mRNA_P-fluviatile_contig10.745.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D7FXJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ3_ECTSI) HSP 1 Score: 476 bits (1225), Expect = 6.680e-162 Identity = 250/457 (54.70%), Postives = 298/457 (65.21%), Query Frame = 1
Query: 37 VASLLSVFGGRASGWEDCVMSPDDEWKKADKLIPALRMRYDFERRYTCTNLKASFLAASYFFDSPCMSQKFFYVSEIKSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEVDSDGRNYFTLTECWHPAENSISQVERCYDYYSRDFAHHFAKATHNSGGQVGRTGGKTVQLPLPPRRTAWMPACHTR-VGFLSPASKQHNNNPQIEVDKARGHGTRQRRALAGEGDGGSGETLGQRRAAAEADDDGFSVHMRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGADHHSCPDHG-MDCRHWSEPGVVEEWNRLLLSHVC 1401
V L V G+ASGW +C+M P D WK A PALRMRYD+ERRYTC + KASFLAASY F+S C +++F ++ SCLKGRRVIFLGDSLSNQQGDSLLGMLGWHP WM KG P NAK+ + DG+ Y+TL +CWHP SI VERCYDY + DF T G G +G T Q R+ PA +G S + + R G+ E G R D+ SVHMRM+S P G W +A+ D+NETR SD+ VVNFGGHYHD PE+D FK+DV PILD MA LG+KATVVWREIAPTHFPA NGSFD++D L + ++K C GTPPEV+DRN+WVENY+RDNGL DR+KLLRIY MS+PRGAAHHTC+ APPST +Q A G +DCRHWSE GVVEEWN L+L+H+C
Sbjct: 31 VILFLGVIVGKASGWVECLMPPQDAWKAATDTTPALRMRYDYERRYTCRDEKASFLAASYVFNSTCTARRFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKV-ITEDGKRYYTLVDCWHP---SIKGVERCYDYSTSDFP---GPTTLGQPGD-GPSGEATTQSRKNMARSTTSPAKRRPPLGGTKADSTKSVXXXXXXXXXXXXRKMQAREWEDGQEAAEEAEAEGYREEVEAVDESEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEKATVVWREIAPTHFPAVNGSFDAFDGLESKDRKAS--CTGTPPEVFDRNVWVENYVRDNGLEDRIKLLRIYDMSMPRGAAHHTCHFAPPSTMNQSEAAIDGRGVSGPLDCRHWSETGVVEEWNALMLNHLC 477
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D7FL04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL04_ECTSI) HSP 1 Score: 452 bits (1162), Expect = 5.050e-152 Identity = 244/498 (49.00%), Postives = 304/498 (61.04%), Query Frame = 1
Query: 1 PRISGLALLVVWVASLLSVFGGRASGWEDCVMSPDDEWKKADKLIP--ALRMRYDFERRYTCTNLKASFLAASYFFDSPCMSQKFFYVSEIKSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEVDSDGRNYFTLTECWHPAENSISQVERCYDYYSRDFAHHFA--------KATHNSGGQVGRTGGKTVQLPLPPRRTAWMPACHTR----VGFLSPASKQHNNNPQIEVDKARGHGTRQRRALAGEGDGGS---------------GETLGQRRAAAEADDDGFSVHMRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGA--DHHSCPDHGMDCRHWSEPGVVEEWNRLLLSHVC 1401
P + LLV V L V G+ASGW++C +SP+D W A ALRMR+D+ERRYTC + AS+LAASY+FDSPC +++F ++ SCLKGRRVIFLGDSLSNQQGDSL+GMLGWHP WM KGAP N+K++++ DG +FTL +C+HP S+ ++RCYDY + F A K+ + G T + V+L + R T + T+ +G S++H GHG + + GET + D + SVHMRM+S P G W KA D+NETR SDV VVNFGGHYHD+PEDD FK D+ P+L MA LG ATV+WREIAPTHFPA NGS+DS+ L D K C GTPP+V+DRN WVENY+RDNGL DR+KLLRIY MSVPRGAAHHTC+ APPST Q D +DCRHWSE GVVEEWN L+L+H+C
Sbjct: 21 PSFAASGLLVPSVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYYFDSPCTARRFPSPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKLDIE-DGSKHFTLVDCYHP---SLGGIQRCYDYSTSAFPPPAASDHPVSREKSRKKKSIRAGATSSEKVKLSMRGRTTTAIKTAQTKGTRGLGHKRRKSQRHGR----WWXXGEGHGQEEEEEVEXXXXXXXXXXXXXXXXXXXXXYGETF-------DVDGNEISVHMRMLSRPSGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQNATVIWREIAPTHFPAANGSYDSYADL--DAKDLTPRCTGTPPKVFDRNEWVENYVRDNGLEDRIKLLRIYDMSVPRGAAHHTCHFAPPSTMKQPRVKNDGRGAASGPIDCRHWSETGVVEEWNTLMLNHLC 501
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: A0A6H5JEC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC7_9PHAE) HSP 1 Score: 443 bits (1139), Expect = 4.870e-149 Identity = 235/471 (49.89%), Postives = 291/471 (61.78%), Query Frame = 1
Query: 28 VVWVASLLSVFGGRASGWEDCVMSPDDEWKKADKLIPALRMRYDFERRYTCTNLK-ASFLAASYFFDSPCMSQKFFYVSEIKSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEVDSDGRNYFTLTECWHPAENSISQVERCYDYYSRDFAHHFAKATHNSGGQVG-RTGGKTVQLPLPPRRTAWMPACHTRVGFLSPASKQHNNNPQIEVDKARGHGTRQRRALAGEGDGGSGETLGQRRAAAEAD-------DDGFSVHMRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGADHHSCPD-HGMDCRHWSEPGVVEEWNRLLLSHVCDAA 1410
+V V L+V GW +C +SP DEWK+A + A+RMR ++ER YTCT + ASF+AA+Y+FDSPC++++FFY ++++ CL+GRRVIFLGDSLSNQQGDSL+GMLGWHP WM +G P N K V DG YFTL +CWHP SI +ERCYD Y DF + H S G+ G T T G + +H+ + RR+L EGD G E + SVH+RM S W +A+RDYNETR SDVVVVNFG HY PE + FK+DV+ ILD MA +G+ ATVVWREIAPTHFP NG+++S+ L + CC GTP +V DRN WVE+Y+RDNGL+DRVKLLRIY MSVPRGAAHHTC+LAPPST DQ GA+ C + DCRHWSE GVVEEWN LLL+H+C A
Sbjct: 38 LVLVLIFLTVASPTGWGWNECSISPQDEWKEATEDTLAMRMRAEYERMYTCTTREDASFMAANYYFDSPCLAKRFFYPTDVRECLRGRRVIFLGDSLSNQQGDSLVGMLGWHPEWMPRGGPRNRKRAVRKDGTRYFTLVDCWHPPGGSIPGIERCYDVYDTDFPF---EGNHRSPGKPSLEIHGST-----------------TDDGAFASTEGKHDRRTR-------------RRSL--EGDEGGVEXXXXXXXXXXXXXXXXTKANQTTSVHVRMTSTADDRHWLRRALRDYNETRASDVVVVNFGPHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWREIAPTHFPGENGTYESFVEL---DLGNNACCTGTPVKVLDRNAWVEDYVRDNGLSDRVKLLRIYDMSVPRGAAHHTCHLAPPSTMDQAGAESDYCHSVYATDCRHWSETGVVEEWNALLLNHLCPMA 470
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: A0A6H5KLA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA9_9PHAE) HSP 1 Score: 427 bits (1099), Expect = 1.080e-142 Identity = 235/477 (49.27%), Postives = 286/477 (59.96%), Query Frame = 1
Query: 37 VASLLSVFGGRASGWEDCVMSPDDEWKKADKLIPALRMRYDFERRYTCTNLKASFL---------AASYFFDSPCMSQKFFYVSEIKS----------CLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEVDSDGRNYFTLTECWHPAENSISQVERCYDYYSRDFAHH--FAKATHNSGGQVGRTGGKTVQLPLPPRRTAWMPACHTRVGFLSPASKQHNNNPQIEVDKARGHGTRQRRALAGEGDGGSGETLGQRRAAAEADDDGFSVHMRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGADHHSCPDHG-MDCRHWSEPGVVEEWNRLLLSHVC 1401
V L V G+ASGW++C++SP D WK A ALRMRY++ERRYTC + K + A DSP + + +K CLKGRRVIFLGDSLSNQQGDSLLGMLGWHP WM K NAK+ + DG+ Y+TL +CWHP SIS VERCYDY + DF F + G+ + K V P + AS + +N+ K + + A E E G D++ SVHMRM+S P G W +A+ D+NETR SD+ VVNFGGHYHD PE+D FK+DV PILD MA LG+KATVVWREIAPTHFPA NGSFD++D L + ++K C GTPPEV+DRN+WVENYLR NGL DR+ LLRIY MSVPRGAAHHTC+ APPS +Q A G +DCRHWSE GVVEEWN L+L+H+C
Sbjct: 23 VILFLGVVVGKASGWKECLVSPQDAWKAATDTTAALRMRYEYERRYTCRDEKGALQGPTPNSLAHARRKSDDSPPLVLSCLDANSLKRLNKESTSMQVCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKENLRNAKV-ITEDGKRYYTLVDCWHP---SISGVERCYDYSTSDFPGPTTFGQPGDGPSGEARKQSRKKVFRSTPSSTKRSTSLGGRKADSTKSASTEGDNSRNKHGRKLQPREWEDGQEAAEEA-----EAEGYGEEVEAVDENEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEKATVVWREIAPTHFPAVNGSFDAFDCLESKDRKAS--CTGTPPEVFDRNVWVENYLRTNGLEDRIHLLRIYDMSVPRGAAHHTCHFAPPSPMNQSEAASDGGGASGPLDCRHWSETGVVEEWNTLMLNHLC 488
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D7G6G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G2_ECTSI) HSP 1 Score: 285 bits (728), Expect = 2.050e-88 Identity = 169/436 (38.76%), Postives = 218/436 (50.00%), Query Frame = 1
Query: 202 LAASYFFDSPCMSQKFFYVSEIKSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEVDSDGRNYFTLTECWHPAENSISQVERCYDYYSRDFAH--------------HFA----KATHNSGGQ----------VGRTGG-------KTVQLPLPPRRTAWMPACHTRVGFLSPASKQHNNNPQIEVDKARGHGTRQRRALAGEGDGGSGETLGQRRAAAEADDDGFSVHMRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGADHHSC-PDHGMDCRHWSEPGVVEEWNRLLLSHVC 1401
+AA+Y+FDSPC++++FFY ++++ ++ DG +YFTL +CWHP SI+ +ERCYD Y DF H + +A+ ++GG G GG +E G GE +G GET + SVH+RM S W +A+RDYNETR SDVVVVNFG HY PE + FK+DV+ ILD MA +G+ ATVVWREIAPTHFPA NG+++++ L + CC GTP +V DRN WVE+YLR+NGL+DRVKLLRIY MSV RGAAHHTC+LAPPST DQ GA+ +C + DCRHWSE GVVEEWN LLL+ +C
Sbjct: 1 MAANYYFDSPCLAKRFFYPADVREAVR-------------------------------------------EDGTSYFTLVDCWHPPGGSITGIERCYDVYETDFPSEGNYRRPGKPFLEGHVSTTKDRASASTGGNHDRRNKRRSLEGDEGGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEXXXXXXXGG----VKKGEKEGEEGETTKANQTT--------SVHVRMTSAADDQHWLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWREIAPTHFPAENGTYEAFVEL---DLGNTACCTGTPVKVLDRNAWVEDYLRENGLSDRVKLLRIYDMSVSRGAAHHTCHLAPPSTMDQTGAESGNCHSSYATDCRHWSETGVVEEWNALLLNQLC 378
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D7FKZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ2_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.090e-84 Identity = 127/195 (65.13%), Postives = 144/195 (73.85%), Query Frame = 1
Query: 823 MRMMSFPRGADWFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGA--DHHSCPDHGMDCRHWSEPGVVEEWNRLLLSHVC 1401
MRM+S PRG W KA D+NETR SDV VVNFGGHYHD+PEDD FK D+ P+L MA LG ATV+WREIAPTHFPA NGS+DS+ L D K C GTPP+V+DRN WVENY+RDNGL DR+KLLRIY MSVPRGAAHHTC+ APPST Q D +DCRHWSE GVVEEWN L+L+H+C
Sbjct: 1 MRMLSRPRGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQNATVIWREIAPTHFPAANGSYDSYADL--DAKDLTPRCTGTPPKVFDRNEWVENYVRDNGLEDRIKLLRIYDMSVPRGAAHHTCHFAPPSTMKQPRMRNDGRGAASGPIDCRHWSETGVVEEWNTLMLNHLC 193
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D8LML8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML8_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.210e-78 Identity = 117/183 (63.93%), Postives = 140/183 (76.50%), Query Frame = 1
Query: 856 WFEKAMRDYNETRPSDVVVVNFGGHYHDVPEDDVRFKKDVAPILDSMARLGDKATVVWREIAPTHFPATNGSFDSWDSLSNDEKKKQLCCVGTPPEVYDRNLWVENYLRDNGLTDRVKLLRIYSMSVPRGAAHHTCNLAPPSTKDQKGADHHSC-PDHGMDCRHWSEPGVVEEWNRLLLSHVC 1401
W +A+RDYNETR SDVVVVNFG HY PE + FK+DV+ ILD MA +G+ ATVVWREIAPTHFPA NG+++++ L + CC GTP + DRN WVE+YLR+NGL+DRVKLLRIY MSVPRGAAHHTC+LAPPST DQ GA+ +C + DCRHWSE GVVEEWN LLL+ +C
Sbjct: 10 WLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWREIAPTHFPAENGTYEAFVEL---DLGNTACCTGTPVKFLDRNAWVEDYLRENGLSDRVKLLRIYDMSVPRGAAHHTCHLAPPSTMDQTGAESGNCHSSYATDCRHWSETGVVEEWNALLLNQLC 189
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Match: D7FKZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ3_ECTSI) HSP 1 Score: 174 bits (441), Expect = 2.240e-48 Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 1 PRISGLALLVVWVASLLSVFGGRASGWEDCVMSPDDEWKKADKLIP--ALRMRYDFERRYTCTNLKASFLAASYFFDSPCMSQKFFYVSEIKSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPSWMKKGAPGNAKMEV 408
P ++ LLV +V L V G+ASGW++C +SP+D W A ALRMR+D+ERRYTC + AS+LAASYFFDSPC +++F + ++ SCLKGRRVIFLGDSLSNQQGDSL+GMLGWHP WM KGAP N+K+E
Sbjct: 31 PSLAASGLLVPFVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYFFDSPCTARRFPFPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKVET 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.745.1 >prot_P-fluviatile_contig10.745.1 ID=prot_P-fluviatile_contig10.745.1|Name=mRNA_P-fluviatile_contig10.745.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=441bp MSPDDEWKKADKLIPALRMRYDFERRYTCTNLKASFLAASYFFDSPCMSQback to top mRNA from alignment at P-fluviatile_contig10:1811229..1817710+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.745.1 ID=mRNA_P-fluviatile_contig10.745.1|Name=mRNA_P-fluviatile_contig10.745.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6482bp|location=Sequence derived from alignment at P-fluviatile_contig10:1811229..1817710+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:1811229..1817710+ >mRNA_P-fluviatile_contig10.745.1 ID=mRNA_P-fluviatile_contig10.745.1|Name=mRNA_P-fluviatile_contig10.745.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2646bp|location=Sequence derived from alignment at P-fluviatile_contig10:1811229..1817710+ (Porterinema fluviatile SAG_2381)back to top |