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Homology
BLAST of mRNA_P-fluviatile_contig10.611.1 vs. uniprot
Match: D8LTM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM5_ECTSI) HSP 1 Score: 202 bits (515), Expect = 7.450e-60 Identity = 103/129 (79.84%), Postives = 114/129 (88.37%), Query Frame = 3
Query: 237 LLRVDFERAKFEELREWIQRYPFGTALPVQPFSLMETETGVDVVFRKKPTLERGSQDGGLSFSVEDTVD-EGVDIPAGPTLIMRRISEGQEIRKVFAERIVVKAVVRSLVEGGAPPGLKVRTVLHEGLI 620
LLR+DFE A EELR+WI+RYPFGTALPVQPFSL+ET TGVDVVFRKKPTLERGSQDGGL F++ED V E +D+ GPTLIMRRISEGQEIRK+FAERIVVKAVV+SL GAPPG KVRTVLHEGL+
Sbjct: 28 LLRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV 156
BLAST of mRNA_P-fluviatile_contig10.611.1 vs. uniprot
Match: A0A7S0L9D0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9D0_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 2.070e-14 Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 3
Query: 237 LLRVDFERAKFEELREWIQRYPFGTALPVQPFSLMETET----GVDVVFRKKPTLERGSQDGGLSFSVEDTVDEGVDIPAGP-TLIMRRISEGQEIRKVFAERIVVKAVVRSL 560
LL+V R L++W+ R PF +ALPVQP ++ + G+D+ FR+KPT+++ S +GGL F+V D + G L++ R+S GQ I K F+ER++++ ++R L
Sbjct: 29 LLKVTLARCDSHGLQQWLLRRPFASALPVQPMLVLPIKDPPPLGIDLTFRRKPTMDKSSSEGGLRFAVSAPGDGEAGVVDGDGILLVTRVSSGQSIGKGFSERVLIEMLLREL 141
BLAST of mRNA_P-fluviatile_contig10.611.1 vs. uniprot
Match: A0A7S0P2Y7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P2Y7_9EUKA) HSP 1 Score: 80.1 bits (196), Expect = 4.030e-14 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 3
Query: 237 LLRVDFERAKFEELREWIQRYPFGTALPVQPF---SLMETETGVDVVFRKKPTLERGSQDGGLSFSVEDTVDEGVDIPAGPTLIMRRISEGQEIRKVFAERIVVKAVVRSL 560
LL+V + L++W++R PF LP+QP +L + GVDV FR+KP+ E+G+QDGG+ ++ G D +L++ RISEGQ K F+ER + +++VR L
Sbjct: 37 LLQVRLSSVNSDALQDWLRRRPFAAVLPIQPMLVQALQPPQQGVDVTFRRKPSSEKGAQDGGIRIAI------GHD-----SLLVTRISEGQYTSKAFSERALCRSIVRDL 136
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 203.4 |
| Seed ortholog evalue | 9.9e-50 |
| Seed eggNOG ortholog | 2880.D8LTM5 |
| EggNOG OGs | 2EA7H@1,2SGGG@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Model size | 1454 |
| Cds size | 588 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815362.3797183-UTR-P-fluviatile_contig10:39405..40230 | 1622815362.3797183-UTR-P-fluviatile_contig10:39405..40230 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig10 39406..40230 - |
| 1693561611.139939-UTR-P-fluviatile_contig10:39405..40230 | 1693561611.139939-UTR-P-fluviatile_contig10:39405..40230 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig10 39406..40230 - |
| 1622815362.4631138-UTR-P-fluviatile_contig10:44590..44631 | 1622815362.4631138-UTR-P-fluviatile_contig10:44590..44631 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig10 44591..44631 - |
| 1693561611.1990743-UTR-P-fluviatile_contig10:44590..44631 | 1693561611.1990743-UTR-P-fluviatile_contig10:44590..44631 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig10 44591..44631 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815362.395948-CDS-P-fluviatile_contig10:40230..40344 | 1622815362.395948-CDS-P-fluviatile_contig10:40230..40344 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 40231..40344 - |
| 1693561611.1508691-CDS-P-fluviatile_contig10:40230..40344 | 1693561611.1508691-CDS-P-fluviatile_contig10:40230..40344 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 40231..40344 - |
| 1622815362.413433-CDS-P-fluviatile_contig10:40986..41125 | 1622815362.413433-CDS-P-fluviatile_contig10:40986..41125 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 40987..41125 - |
| 1693561611.1614678-CDS-P-fluviatile_contig10:40986..41125 | 1693561611.1614678-CDS-P-fluviatile_contig10:40986..41125 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 40987..41125 - |
| 1622815362.4303434-CDS-P-fluviatile_contig10:41735..41816 | 1622815362.4303434-CDS-P-fluviatile_contig10:41735..41816 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 41736..41816 - |
| 1693561611.1789606-CDS-P-fluviatile_contig10:41735..41816 | 1693561611.1789606-CDS-P-fluviatile_contig10:41735..41816 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 41736..41816 - |
| 1622815362.445954-CDS-P-fluviatile_contig10:44336..44590 | 1622815362.445954-CDS-P-fluviatile_contig10:44336..44590 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 44337..44590 - |
| 1693561611.1888878-CDS-P-fluviatile_contig10:44336..44590 | 1693561611.1888878-CDS-P-fluviatile_contig10:44336..44590 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig10 44337..44590 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.611.1 >prot_P-fluviatile_contig10.611.1 ID=prot_P-fluviatile_contig10.611.1|Name=mRNA_P-fluviatile_contig10.611.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp
MFRQSVKVVAALVALLCPTVRAFRSAANIQLKASQGSGNPSWTKPRRDRS TRYHMGVKEEILRPTLLRVDFERAKFEELREWIQRYPFGTALPVQPFSLM ETETGVDVVFRKKPTLERGSQDGGLSFSVEDTVDEGVDIPAGPTLIMRRI SEGQEIRKVFAERIVVKAVVRSLVEGGAPPGLKVRTVLHEGLIQT* back to topmRNA from alignment at P-fluviatile_contig10:39406..44631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig10.611.1 ID=mRNA_P-fluviatile_contig10.611.1|Name=mRNA_P-fluviatile_contig10.611.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5226bp|location=Sequence derived from alignment at P-fluviatile_contig10:39406..44631- (Porterinema fluviatile SAG_2381) AAACAGCAGCACCGCGCACGGCGCACATCGCCCATCAAGCGATGTTCAGA
CAATCGGTGAAAGTGGTGGCAGCTCTCGTGGCTCTTTTGTGTCCTACAGT
GAGGGCGTTCCGCTCAGCAGCAAATATTCAGCTGAAGGCCTCCCAAGGAA
GCGGGAATCCAAGTTGGACGAAGCCACGGCGTGACCGATCCACACGCTAT
CACATGGGAGTCAAAGAGGAGATCTTGAGACCTACGTTGTTAAGGGTGGA
CTTCGAACGTGCAAAGTTCGAGGAGTTGCGAGAATGGATCCAAAGGTTGG
TTTGTTGCCGTGCATTGCTGCAGGAATAAGGAAGGAGAGTTGACAACAGC
AGTGGATGTCCGTGCGTGTTTCCTCGCGCTATTGGTGTAATGGTAGGTCG
AACTGTTGTTGTGAAACACAGCGCCATTCTAATTCAGCTTCCCCCCCCCC
GTCATGCCATATCTTCCGTAGCTGGTTTGGTAACGCGGCAACTGCATACA
TGACGGGCGGCGTATTAAAAGATAGCGCGGTGTGCGGTCACCGATCAGTG
GTCAAACTAGTGTACAGTTCGTCGAGAGAGCCCTCGCTGTAAGGAGTCCC
ACACAAGGCAGCTGCGAGTCCGGTCCGTCTCAGAGGGTGTAATTTCTCTT
CTTGGTACTGGTTTTTGTTTCAGAGCCCTCACACTTGGCCTTCAAATTTA
ACGCTGACGCCGAATGAGGCGACAATTTTTAGTCTCTCTAGCCTTCTTGA
AGCGTAACTCTTGAGTTCCTTCCTGGCGTTCCGAACCTGAACCTGGTGAG
CAACGAGATTTTTCATCAGTGCTACCTGTGGTGGACCACACCAGCTAGGA
ACATCGGCCACCAGCAGATCCGAACATTTTGGAAGGGTTGTGGATATCCT
TCAGGTCGTGACGCGGTTTTCGTTTGTCCTACGTGTCAAATTTGGTTGCG
TGCGAACATTGAAATGTTTTGGGTTTCGCCCACTCGTCGAGATTTGGGCT
GCTAGTGTACTTGGTGTGTGTGTGTGTTTTCGTCACTTTATTGGCGACAG
TCCCTCCGATCAAGGCGAGACGTTTACTGCGCTTTGCAGCATACTTGGAG
GACTACACTTGTTCAGTGTATGTTTCTGTCCAGCTAGAATCAACCGTGGT
CACACAGGAGGGGGTAAACGCCGGGACTTTTTTCTTCTTTTTCTTTTCCT
TTTGTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTCATTTTTATCGCGAG
AAGGGTTCAGCCGTCCCTTTCCCTCGTCGACCGCTACGTCGAGTTTCGTG
TACTCACGAAGCTTTTCAGCTTTTCGCCGCTTTCTACTCCCAGGTGCGAA
AGTGAGAAAACACCAGTCTCGCCGAGATTCGAACCCGTGACCCGGGTGCT
AGAAGGTTACGAGGATACCAACTAGACCACCGGGGCATTAGATCTAGACT
TTGGAATGATAAAAGAAAGTGAAAACTAACGTCGATTTCGCCACACGTAC
CTGATTGCGCGCATGCCCAGGATCCCGCTTATCCGCTCATGCCACAGGTC
GTATCAGATATCACACCTCCTGGATCGATTTCGATATCTCGACGGGACGA
TCTCTCGACAGCTAGGAGTTGCCTGACATGAACGATGTGTCGCTACAAAG
CTCTCGACAGCTTCTCTCGAAAGCCGCTTCGTTTGACGAAATCACTTTTT
GAACCGCGGAGAAATTGAGCATTGAAAATCGACTCGGGTGTGTGATATCA
TTTGTGACCTACGGCAGTAGTTGCAGACGAGCAGACCTTTCCAACAACCC
TGGCATGACTTCCCTTTGTTGGGATCTGTTAGTATATGAAATGGGTAGCC
GTTTGGATATAGTGTTCGTTTGGATCCTGTCATCATGCCGGTCCGGGCTG
ATATCCTGTCCCCGCGGCAGTATCCAAGTGCCGCTGGCAAGTTGTATGAT
TTCGATATTCACACGGCAGAACACTATGCTCCGCTGCATGCAGGCGCATG
AGCTCCCTCTCTCGTGCAGGGGCATGAGCCCCATCTCGTGCAGTTGCCTC
GAGGAGCAGTGATTGCGATGAGGAGAATAGAAACGGACAAACCAGAGCGG
GTCGACCTGTAGTATGGTAGTCGGTTAAGCTTTATGCCTCAATGTTTCAC
AAGCACGGCGCAAAATGTGAAGGTTTTAAATTACTCAGCCAGTCGGGTAC
AAGCCAAACCGAATACTCGACTGGGGTCTGATCTTATACCGGATCGCTTT
GCGCTTGTGCGCGAGGACGTGTTATATTATCACGCCACCACACGCCGTGA
TCTAAAATATAGGGGGGCATTGATCGTGCGGAGGTGGGACGAGAATTGTC
ACCCTCATCAAAGCGGACCCGCCCACGGTTGAGACGTGGGTAACTTGGAT
CATTTGGTTTGTGCGAGAACTTACACGCCAACTGATTCCAACCGCATCCG
GTGCCCTGTATGATTTTTTTGTTTGTTGCGCCGGGTGTTCGGCTCTCGTT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCCCTTTCGCTCTCTGCGTCGTACTCTCTCTTTCGC
TTCCCCCACGTGCTCCCCCCGCTCTGTCTTACGGCAAGCATTTTGGCCGT
GACATGCTTTTGGTTTCGAAGTTGGCGAGAGACTGATGAAGCATGAATGA
TTTCGGGGCATTTTCTCGTCGCTTATCTGTGGAGGTATCAATTATTAGGT
GCCTCGGTCTCTCAGTTTCGGCGTGAACCGGCCCCCTACTATCCCCATGC
CACGAACACGGACAGGTACCCATTTGGAACGGCCTTACCAGTTCAGCCGT
TCTCGCTGATGGAGACAGAGACGGGCGTCGATGTCGTGTTCAGAAAGTGA
GGGCACTACTGGTTCTCGCCTAATATAATTCTTCATTGAAACGATATTTT
TCCCGTCAGAGCCGTGTTTGGCATAGGTCTAGTTTGCTTGAAGGGAAATC
CAGCCGGTCGTGTTCAATCTTCGTAGGCTAGCCGGAAGTCTACAACTGTT
TCGCTTTCCATCTGCAAAAGCCTAGGAAAGGGAGTAAAATAACAAACACA
AGTCAACAGACGATCAACATTCTGAAGGCCACGACTGGCTGCGGATGCCC
ACGGGTCTCACTCATCTTTACCTTACGGCATATGAGTTGCATGTGTTCAT
GGTAGACCTTGAGCCCCTGGTGTCAGTCACTGTGCCGGCGTATTGTACCC
GATGTCATAGTGGGGCGTCGAACCAAAAACAGCCGAATTCCACTATTGTG
GTACACCGCGCGCATGTCGGAGAGTACGCAACGTTTCTGGAGAATTTTTG
AGTAGAGAGATGACCGGGCTCAGCCAGCTGCATTGCTTGGTATTCATCCT
GAAATCAAGTTGTACAATCGCATCGTCGCTTTGATAAGAAGATGCGGTCG
ACGCCCAGACTTCCATGGCAAATCTCTGTTACCGTTAACGTTCAAACAAC
TTTCAGAAAACCGACACTCGAGCGAGGCTCTCAAGACGGAGGGCTCTCCT
TCAGTGTTGAGGACACGGTCGACGAAGGAGTCGATATACCAGCAGGCCCA
ACCTTGATCATGAGGCGCATTTCGGAAGGGCAGGAAATCCGGAAGGTGAG
GTGGTTGCGCCTGGATATGAAGGGCTTTTGTTTCGTCGAATGACCACGTA
TTCGCTAGTGTAGGAATGACTGTCACTTGAAGTTCGCCTCGACGTTGCCG
GTTACGTTGTCGGTTGCATCCTCTCTACCCGACCTTGGCGTTGTCGTCGT
TCGGAAAGGTGATTATTCGGAGATCCCAGGATGATTCCCTTGAGGCTGCG
TTCGTGCGTGGACGAACATGTCAAGTTGATGTGTTCGCACTTCCTTGATC
CACCTGGCTGCTTCAAACACGCTTGGCGTTGATGTCGCTCGTATCGTGGA
TATTATTCGCCCCCCTCCAACGGATACGAGCGCAGAGTGCTTTCCCTTCC
TTTGACGAAGGCATTCTGCGCATTGATTACGCCACTGCCATACTCGCGGT
GTTCGTTTGCTGTGCATGATAAGCCATATCAGGTCAGGGTCCGTGTTATG
GGGGTAGCGCTTAACCCTAACCATAACCCTGAGTATTTTTTCCCTTGACC
TCTCCCGGTCTTCCGGGGCTCGTCACGCAATGCAAGGGTAAGGTCGATCA
GCAACCCCTCCGCGAGACTGTTGCACGTGAGCACTGCACTGGTTCTTGCT
AACCTTCTTCTGCAATATATACTCACGGTCAACGCAGGTGTTCGCGGAAC
GAATTGTGGTGAAGGCGGTCGTGAGGTCGCTTGTCGAGGGCGGTGCCCCT
CCGGGACTTAAAGTACGCACGGTGCTGCATGAGGGATTAATCCAGACATG
AACTGCCACTTTCTTGTTGCCCCCTGCGCCGAATGGTTCTCGGTCGCCAT
ACGTTCGGAGGGGCATGTGGGTGTCGAGGGCCCAGACCCCGTAATTGTTC
TCTGCCAAGTGTCGCGTTTCGAAAGCATTCTTGGGGTCGCGGCGGGGGCT
CGCCCTGTGTGTGTTTTTGTTCTTATCCAGTGAGGGCTACTAGACTATGC
GTTGTGTCGTGAGCGTCGTTTCTCTTGATGTTGAGAATTCGGATTCTCCG
CCTGCACCCAATGCGTCTTAACATATTTGGCATGGTTTTTAACGCGTGAG
GCCGGAGATACAGCGTGACCGGGGTGTCAAGAACGTTCTTTCTTTTTTTC
GCTCTTGCTTTCAATGGCTGGCACCCCCCGCGATCGTGTTGCTCTTCGTT
TCGCCTGGCTTATCTCCGCCTGGTTTAGGGCCTTCGATGTTGAAGGATTC
CCCAAAAGTAGCACCAGCGCGAGACGCGTGTCATCGTTTGTTGCGGTACT
TCACTCGAAAAAGTCACCTTGTTTACATGTTAGCAGGCGGTGTTTCGGCA
ACATCTTCGGAGACCAATGACGCCCTCCAGGACAGAATTGAAAGCGATAA
GTGTCTCAGACTAGACTTCCTTGTTCGCGAGAAGGACTTAATCCTCTTTG
ACACTAGGGGCTCTCCTGCTGGGATGGGCTTTCCAACCAACAGCAATGCG
CCATGAGGTCACGACCCGACCCCGGAATGAGCCAGTTGTCCAAACGTCGG
ACCCGCACGCAGCGTGCCTGCACCCCGGACCCAGCTGCAGTCCGACAAGA
TACCACCCTTTTCCGGCGCGATAGGA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig10:39406..44631- >mRNA_P-fluviatile_contig10.611.1 ID=mRNA_P-fluviatile_contig10.611.1|Name=mRNA_P-fluviatile_contig10.611.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1176bp|location=Sequence derived from alignment at P-fluviatile_contig10:39406..44631- (Porterinema fluviatile SAG_2381) ATGTTCAGACAATCGGTGAAAGTGGTGGCAGCTCTCGTGGCTCTTTTGTG TCCTACAGTGAGGGCGTTCCGCTCAGCAGCAAATATTCAGCTGAAGGCCT CCCAAGGAAGCGGGAATCCAAGTTGGACGAAGCCACGGCGTGACCGATCC ACACGCTATCACATGGGAGTCAAAGAGGAGATCTTGAGACCTACGTTGTT AAGGGTGGACTTCGAACGTGCAAAGTTCGAGGAGTTGCGAGAATGGATCC AAAGATGTTCAGACAATCGGTGAAAGTGGTGGCAGCTCTCGTGGCTCTTT TGTGTCCTACAGTGAGGGCGTTCCGCTCAGCAGCAAATATTCAGCTGAAG GCCTCCCAAGGAAGCGGGAATCCAAGTTGGACGAAGCCACGGCGTGACCG ATCCACACGCTATCACATGGGAGTCAAAGAGGAGATCTTGAGACCTACGT TGTTAAGGGTGGACTTCGAACGTGCAAAGTTCGAGGAGTTGCGAGAATGG ATCCAAAGGTACCCATTTGGAACGGCCTTACCAGTTCAGCCGTTCTCGCT GATGGAGACAGAGACGGGCGTCGATGTCGTGTTCAGAAAGTACCCATTTG GAACGGCCTTACCAGTTCAGCCGTTCTCGCTGATGGAGACAGAGACGGGC GTCGATGTCGTGTTCAGAAAAAAACCGACACTCGAGCGAGGCTCTCAAGA CGGAGGGCTCTCCTTCAGTGTTGAGGACACGGTCGACGAAGGAGTCGATA TACCAGCAGGCCCAACCTTGATCATGAGGCGCATTTCGGAAGGGCAGGAA ATCCGGAAGAAAACCGACACTCGAGCGAGGCTCTCAAGACGGAGGGCTCT CCTTCAGTGTTGAGGACACGGTCGACGAAGGAGTCGATATACCAGCAGGC CCAACCTTGATCATGAGGCGCATTTCGGAAGGGCAGGAAATCCGGAAGGT GTTCGCGGAACGAATTGTGGTGAAGGCGGTCGTGAGGTCGCTTGTCGAGG GCGGTGCCCCTCCGGGACTTAAAGTACGCACGGTGCTGCATGAGGGATTA ATCCAGACATGAGTGTTCGCGGAACGAATTGTGGTGAAGGCGGTCGTGAG GTCGCTTGTCGAGGGCGGTGCCCCTCCGGGACTTAAAGTACGCACGGTGC TGCATGAGGGATTAATCCAGACATGA back to top
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