mRNA_P-fluviatile_contig1.92.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.92.1
Unique NamemRNA_P-fluviatile_contig1.92.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: D8LE10_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE10_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.050e-52
Identity = 165/298 (55.37%), Postives = 182/298 (61.07%), Query Frame = 3 
Query:   18 MRSNSFLLSAVLLVGSVIEVLGVYSFICSRGVRPFNLYPPSRSLRQRRWRDRGSSPVSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXN---------SDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFKAQKAMMQQQGGDAD-DGVADVDDLDDD 881
            MR +SFL+SA LL+GS ++VLG                              G+ PVSVKVTLRGKKYDV+DATSV+DVQKSVEEQAGLAKEQQSVLFKG+LL PEL+LEEAG++DGDTVNIVPSKKPK + +A E                    GVG            XXXXXXXXX    XXXXXXXXXXXXXXXXXX          SDMMEEVLGNPEKMEQARQAILDNPTLKQAM+QLPGF+DMIDS                               DG ADVDDLDD+
Sbjct:    1 MRPSSFLISAALLIGSAVDVLG------------------------------GAGPVSVKVTLRGKKYDVQDATSVEDVQKSVEEQAGLAKEQQSVLFKGSLLKPELELEEAGVSDGDTVNIVPSKKPKTSVAAVEA-------------------GVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMMEEVLGNPEKMEQARQAILDNPTLKQAMTQLPGFADMIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAADVDDLDDE 249
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A836CH29_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH29_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.520e-41
Identity = 116/235 (49.36%), Postives = 151/235 (64.26%), Query Frame = 3 
Query:  177 SSPVSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFKAQKAMMQQQGGDADDGVADVDDLDDD 881
            S+P++V VTLRGKKY V   +SV D+Q  V+E+AGL+ EQQSVLFKG LL    DL   G++DGDT+N+VPSKKPKA  +AA    A           +G  +  GG    F G +  XXXXXXXXX P G                  NS MM+E  G+PEK+E++R+AIL+NP LKQAM+QLPGFS+M++ P+KW ++M  A EM + Q++M+Q QGG    G  DVDDLDD+
Sbjct:   22 SAPLNVVVTLRGKKYQV-SGSSVSDIQAEVQEKAGLSAEQQSVLFKGKLLAAGDDLSTVGVSDGDTINVVPSKKPKAERTAAAGVDA-----------DGTVDAPGGEGSGFPG-IAXXXXXXXXXXXPAGMPDLSPEEYQKMMGEVL-NSPMMDEFFGSPEKIEESRKAILENPMLKQAMAQLPGFSEMLEDPDKWMESMLQAKEMLEQQRSMLQDQGGAPLGG--DVDDLDDE 240
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: B7G5I5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I5_PHATC)

HSP 1 Score: 100 bits (249), Expect = 6.550e-20
Identity = 78/217 (35.94%), Postives = 108/217 (49.77%), Query Frame = 3 
Query:  159 RWRDRGSSPV-SVKVTLRGKKYDVKDATSVQDVQKSVEEQAG-LAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFK 803
            RW    S+PV +V+VTLRGKKYDV D  +VQD+Q  +EE +G LA +Q  VLF G  L     L + G+ADG  +NIVPS K  AA    + A    +  D     E      G         L G         M G                   NS + +E + +P K+E++RQ IL+NP LK  M+ +PG  D+++ PE WR+ M+ A  ++K
Sbjct:   16 RWLAAASAPVPNVQVTLRGKKYDVTDVRTVQDLQDRIEEVSGILAPQQGRVLFDGKRLESTDVLADVGVADGAQLNIVPSSK--AAGKVKKTATTTESKTDSAAMMEDYLRQAG---------LDGDKLDELMKGMSGSDGKVPSMEESLGMMNEMMNSPIFQEYMSDPAKLEESRQMILNNPMLKSMMAGMPGMEDILNDPEAWREAMQAAASLYK 221
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BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A7S2WG81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG81_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.300e-17
Identity = 75/217 (34.56%), Postives = 115/217 (53.00%), Query Frame = 3 
Query:  186 VSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKA---FAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLG----------------NPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNM 779
            ++V  TLRGKK+DV  A++VQ++++++E +AG+ +++QSVLFKG  L+ +  LE+AG+++GDT+N+VP K PKAA+  +E +         GDEEE   GAG  +G G D    A+ G         +  G                    D + E +G                +PE +E++RQ IL NP L QA   L G  ++I +PE +R  M
Sbjct:   29 LNVVCTLRGKKFDVA-ASNVQEIREALEAKAGIEQDRQSVLFKGKKLDADQILEDAGVSEGDTINVVPLKAPKAASRPSETSGLGIDDEDDGDEEEGGLGAGTSLGAGMDKMKEAMSGMDMDAMMESL--GGKEGMDKMMKQFGLDGDMTPDKINEAMGQMQQMFQNPALKQFFEDPEMLEKSRQQILGNPMLMQAYESL-GMGELIRNPEVFRNQM 241
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A7S2N0G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0G5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.180e-16
Identity = 74/231 (32.03%), Postives = 107/231 (46.32%), Query Frame = 3 
Query:  174 GSSPVSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAF--------AVSAGGD---EEEAEEGAGEGVGGGSDPFGGAL-----GGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMM-----EEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFK 803
            GS P +VKVTLRGK+Y + + ++V+++QK VEEQAGL   +Q VLF G  L P   LE+ G+ DG  +NIVP+                      +V   GD   E            GG +     L                MPGG                    +MM     +E + +PEK+EQ+RQ IL NP +K  M+ +PGF ++++   KWR+ M  A +M++
Sbjct:   28 GSKPFNVKVTLRGKRYTIPNVSTVRELQKGVEEQAGLTPAKQGVLFGGKKLKPSDVLEDMGVEDGSLINIVPTSSXXXXXXXXXXXXXXXXXXXXSVGVNGDVSAETSXXXXXXXXXXGGGNFMADMLKESGIDSDQLDELMKMMPGGGAGGEEGGMPSMQESMKMMQEMMSSPLFQEYMKDPEKLEQSRQMILQNPLMKSMMAGMPGFDEILNDEVKWRETMIAAADMYQ 258
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A7S2Y1L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1L4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.500e-16
Identity = 87/233 (37.34%), Postives = 119/233 (51.07%), Query Frame = 3 
Query:  186 VSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSV-LFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFKAQKAMMQQQGGDADDGVADVDDLDDD 881
            + V VTL+G++Y V  AT+V D++  +E+QA L   Q  V LFKG +L+PE DLE  G+  GD +N+VPS+KP+ AAS +    A                               XXXXXXXXX                      +S M+ E   +PEK+E ARQ I DNP L+++MS +PG S++ID P+KWR+ M  A    K Q  M++ Q         DVDDL +D
Sbjct:   23 LDVFVTLKGQRYSV-TATAVGDIKDELEKQAALDPSQDFVVLFKGKVLSPEDDLEAEGVKSGDIINMVPSRKPRPAASPSSVGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEKMTGMNKEQFDQAMEQMYSSPMLNEFFSDPEKLEMARQQIADNPMLRESMSSMPGMSEIIDDPQKWREAMTAA----KEQMDMLRSQA------PKDVDDLPED 244
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A7S1UXN8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UXN8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.050e-13
Identity = 69/225 (30.67%), Postives = 105/225 (46.67%), Query Frame = 3 
Query:  192 VKVTLRGKKYDVKD-ATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGG---SDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFK------AQKAMMQQQGG 836
            + VTLRGKKY ++D   +V ++++ + E A  A  +  +LF G  LN E  L + G+ DG ++N+VP   PK  +S         A G              GG   S P     G          M                     ++ M +E + +PEK+EQARQ +L NP LK  + Q+PG  D+++ P+ WR+ M+ A+ M++       +KAMM Q GG
Sbjct:   14 LSVTLRGKKYSIEDDVATVAEIEEKMVELADGAMGR--LLFGGKRLNSEDVLSDVGVTDGSSLNMVPGASPKKKSSXXXXXXXXXASGS-------------GGVLPSSPSDNPFGAVPPENMDEVM----KSMGNVEESLSQMTQMMSNPMFKEFMTDPEKLEQARQMMLQNPMLKGMLGQVPGMEDVVNDPDAWRETMQAAMTMYQNMDPEDVKKAMMGQFGG 219
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A448YZF6_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZF6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.080e-11
Identity = 77/225 (34.22%), Postives = 120/225 (53.33%), Query Frame = 3 
Query:  180 SPVS-VKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQS-VLFKGNLLNPELD-LEEAGIADGDTVNIVPSKK-------------PKAAASAAEKAFAVSAGGDEEEAEEGAGEGVGGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXXNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFKA 806
            +PVS V VTL+GKKY + D T++ ++Q+ +EE +G+   +Q  +L  G  L+   D L EAG+ +GD +N VP+KK             P ++AS +E   A S   D  +  EG+   +GGG+    G L         XX    XXXXXXX           +S M  E + +P K+E++RQ IL+NP +K  M+ +PG S++++  + W + M  A  + K+
Sbjct:   28 TPVSNVHVTLKGKKYQIDDVTTLAELQERLEEHSGIPPSKQGKILHNGKRLSESDDGLSEAGVQEGDQLNCVPAKKSSXXXXXXXXXXXPDSSASPSEGGSADSLA-DMMKGLEGS---MGGGA----GGLDDMMSKLMSXXXXXXXXXXXXXAESMKMMKELTDSPMFAEYMNDPAKLEESRQMILNNPMMKAMMASMPGMSEILEDKDAWAQTMMAAAGIMKS 244
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: W7T2R4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2R4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.260e-10
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3 
Query:  177 SSPVSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIVPSK 395
            ++PV+V VTLRGKKYD+  A SVQD+Q  +E ++GL   QQ++LFKG  L     L  AG+ +GDT+NIVP+K
Sbjct:   29 AAPVNVVVTLRGKKYDL-SAESVQDIQAQMEGKSGLKPGQQAILFKGKQLGASESLSAAGVVEGDTLNIVPTK 100
[Close]
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Match: A0A2V3IQY5_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQY5_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 2.580e-8
Identity = 65/249 (26.10%), Postives = 110/249 (44.18%), Query Frame = 3 
Query:  186 VSVKVT-LRGKKYDV---KDATSVQDVQKSVEEQAGLAKEQQSVLFKGNLLNPELDLEEAGIADGDTVNIV---------------PSKKPKAAASAAEKAFAVSAGGDEEEAEEGAGEGV-------GGGSDPFGGALGGXXXXXXXXXMPGGXXXXXXXXXXXXXXXXXX-----------------NSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKWRKNMEMALEMFK 803
            +++K     G+ YD+     A +V D+Q S+   +G+  ++Q++LFKG +L P   + +  +ADG T+++V               P+ KP AA  ++          D    +  + E +        G + P GG   G         + GG            XXXX                   N+ M+++ L +PEK EQ+R AIL+NP +K+ +   P F  ++  P KWR +M+ A ++FK
Sbjct:    3 ITIKAKCFNGQSYDLTFDSAAPTVNDLQSSISSASGITPDRQTILFKGQVLEPGSTISDYSLADGHTISVVRRIGKSAPKSSTKPPPASKPLAAPPSSATXXXXDXXADPSAPQPPSLEDMMRSLNMGAGAAPPLGGGAAGVPPMPDLSALLGGADPSTLGAAGGAXXXXAGGLEQLFAQLPQMMNGFFNTPMLQDYLNDPEKQEQSRDAILNNPYMKKLLESDPEFKKVVSDPSKWRDSMDAAKKLFK 251
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LE10_ECTSI1.050e-5255.37Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A836CH29_9STRA1.520e-4149.36Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
B7G5I5_PHATC6.550e-2035.94Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S2WG81_9STRA1.300e-1734.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2N0G5_9STRA1.180e-1632.03Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2Y1L4_9STRA1.500e-1637.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UXN8_9STRA2.050e-1330.67Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448YZF6_9STRA4.080e-1134.22Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
W7T2R4_9STRA1.260e-1053.42Ubiquitin-like domain-containing protein n=2 Tax=M... [more]
A0A2V3IQY5_9FLOR2.580e-826.10Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1300107..1305686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.1
Seed ortholog evalue2.9e-45
Seed eggNOG ortholog2880.D8LE10
KEGG koko:K04523
KEGG Pathwayko04141,map04141
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Hectar predicted targeting categorysignal peptide
Exons7
Model size1911
Cds size867
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815284.9510467-UTR-P-fluviatile_contig1:1300106..13001231622815284.9510467-UTR-P-fluviatile_contig1:1300106..1300123Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1300107..1300123 +
1693561386.494847-UTR-P-fluviatile_contig1:1300106..13001231693561386.494847-UTR-P-fluviatile_contig1:1300106..1300123Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1300107..1300123 +
1622815285.05371-UTR-P-fluviatile_contig1:1304659..13056861622815285.05371-UTR-P-fluviatile_contig1:1304659..1305686Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1304660..1305686 +
1693561386.5898976-UTR-P-fluviatile_contig1:1304659..13056861693561386.5898976-UTR-P-fluviatile_contig1:1304659..1305686Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1304660..1305686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815284.9634864-CDS-P-fluviatile_contig1:1300123..13001891622815284.9634864-CDS-P-fluviatile_contig1:1300123..1300189Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1300124..1300189 +
1693561386.5047622-CDS-P-fluviatile_contig1:1300123..13001891693561386.5047622-CDS-P-fluviatile_contig1:1300123..1300189Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1300124..1300189 +
1622815284.9786463-CDS-P-fluviatile_contig1:1300617..13007071622815284.9786463-CDS-P-fluviatile_contig1:1300617..1300707Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1300618..1300707 +
1693561386.5123024-CDS-P-fluviatile_contig1:1300617..13007071693561386.5123024-CDS-P-fluviatile_contig1:1300617..1300707Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1300618..1300707 +
1622815284.991383-CDS-P-fluviatile_contig1:1301436..13015621622815284.991383-CDS-P-fluviatile_contig1:1301436..1301562Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1301437..1301562 +
1693561386.519511-CDS-P-fluviatile_contig1:1301436..13015621693561386.519511-CDS-P-fluviatile_contig1:1301436..1301562Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1301437..1301562 +
1622815285.0020676-CDS-P-fluviatile_contig1:1302590..13027101622815285.0020676-CDS-P-fluviatile_contig1:1302590..1302710Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1302591..1302710 +
1693561386.5268402-CDS-P-fluviatile_contig1:1302590..13027101693561386.5268402-CDS-P-fluviatile_contig1:1302590..1302710Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1302591..1302710 +
1622815285.0133667-CDS-P-fluviatile_contig1:1303235..13034301622815285.0133667-CDS-P-fluviatile_contig1:1303235..1303430Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1303236..1303430 +
1693561386.5652153-CDS-P-fluviatile_contig1:1303235..13034301693561386.5652153-CDS-P-fluviatile_contig1:1303235..1303430Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1303236..1303430 +
1622815285.025837-CDS-P-fluviatile_contig1:1304112..13042441622815285.025837-CDS-P-fluviatile_contig1:1304112..1304244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1304113..1304244 +
1693561386.5751429-CDS-P-fluviatile_contig1:1304112..13042441693561386.5751429-CDS-P-fluviatile_contig1:1304112..1304244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1304113..1304244 +
1622815285.0387797-CDS-P-fluviatile_contig1:1304521..13046591622815285.0387797-CDS-P-fluviatile_contig1:1304521..1304659Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1304522..1304659 +
1693561386.5823774-CDS-P-fluviatile_contig1:1304521..13046591693561386.5823774-CDS-P-fluviatile_contig1:1304521..1304659Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1304522..1304659 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.92.1prot_P-fluviatile_contig1.92.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 1300124..1304659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.92.1

>prot_P-fluviatile_contig1.92.1 ID=prot_P-fluviatile_contig1.92.1|Name=mRNA_P-fluviatile_contig1.92.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=289bp
MRSNSFLLSAVLLVGSVIEVLGVYSFICSRGVRPFNLYPPSRSLRQRRWR
DRGSSPVSVKVTLRGKKYDVKDATSVQDVQKSVEEQAGLAKEQQSVLFKG
NLLNPELDLEEAGIADGDTVNIVPSKKPKAAASAAEKAFAVSAGGDEEEA
EEGAGEGVGGGSDPFGGALGGLGGLGGLSGMPGGMPPGVTPEMYQKMMKE
MMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFSDMIDSPEKW
RKNMEMALEMFKAQKAMMQQQGGDADDGVADVDDLDDD*
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mRNA from alignment at P-fluviatile_contig1:1300107..1305686+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.92.1 ID=mRNA_P-fluviatile_contig1.92.1|Name=mRNA_P-fluviatile_contig1.92.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5580bp|location=Sequence derived from alignment at P-fluviatile_contig1:1300107..1305686+ (Porterinema fluviatile SAG_2381)
TTTAAAGAAGCACAACCATGCGTTCCAACAGCTTCCTTCTCTCGGCGGTG
CTTCTCGTCGGAAGTGTGATCGAAGTGCTTGGGGTGAGTCCGTGTAAGCA
CGCCAAGAAATCACTGCGCCGCTGTTGTGTCGACAAGAGAGAAATGAACA
GGAGCGGTTCATAATGCACGAGAGAGACGCCATGTATTTTAAGGGCGCCC
CAAAGCTTTCAGGCGACGTTGGTCCCAGTGGGAGACTGCGGGGTTGGTAT
GGGTACCTAAAGCTTGGATTCCGTGCTGGTATCGATAGAGTTTTTTACGC
TGTCCTCGGTGCATATAGCATGTGCGGTGTGCGTGTCGTGGAGACACGTG
TTAGAAGGTCAAAGTAGGATTTTGTATCGAACTTGCGGCAACGACGTTTG
GGGAGAGAGACTACCGTGCTGATAGCGTCTAATACAGGCACAGCCCCATG
ATATAGCCCTCGAGATTTCAGCGATTGGGTAGAGCTCTGTGTGCCGTAAC
ATCTTCCTTAGGTGTACAGCTTCATCTGCAGCCGCGGTGTTCGCCCGTTC
AACCTGTACCCACCCTCGCGGTCGCTTCGGCAGCGGCGGTGGCGTGATCG
GGTGAAGCCAGGCGCAGCACACATCATGCGGCCGGCGTTCGTTTCTTTTT
TTCTTGCTGAGAATTGCTTTGCTGATTCTGCCGGGTCGCGGAATGGTTGA
TCGTTATCGTTCAACTGAAAGCACACGGGAAGGCCTGCGCATCACTCCAT
CATAACCTCCCGATGAGCGGCTACTTGCGGTACTGGAAGGGTTTTGAGCA
GAACAGCAGTAGATAGTCGTCCGCAGACGAAGAAAAGAGGGTGATCACTG
AGTTGAGCCTTTGTAGTCATGCTGATCACTCAATATCTGTTCCGCCATCT
TTCTCAGCCTCAATCCAAAAGACCAACACGATTTCGAAAAAACTGTCGGT
CTCGTGAGAGCAGAGATGTCGCACAGAAGGCTTTTGAGTTCGCTCGCTTG
CTTTTGCTCTGAAAGTGCCACAATCCAGTAAGCCCCCCGCATCAAGTTAA
TCGAAAAAAATGCAGGCCCGTCCAAGAGAGCGGAGCATGTTCTGGTTTGC
GAACAAGGACTAGCCCGTTGTTGTGGTGTCCTCAATCAGGCTGTGTAAAA
TCGCTCACGAGTTCTCCTCTCCCGCACCGAGTGCTCAATCGGTCCAGCGA
AGTGAACTTGACTTCAATCGTACGATTCTTTGACGCGGGTCCCCTTGAAA
TTGGCTCTCTATTACCCCCTTGCCCCAATTGTTCGGATTTGCCGCCTGAC
CAATGAACGCCGCACGGTGTTTATCATCAGGGGAGCAGTCCGGTGAGCGT
GAAGGTAACCCTCCGTGGCAAGAAGTACGATGTCAAGGACGCCACCAGCG
TACAGGATGTACAGAAGTCCGTGGAGGAGCAAGCTGGTCTTGCCAAGGAG
CAGCAGGTGACCAAAGGCGTGGGGGGAGGTGTACGCATAGTCGTGCATGC
CGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGC
ACGCCGGTTTCACCGGACCACGCTCTCACATCACCAAGCGCGAAGCGCCG
TGAGGTATTCGGCGAGTCGCATGAAGGGTACGCTGCATCCTGCTAAGGGT
GTTCGGCATCTTGTGCTTACTTCCTTGCATACGGATGACAGCTGCGCATG
GCTTAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACT
GTGTAACTGCCTCGAGGGTGCTTGACCATTTAACACTACGTGGTGCGATC
ATCCCCCTTGCGCGGAGTGAGGGTTCTCCACCCCGCACAACATGATCTAC
TCGACCACCATTATGGTCACCGCCAAAAAAAAACAGAGGTAAACAAAAAA
GACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTGTTACAA
CGTTGCCAAGCGACGAAATCCCAATCCCGATGGCAAACACCGAGGTGAGA
GCCAGCGGGAGAGGGGGGGAAGGCGTGGGTGGAGGGCTTTTTCGGCCGTT
GTGTTGTGCTGTTGTGCAGCCTTCGCGTATGAAACTTTACCAAGCCGGCA
ACAGCAAGTGTAATCGGCATGCGCGCGCTTATCGATCTGATTGGTTGATG
CCATCCGGAAGATGTGACGCTGCGTCACAACCAAAAGTCGCACGTTTGCG
CTTCTTTGTCTCGCCTTCCATTACAAGCAGAGGGGCTGGTAAGTATCCTG
CAAAGCATTGGACAAAGGACGCAAACGACATGCTCGTACCATGCAAGCGC
CACGACTTCTCGCTTCGCACGTCGTGTGCGGCTGCCCCGGGGGGCGCCAT
ATTACACGTCAACCGGGGAACAGACGCGGTTCTGGCTTCGGAAGCAAGGG
GGGGCTTCCTAGACGCTTCGCCCTGATTTTCGTCGTCGGCTTGACGTTTC
CGTACGTCCTCGGGTCCCGTCTTTGCGTATGCAGTCCGTCTTGTTCAAGG
GGAACCTGCTGAACCCGGAGCTGGATTTGGAAGAGGCAGGTATCGCCGAC
GGGGACACCGTCAACATCGTCCCAAGCAAGAAACCCAAGGCGGCCGCCTC
TGCGGTAAGTCGACACCGACGAGAGGGATGTGGACCAGTGTCTCACCCCC
CTTTGACTACATGAACCTCTGAAGCTTACGCTTCTGACACCGACGTGTCT
GTTTGAATGGTGCACCGCCCTTCGCCAATGTGCACTATGTAGTAATCTCA
TGGTCGAAGCGTCGCCGGCTCGGCAGGCGTCTTAACCACATCGAACCTTG
GCAGGGGATAAGATGGCGTTTCAAGGCCGCATGAGTGTCGGGCGGCCTTT
TTTGTGCTGGCGCTGCTCGCTTTTCCTACTCTCTTCTGTGCTGATACCTG
TTCGATCACTCGACGCTTTGCCCGTGCCCCAGCATGATCTTGGTCGTTTT
TTTCACGCCTCCCACTGTTTGTGAATAGCGGACGCGCTCACACATTTATC
GTCCCTCTCCGCCCGCCGTGTGAGTGCCAGCTAGGACGCAATTTTTCTCA
AGGATTCTTGAGTTTTTCAACGTTTTGCTGAAGGCTTTTATCTTTTGCTG
ACCGGTGTTGTTGTGACGATGTTCCGCAGGCCGAAAAGGCATTTGCCGTT
AGTGCAGGCGGCGACGAGGAAGAGGCTGAGGAGGGGGCCGGGGAAGGTGT
TGGCGGCGGCAGCGACCCGTTCGGCGGCGCTCTTGGAGGCCTCGGCGGGT
TGGGGGGGTTGAGCGGGATGCCTGGGGGCATGCCTCCGGGCGTTACACCA
GAGATGTACCAAAAGATGATGAAGGTGACGATTTTTCGTGTTCTTGTCGG
GGAGCGGCGCAATCCGGCGCACTTTATCGTGACTGGTGAGAGGATGTTTG
TGTCGGTGGCCACGTCACGCGCAAGGAAGGAAGTACGTTCGGAACCGACA
CGAATGCGGCTCCGCGGATTTGTACACGGAGCACTCCGTGCAACCGCGGT
GATAGTGTTGCTGCCGCTCGCTGCTATATCTCCCCGTGTTCTTTGCGCTC
CTCCTCAATCCTTTTTTCCGAATCCGTCGTCCACTCTCCATTACGTATGT
CGGGGCTGCGTTTCCGCTGGCCTTTACGCTCACTCACGGGTTCATTCTAG
TTTGCAATGGAACCAGGGCATGCGAGTCTTCGCTCGCCCGTGTGTGCGTC
TTTGTGCGTGTGCGAGAGAGGAGAAATAGAGGCAGAATCGAAAGCCTCAA
TCGACTGCGCTATACCTCACCAATTTGCGAGCAATGAAACGAGGAGCTAT
TGTGACCGATGATACGCAACTTGCGGTGTGGCTGGGAGAGAGTGCAGTCA
CAAAAACGGCGTTGTCTTTCCTTTTGTTGGGATCAGTACAGGTAGTAGAC
TGCTGTTTGGAGAAGTGCTTGTACCAACCAGCGTTTATACATGAACGAGA
TGGTCCTGCTCTCCCTTTTCCCAGCGACCCTTTTTATTCTGCTCACAACC
CGTTAGGAGATGATGAACTCCGACATGATGGAGGAAGTGCTGGGAAACCC
AGAGAAGATGGAACAGGCAAGGCAGGCCATCCTTGACAACCCGACCCTCA
AACAGGCCATGTCCCAATTGCCCGGCTTCTCTGATATGGTGAGCGAAGAC
ACAAAGCGAGAGAGATATAAAATATAGAGAGCGAGAGTAGAGAGAGGGAG
CGAAATAGGGAGAGAAAGAGAGAGAAGGAACAAAGGTAAACCCAGGAAAA
GGAGGGTAGAAGGAGGCAAGAGGGGCTCCGCTAGGCAAGTGCGATGTATG
TCGATCTATGTGAATGTGAGAGGGAAGATCTTGACTAGTTCCGAAGGAGC
GTCCCAATTTCGCTACCATACATCAGCGCGTACACACGACGTCGCCTTGC
TGAACGTGCGCTCAGATTGACTCTCCCGAGAAGTGGCGGAAAAACATGGA
GATGGCGCTGGAGATGTTCAAGGCACAGAAGGCAATGATGCAGCAGCAGG
GAGGTGACGCGGACGACGGTGTAGCCGACGTTGACGACCTGGACGACGAT
TAAATCAAATAAATCTCGCCGTTTTATGTGGGTCATTCGGGCGGATACAG
AGCAGAGCAGACTCTAAGCCACGTTTTCTCTTGTCTTTCCCTGCCAGGGT
GATGAGGATGTTATTGTCGACGGGCGCTCAGACTGATCGCTCAGAGTGTG
GGTCGACAACGTATAGTAGAATAGAAGTCCACTGTTGTGATGAGAGATCT
GAAGCGGATTTGAGGGGGGGGAGGTACCCTCTTGTGTCCCGCTGCGCTGC
TGCTTGTGGTCAACTCGGCTTAGGGTTAAGCAATGTGGTCAAGATGTTGG
CATGTTTTTCTCTTTCCTTGAAGTGCCGACAAAGCCATTACGCGCCCGCG
AGGAAGACAAACTGCAAGCGAGACACTAGCGAGGCTTGGCGATGCAGACC
ACTTTGTTACAATCGCACAATATGGTCGGGGAAAAGCAATGACCCATTCA
GTCAAGAAGCCTCCTGATTTGGCATGGTCGTCCGGGAGGGTGGTGCAGGA
TTCGGGCGGGGCAGGACAAGAACGTGCGTCCGAAGTGTGGCGCCGTCTGT
GCAATCGCAGCATCGTTGAGATCTTGCACTGGATTTTGCAGATTTTTTGT
ATTTTACTTGTGCCGCAAGATGACGTCCCTTTCGTACGTGAATGTGTGCG
GGCCCCACGCGCTGCGTACCGCCGTTTTTAGTGTCTCTGTATGTGTTCTG
TCCTCCGTTTTTCGCTAGTTTTGGCATAGCTGCAGGTCCTGGGCTCGCGA
GGGGATCTCCTGCCGTCACAACAGAGCGAGCGAGCATTTCTAAAAAAACG
GGACGGTGGGACTCACTTGAAGTAGACTGACCAGCTTTTGGCGCTTGTCG
TGTGGTCTTGTTGGACGTGTTGCCCCAGTTAAAGCCACCAGGACGAAGGG
CGAGGTCGCAACACACATTGACCAAGAAGACAGGAGACACACCATAATAA
ATGAAAAAGTCACGTCCGTGAATAAAAGACAAAAGTTCATATATGTTACT
CCATCGTTAAACGTCTGGCGAAATACTGTT
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:1300107..1305686+

>mRNA_P-fluviatile_contig1.92.1 ID=mRNA_P-fluviatile_contig1.92.1|Name=mRNA_P-fluviatile_contig1.92.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1734bp|location=Sequence derived from alignment at P-fluviatile_contig1:1300107..1305686+ (Porterinema fluviatile SAG_2381)
ATGCGTTCCAACAGCTTCCTTCTCTCGGCGGTGCTTCTCGTCGGAAGTGT
GATCGAAGTGCTTGGGATGCGTTCCAACAGCTTCCTTCTCTCGGCGGTGC
TTCTCGTCGGAAGTGTGATCGAAGTGCTTGGGGTGTACAGCTTCATCTGC
AGCCGCGGTGTTCGCCCGTTCAACCTGTACCCACCCTCGCGGTCGCTTCG
GCAGCGGCGGTGGCGTGATCGGGTGTACAGCTTCATCTGCAGCCGCGGTG
TTCGCCCGTTCAACCTGTACCCACCCTCGCGGTCGCTTCGGCAGCGGCGG
TGGCGTGATCGGGGGAGCAGTCCGGTGAGCGTGAAGGTAACCCTCCGTGG
CAAGAAGTACGATGTCAAGGACGCCACCAGCGTACAGGATGTACAGAAGT
CCGTGGAGGAGCAAGCTGGTCTTGCCAAGGAGCAGCAGGGGAGCAGTCCG
GTGAGCGTGAAGGTAACCCTCCGTGGCAAGAAGTACGATGTCAAGGACGC
CACCAGCGTACAGGATGTACAGAAGTCCGTGGAGGAGCAAGCTGGTCTTG
CCAAGGAGCAGCAGTCCGTCTTGTTCAAGGGGAACCTGCTGAACCCGGAG
CTGGATTTGGAAGAGGCAGGTATCGCCGACGGGGACACCGTCAACATCGT
CCCAAGCAAGAAACCCAAGGCGGCCGCCTCTGCGTCCGTCTTGTTCAAGG
GGAACCTGCTGAACCCGGAGCTGGATTTGGAAGAGGCAGGTATCGCCGAC
GGGGACACCGTCAACATCGTCCCAAGCAAGAAACCCAAGGCGGCCGCCTC
TGCGGCCGAAAAGGCATTTGCCGTTAGTGCAGGCGGCGACGAGGAAGAGG
CTGAGGAGGGGGCCGGGGAAGGTGTTGGCGGCGGCAGCGACCCGTTCGGC
GGCGCTCTTGGAGGCCTCGGCGGGTTGGGGGGGTTGAGCGGGATGCCTGG
GGGCATGCCTCCGGGCGTTACACCAGAGATGTACCAAAAGATGATGAAGG
CCGAAAAGGCATTTGCCGTTAGTGCAGGCGGCGACGAGGAAGAGGCTGAG
GAGGGGGCCGGGGAAGGTGTTGGCGGCGGCAGCGACCCGTTCGGCGGCGC
TCTTGGAGGCCTCGGCGGGTTGGGGGGGTTGAGCGGGATGCCTGGGGGCA
TGCCTCCGGGCGTTACACCAGAGATGTACCAAAAGATGATGAAGGAGATG
ATGAACTCCGACATGATGGAGGAAGTGCTGGGAAACCCAGAGAAGATGGA
ACAGGCAAGGCAGGCCATCCTTGACAACCCGACCCTCAAACAGGCCATGT
CCCAATTGCCCGGCTTCTCTGATATGGAGATGATGAACTCCGACATGATG
GAGGAAGTGCTGGGAAACCCAGAGAAGATGGAACAGGCAAGGCAGGCCAT
CCTTGACAACCCGACCCTCAAACAGGCCATGTCCCAATTGCCCGGCTTCT
CTGATATGATTGACTCTCCCGAGAAGTGGCGGAAAAACATGGAGATGGCG
CTGGAGATGTTCAAGGCACAGAAGGCAATGATGCAGCAGCAGGGAGGTGA
CGCGGACGACGGTGTAGCCGACGTTGACGACCTGGACGACGATTAAATTG
ACTCTCCCGAGAAGTGGCGGAAAAACATGGAGATGGCGCTGGAGATGTTC
AAGGCACAGAAGGCAATGATGCAGCAGCAGGGAGGTGACGCGGACGACGG
TGTAGCCGACGTTGACGACCTGGACGACGATTAA
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