSGVARYLAENRNRA-FMHWDAIAYPRPLTLSGGPKQNKAFQLVKLKDTMTGAWHSVSVYLTL-----DVRTSCWLIESCIVK 1046
T P+ADLT EVV VL ALKNND+PY N GVE+ + SP S + G+ + +L E +A F H +A + G K F +L+ T +SV L D WLI+S +++
Sbjct: 190 TTVPDADLTAGEVVLLVLTALKNNDNPYVNKGVEILFGYSSPGSQIKQEEGLTPAEYGEFLKETEYKALFEHLEATIEKGEYSFEG----KKGFFTARLQ-TGPAPSDCISVNFILSGSSPDDDDGAWLIDSILIR 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.853.1 >prot_P-fluviatile_contig10.853.1 ID=prot_P-fluviatile_contig10.853.1|Name=mRNA_P-fluviatile_contig10.853.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=325bp MFMPGVHVPMVMLLVCRLQWSEGFVAVAPAGRRTSSFTRGSMNDMFGYSAback to top mRNA from alignment at P-fluviatile_contig10:2989883..2995066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.853.1 ID=mRNA_P-fluviatile_contig10.853.1|Name=mRNA_P-fluviatile_contig10.853.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5184bp|location=Sequence derived from alignment at P-fluviatile_contig10:2989883..2995066+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:2989883..2995066+ >mRNA_P-fluviatile_contig10.853.1 ID=mRNA_P-fluviatile_contig10.853.1|Name=mRNA_P-fluviatile_contig10.853.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1950bp|location=Sequence derived from alignment at P-fluviatile_contig10:2989883..2995066+ (Porterinema fluviatile SAG_2381)back to top |