mRNA_P-fluviatile_contig10.756.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.756.1 vs. uniprot
Match: D8LTU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU4_ECTSI) HSP 1 Score: 857 bits (2213), Expect = 6.770e-286 Identity = 601/1398 (42.99%), Postives = 731/1398 (52.29%), Query Frame = 1
Query: 1 PPPFRQTTTAVAPNESGDSPSAMPSPRLGQRQRRRASWSSVRDFRLARGFARDEETTSDDEGCSPKH-KVPPRLQLQWEMQGVSGRAYQKDGNLSLYHKKKMAARRRLFKHEGVRAAIERGWWPYLPLRWVVLNVKEVVKILPRQGYVRLFTTMYATLVPTAGEAEAVETANWEYMEDAKGLPSELSKAGIPLGAFSDAMFAVADNASWTETVLANDYIKFLDLLWKRVRPDILF-PRPKQPDGDKP---------------------------------------------SNFSTTMLKAGPKKRQGA-------------------RPPPPLTKPPRSPEGLLVLDIPGFSPREAQRAMWAWKGGYVDPEVERTLRLARGSV----GSSGDAGVXXXXXXXXXXXXXXXXXXXXGATRRGDLTPRQQQGQGRGWKQKEAKQLGCNTRGRQQLLAAGMLDDWEGLSERAGAGXXXXXXXXXXXXXXXXXXXTLRDFMARYFALDPREGFAFSLFLERMQPGLFDGGSEEGGNKIGGKYGGGRGR---------------------------------------VRSYRSEDEVTQMALRRKFPTSVLEGLLAAWRSGKKGMTPAEYRTAYVEPSQRANFVAYAIANGWGTKAGGLHSRETLGGVAEEWRLGGGRCPEVEVVWEILDDLXXXXXXXXXXXXFSDGVDLHTIPHRLLYDVAPQAQAQAQCRSNPR--------LRXXXXXXXXXIDRRHVRASTAPASSTTATRVVAAAVAATSGKRDGGT--------GGMGPAGRILLRGEKVAGSVRQGQIAHYQTLCPTERGECLEITLVSEGEPAERGRGGSGRRPSSSCPPAAISLYAIQAPQRPLRLSPYPWASRGKTHHRLLLNWKGSSSF---SSFSCSPPSPLSLRPLSSLCSPWRGDRGYAAPNPVGA----------PDPIHIAVVCPEPEPPPAAAVAPAFDGGDVLESTSAAAGLANSVAAGRRVIGGGISSTG--EGGKV-GSERGQLGAAR-KRIKFVVGVRVLGPPRVVLEGRWYSLPLGRGDAGTGVKFQDPLAVFATVRLPTPLKTCGWGPDPGRQET---LDGAAGAGGKSPTGGAQVGKSGFVDKRVWVTLQVSHGASVRPSDPADCVDVYCSIRPRPGPRPGDHTWWM----------------VGGAXXXXXXXXXXXXGTCGDTRLRQVRIPPSKSLSGEEALPTGFDEGGGGWRRMTIAMPCDHAGAFHVGVYERKGQRRKAAVGGALAKGGEISMKVTRAIEDPLIVRQLRFALDFRRRFCAAGEHDAGDLRVPVSGSGRACQSVHARPFLLASRRLSPSQREHTWRGINEEGTIEVVRSDDEHEQVHTRYTETLKVVTHIF 3711
PPP T D P ++PSP G+R RRRASWS RD R D+E +S+ SP+ VPP LQL+WE QGVSGRAYQ DGN SLY KKKMAARRRL KH+G+RAAIERGWWPYLPLRWV+LN + V+KILPRQGY+ LFT MY TLVPTA EAEA ETA WEY EDAKGLP EL +AGI LGAFS+A+FAVADN WTETV ANDYI+FL +LW+RVRPD+LF P P +P+ D P S + +L G ++ +G R PP PP++P+GL L IPGF +EAQRA W V + R + RG + G G G+ RG+ + ++ Q G+L + + + G ++ DF+ R ++ RE AF LF+ER QP L D + G G G VR YR+++ + A R+ P+ L LL AWRSG++GMTPAEY A++ P +RA+F+AYAIANGWGT+AGG+HS++TL GVA EWR G GRCPE++ +WE+L DL SDGVDL++IPHRLL+D Q S+ R L +RH RASTAPAS+ AA A G+ GG GG GPAGR+LL+GE+VAGSVRQGQ A YQT CPTERG CLEITL S + G GR + P AISLYA+QAP RPLRLS Y W SRGKTHHRLLLNWKG ++ P+P R + + SPW G RGY +P P A P PIH+AVVCPE +APAFDG + AA A+ R + GG + G EGG GS GQ+ R KR++F V VRV+GPPRVVLEGRWYSLP G D G G PLA FAT+RLPTPL+ WGPD ++ LD + AG + +SGFVD VTLQ H DP D VD+YC PRP P P DHTW M V GA XXXXXXX G + G G RMT+AMP DH GAFHVGV+ R +RRK GG A+GG I++KVTR I+D +++QL FA DF RRFC G+ D RVPV GSGRACQ VH RPFLLASRR+SPSQ E++WRG N EG +EV+R + +V TRYTETL+V +F
Sbjct: 157 PPPTVPYDTLARDGRKIDYPPSIPSPCSGRR-RRRASWSGPRDSRRP-----DDEESSECHEVSPRPASVPPLLQLRWERQGVSGRAYQNDGNPSLYRKKKMAARRRLSKHKGIRAAIERGWWPYLPLRWVILNDQHVLKILPRQGYILLFTAMYMTLVPTADEAEAKETARWEYGEDAKGLPQELGRAGITLGAFSEALFAVADN--WTETVRANDYIEFLCVLWERVRPDVLFRPPPLKPESDDPPTAPSQHKGNHAAAAANKIGRRNQKARRKNRPKDGDDDYLRLHEMSRKAANVLGIGDERWRGGGXXXXXXXGREGEALDDNRRAPPTRLPPPQTPDGLQQLRIPGFRSKEAQRAAW------VRHKQRRIVDPGRGVLLAPEGMDGLRGIHRGGG-------------------RGETSGGAKENQXXXXXXXXXXXXXXXXXXXXXTRVTGILKEADRQRDVRTGGGGGYRPKEEEAEVEKEEMESIWDFITRNVPVNSRERDAFILFVERKQPDLLDNNNNINNKNYGRNPDVGVGDQTKPALGRPISSPSPKRPAAXXXXXXXXXXXXXXXXXTVVRRYRTQEATWERARRQTVPSRALGELLEAWRSGQEGMTPAEYGAAFIGPPKRASFLAYAIANGWGTRAGGVHSQQTLDGVAAEWRRGSGRCPEMDALWEVLRDLLWDEAEGAIGEALSDGVDLYSIPHRLLHDPPRGRQGHRSSSSSIRRNSARPVLLSPRQRGDYDHHQQRHRRASTAPASTD------GAAAAEFDGEGVGGGDNGFDRHGGGEGPAGRVLLQGERVAGSVRQGQAAFYQTPCPTERGACLEITLESHDD----GSRAPGRSNDNGIP-TAISLYAVQAPHRPLRLSFYTWVSRGKTHHRLLLNWKGPAAGLKGGDEGTLSPAPSPPRTGAVISSPWDGVRGYTSPRPATASASKPWKPVPPAPIHMAVVCPEXXXX-XXXLAPAFDGSGI--GILAATAQADETLDDRGIFGGVLQEPGRVEGGATRGSVGGQVATPRRKRVRFTVRVRVVGPPRVVLEGRWYSLPFGT-DTGGGTTGPHPLAAFATLRLPTPLRATRWGPDSYPEDPFGDLDVSVFAG--------EEDRSGFVDSETLVTLQARHSTC----DP-DAVDIYCGTSPRPRPSPADHTWRMPIGGXXXXXXSGVAARVPGAPAPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHHGAAG-EVAGAGVSRMTVAMPRDHTGAFHVGVFGR--ERRKTTTGGGTARGGTINIKVTRLIDDQFVLKQLEFAQDFHRRFCPPGDDDE---RVPVLGSGRACQGVHTRPFLLASRRISPSQNEYSWRGTNTEGLVEVLRDSNRPGRVLTRYTETLQVCRLVF 1487
BLAST of mRNA_P-fluviatile_contig10.756.1 vs. uniprot
Match: A0A6H5K4Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Z7_9PHAE) HSP 1 Score: 520 bits (1339), Expect = 3.330e-160 Identity = 425/1150 (36.96%), Postives = 520/1150 (45.22%), Query Frame = 1
Query: 52 DSPSAMPSPRLGQRQRRRASWSSVRDFRLARGFARDEETTSDDEGCSPKH-KVPPRLQLQWEMQGVSGRAYQKDGNLSLYHKKKMAARRRLFKHEGVRAAIERGWWPYLPLRWVVLNVKEVVKILPRQGYVRLFTTMYATLVPTAGEAEAVETANWEYMEDAKGLPSELSKAGIPLGAFSDAMFAVADNASWTETVLANDYIKFLDLLWKRVRPDILF-PRPKQPDGDKP---------------------------------------------SNFSTTMLKAGPKKRQGA------------------RPPPPLTKPPRSPEGLLVLDIPGFSPREAQRAMWAWKGGYVDPEVERTLRLARGSV----GSSGDAGVXXXXXXXXXXXXXXXXXXXXGATRRGDLTPRQQQGQGRGWKQKEAKQLGCNTRGRQQLLAAGMLDDWEGLSERAGAGXXXXXXXXXXXXXXXXXXXTLRDFMARYFALDPREGFAFSLFLERMQPGLFDGGSEEGGNKIGGKYGGGRG--------------------------------------------RVRSYRSEDEVTQMALRRKFPTSVLEGLLAAWRSGKKGMTPAEYRTAYVEPSQRANF----------VAYAIANGWGTKAGGLHSRETLGGVAEEWRLGGGRCPEVEVVWEILDDLXXXXXXXXXXXXFSDGVDLHTIPHRLLYDVAPQAQAQAQCRSN----------PRLRXXXXXXXXXIDRRHVRASTAPASSTTATRVVAAAVAATSGKRDGGT-------GGMGPAGRILLRGEKVAGSVRQGQIAHYQTLCPTERGECLEITLVSEGEPAERGRGGSGRRPSSSCPPAAISLYAIQAPQRPLRLSPYPWASRGKTHHRLLLNWKGSSSF---SSFSCSPPSPLSLRPLSSLCSPWRGDRGYAAPNPVGAPDPIHIAVVCPEPEPPPAAA---------------VAPAFDGGDVLESTSAAAGLANSVAAGRRVIGGGISSTG---EGGKVGSERGQLGAARKRIKFVVGVRVLGPPRVVLEGRWYSLPLGRGDAGTGVKFQDPLAVFATVRLPTPLKTCGWGPDPGRQETLDGAAGAGGKSPTGGAQVG-------KSGFVDKRVWVTLQV 2997
DSP ++ SP GQR RRRASW R R RD E S+ SP+ VPP LQL+WE QGVSGR YQ DGN SLY KK GY+ LFT MY TLVPTA EAEA ETA WEY EDAKGLP +L +AGI LGAFS+A+FAVADN WTETV + DYI+FL LLW+RVRPD+LF P P +P+ D P S + +L G ++ +G R PP PP++P+GL L IPGF P+EAQRA W V + R + RG + G G G+ +G+ + GR++ G+L + + + G ++ DF+ R AF LF+ER +P L D + G G G VR YR+++ + A R+ P L LL AWRSG++GMTPAEY A++ P Q + V+YAIANGWGT+AGG HS++TL GVA EWR G GRCPE++ +WE+L DL SDGVDL++IPHRLL+D Q S+ P L +RH RASTAPAS+ A AAV G DGG GG GP GR+LL+GE+VAGSVRQGQ A YQT CPTERG CLEITL S + R RG R + + P AISLYA+QAP RPLRLS Y W SRGKTHHRLLLNWKG ++ P+P R + SPW G RGY +P P A + P PPA +APAFDG + AA A+ R + GG + +G GS Q+ RKR++F V VRV+GPPRVVLEGRWYSLP G D G G+ PLA FAT+RLPTPLK WGPD + P G V + GFVD VTLQV
Sbjct: 168 DSPPSILSPCSGQR-RRRASWPGPRGSRR-----RDNEQPSECHKASPRAASVPPSLQLRWERQGVSGRTYQNDGNPSLYRKK---------------------------------------------GYMLLFTAMYMTLVPTADEAEAKETARWEYGEDAKGLPQDLGRAGITLGAFSNALFAVADN--WTETVRSKDYIEFLCLLWERVRPDVLFRPLPLKPESDDPPXXXXXXXXXXXXXXXXXIGRRNQKARRKNWGNDGDDDNSRLHEKSPKAANVLGIGDERWRGGXXXXXXXXREGEALDDDRRAPPTRLPPPQTPDGLQQLRIPGFRPKEAQRAAW------VRYKQRRIVDPGRGILLTPEGMDGARGIHRGGG-------------------KGENSGXXXXXXXXXXXXXXXXXXXXXXMGRRRTRVTGILKEADRQRDVRTGGGGGYRPKEEEVEVEMEKMESIWDFITRX--------DAFILFVERKRPDLLDNNNNINNKNYGRNSDVGAGDQTKLALGRPNSSPSPKRPAAXXXXXXXXXXXXXXXXXXXXXXXXVRRYRTQEATWERARRQTVPARALGELLEAWRSGQEGMTPAEYGAAFIGPLQARDRGAAAWLMRGRVSYAIANGWGTRAGGCHSQQTLDGVAAEWRRGRGRCPEMDALWEVLRDLLWDEAEDAIDEALSDGVDLYSIPHRLLHDPPRGRQGHRSSSSSIRSIRRSSTRPVLPSPRQRGDYDHQQRHRRASTAPASTDGA-----AAVEFDGGGVDGGDNGFDRHGGGKGPEGRVLLQGERVAGSVRQGQAAFYQTPCPTERGACLEITLESH-DTGSRARG----RSNDNGIPTAISLYAVQAPHRPLRLSFYTWVSRGKTHHRLLLNWKGPAAGLKGGDEGTLSPAPSPPRTGKLISSPWDGVRGYTSPRPATA------SASKPWKPVPPAXXXXXXXXXXXXXXXXXLAPAFDGSGI--GILAAPDQADETLDDRGIFGGDLQEPARVVDGATTGSVGRQVAPTRKRVRFTVRVRVVGPPRVVLEGRWYSLPFGT-DTGEGMTGPHPLATFATLRLPTPLKATRWGPDSYPAD------------PFGDRDVSVFSGEEDRPGFVDSATLVTLQV 1200 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.756.1 >prot_P-fluviatile_contig10.756.1 ID=prot_P-fluviatile_contig10.756.1|Name=mRNA_P-fluviatile_contig10.756.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1237bp PPPFRQTTTAVAPNESGDSPSAMPSPRLGQRQRRRASWSSVRDFRLARGFback to top mRNA from alignment at P-fluviatile_contig10:1961654..1976065+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.756.1 ID=mRNA_P-fluviatile_contig10.756.1|Name=mRNA_P-fluviatile_contig10.756.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14412bp|location=Sequence derived from alignment at P-fluviatile_contig10:1961654..1976065+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:1961654..1976065+ >mRNA_P-fluviatile_contig10.756.1 ID=mRNA_P-fluviatile_contig10.756.1|Name=mRNA_P-fluviatile_contig10.756.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7422bp|location=Sequence derived from alignment at P-fluviatile_contig10:1961654..1976065+ (Porterinema fluviatile SAG_2381)back to top |