mRNA_P-fluviatile_contig10.613.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.613.1 vs. uniprot
Match: D8LTM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM0_ECTSI) HSP 1 Score: 228 bits (582), Expect = 4.710e-58 Identity = 144/328 (43.90%), Postives = 191/328 (58.23%), Query Frame = 1
Query: 505 MPVAAFPALFEVAALSVGLTVSCIVGFRHAAR---CLGSGXXXXXXXVGCKISATPLYGSGLSASLLAAFCCMYGLIYWFNGTNGHDCLAYSVVMNTCLKASNGLSLLYLFILSNMLHQTNARWRVLRWLGLVLTAFHWGVLVASEATRTA-EEVHAGASAAVSSAFIGNGMDVGAGIDAAVAVITARCLTRVDDAAFSVQWVAQLFSQVFQAVTFLIPLVKQEARVARVRSIYGVGFTYPGKNRYMKNTGILKVWQSIVAVSVSLLMTIVVASLALAKAQGQLDSMPMFAVEILDNTVNLAATFYAIH----AIPVRNPVPMPNMVP 1464
MP F ALFEVAAL LTV+ +VG R R C G+ +SA SGL+A+LL F C+ GL YWFNG G+DCLA+S VM L ASN ++ ++LFILSN +H+ N+RW+ RWLG+++T FHW LVA E TRTA +E H G + +RC+T VD A +V+WVAQL +Q+FQ V FL+PL A A ++ G G R N + VWQ+I++ +SL+MTI VA +ALAKA+G L + P+FAVE+LDN VNLAA FYA+H + P+R P+ +M P
Sbjct: 1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTAD----------LSAAV---SGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAG------------------------ESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLN---ISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVHRRYSSGPIRRLPPVVDMSP 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.613.1 >prot_P-fluviatile_contig10.613.1 ID=prot_P-fluviatile_contig10.613.1|Name=mRNA_P-fluviatile_contig10.613.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=989bp MPVAAFPALFEVAALSVGLTVSCIVGFRHAARCLGSGSGNGGGGVGCKISback to top mRNA from alignment at P-fluviatile_contig10:61061..72806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.613.1 ID=mRNA_P-fluviatile_contig10.613.1|Name=mRNA_P-fluviatile_contig10.613.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11746bp|location=Sequence derived from alignment at P-fluviatile_contig10:61061..72806- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:61061..72806- >mRNA_P-fluviatile_contig10.613.1 ID=mRNA_P-fluviatile_contig10.613.1|Name=mRNA_P-fluviatile_contig10.613.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5934bp|location=Sequence derived from alignment at P-fluviatile_contig10:61061..72806- (Porterinema fluviatile SAG_2381)back to top |