mRNA_P-fluviatile_contig1.585.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.500e-73 Identity = 147/253 (58.10%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 1 MPSTLSKASGSADPTIATTDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVLLCTIRFITNTWP*AKT*SRRERTLKRGLVA*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKIL-------------------LRANANPLLSAYGSLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQGG 702
MPSTLSKASGS + +ATTDIDR CGD N TPLMVASVIGSSRVV+DLLRQGASVSV + A S R L + + + A G LRANANPLLSAYGSLPL AVYNGHLKVV ELVHWYGTDRCT+DGG LALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLLRRQGG
Sbjct: 1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVA-------DSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGG 246
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 239 bits (611), Expect = 2.420e-70 Identity = 145/246 (58.94%), Postives = 151/246 (61.38%), Query Frame = 1
Query: 1 MPSTLSKASGSADPTIATTDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSV------------LLCTIRFITNTWP*AKT*SRRERTLKRGLVA*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQGG 702
MPSTLSKASGSADPTIATTDIDR CG NQTPLMVASVIGSSRVVRDLLRQGASVSV + ++ ANANPLLSAYGSLPL MAVY+GHL+VVRELVHWYGTDRCTSDGGALALATAASRKHVDIV FLC+AGVVDTEGVALCAAIEGCSEACV LLLRRQGG
Sbjct: 422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGG 667
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.740e-63 Identity = 123/173 (71.10%), Postives = 128/173 (73.99%), Query Frame = 1
Query: 1 MPSTLSKASGSADPTIATTDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVLL---CTIRFIT---NTWP*AKT*SRRERTLKRGLVA*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLYMAVYNGHLKVVREL 501
MPSTLSKASGS DPTIATT IDRGCGD NQTPLMVASVIGSSRVVRDLLRQGASVSV CT + N +K L+ DTPLHVAATKGFCQ MKLLMDSRLDDGATPLF AA DG LE V++LLRANANPLLSA GSLPLYMAVYN L R L
Sbjct: 1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLMDSRLDDGATPLFLAASDGRLEAVRVLLRANANPLLSACGSLPLYMAVYNRPLVRNRSL 173
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 201 bits (510), Expect = 4.020e-56 Identity = 129/237 (54.43%), Postives = 137/237 (57.81%), Query Frame = 1
Query: 25 SGSADPTIATTDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVLLCTIRFITNTWP*AKT*SRRERTLKRGLV------A*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANA------NPLLSAYGSLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQG 699
SGS + IATTDIDR CGD NQTPLMVASVIGSSRVVRDLLRQGASVS+ + K + + ++ G DTPLHVAATKGFCQEM NPLLSA ELV+WYGTD CTSDGGALALATAASR VDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLLRRQG
Sbjct: 399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQG 635
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 176 bits (445), Expect = 9.330e-49 Identity = 130/294 (44.22%), Postives = 134/294 (45.58%), Query Frame = 1
Query: 1 MPSTLSKASGSADPTIATTDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSV------------LLCTIRFITNTWP*AKT*SRRERTLKRGLVA*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLY-MAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAI-----------------------------------------------EGCSEACVNLLLRRQGG 702
MPSTLSKASGSADPTIATTDIDR CGD NQTPLMVASVIG SRVVRDLLRQGASVSV + ++ LSAYGSLPLY M RELV+WYG DRCTSDGGALAL TAASRKHVDIVTFL DAGVVDTEGVALCAAI EGCSEACV LLLRRQGG
Sbjct: 7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGG 300
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 156 bits (395), Expect = 6.080e-42 Identity = 101/237 (42.62%), Postives = 134/237 (56.54%), Query Frame = 1
Query: 55 TDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVLLCTIRFITNTWP*AKT*SRRERTLKRG---------------LVA*DTPLHVAATKGFCQEMKLLM------DSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQGG 702
T+IDR C + T LM A+ G R+VR LLR GA VSV + + + + +K G +V TPLH+AA +GFC+ M L+ DSR+ DG+T ++ AA G LE V+IL + ANPLL + PL +A + GHL VV+ELV +G D C +G AL TAA H I+TFL DAGV+DT+G ALC AIEG +EAC+ LL+ R+GG
Sbjct: 42 TEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGG 278
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.730e-38 Identity = 99/237 (41.77%), Postives = 127/237 (53.59%), Query Frame = 1
Query: 55 TDIDRGCGDANQTPLMVASVIGSSRVVRDLLRQGASVSV--------LLCTIRFITNTWP*AKT*SRRERTLKRGLVA*D-------TPLHVAATKGFCQEMKLLMD------SRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQGG 702
T+IDR C + T LM A+ G R+VR LLR GA VSV K + D TPLH+A +GFC M L+D SR+ +G+T ++ AA G L+ VKILL+ ANP+L + PL +A + GHL VV+ELV +G D C+ +G AL TAA H I+TFL DAGV DT+G ALC AIEG SEAC+ LL+ R+GG
Sbjct: 29 TEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGG 265
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.700e-33 Identity = 95/213 (44.60%), Postives = 116/213 (54.46%), Query Frame = 1
Query: 103 VASVIGSSRVVRDLLRQGASVSV----------LLCTIRFITNTWP*AKT*SRRERTLK--RGLVA*DTPLHVAATKGFCQEMKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYG--SLPLYMAVYNGHLKVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRRQG 699
VAS +G RVVR LLR GA VS L + + + K + E + + L TPLHVAA KGF + M +L+ + GVK + A ANP+L+AY SLPL +A NG L VVREL +G D C+ DGGA AL AAS+ VDIVTFL D GVVD EG+ALCAA+EG E C+ LLLR QG
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHA-------------------GVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQG 230
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.280e-18 Identity = 59/131 (45.04%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 271 TPLHVAATKGFCQEMKLLMD------SRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAY------GSLPLYMAVYNGHLKVVRELVHWYGTDRCT-SDGGALALATAASRKHVDIVTFLCDAGVVDT 624
TPL +AA G M L++ SR DGATPLF AA +G ++ V++LL A +PLL+ + SLPL +A GHL+VV EL+ G C S GG AL AA KH+D++T L +AGVVDT
Sbjct: 19 TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT 149
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 2.290e-8 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 442 GSLPLYMAVYNGHLKVVRELVHWYGTDRCT-SDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVNLLLRR 693
G +PL +A + +VRELV G + C SDGG +AL AA H+DI+ L + GVVD+ G+ALCAA+ E V LLL+R
Sbjct: 180 GYVPLDVATEKFRVDIVRELVDDVGIEGCGGSDGGMVALRLAAQNGHLDILHILHERGVVDSSGLALCAALMHGGEKTVKLLLQR 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.585.1 >prot_P-fluviatile_contig1.585.1 ID=prot_P-fluviatile_contig1.585.1|Name=mRNA_P-fluviatile_contig1.585.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=130bp MKLLMDSRLDDGATPLFEAAKDGWLEGVKILLRANANPLLSAYGSLPLYMback to top mRNA from alignment at P-fluviatile_contig1:6314450..6315151+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.585.1 ID=mRNA_P-fluviatile_contig1.585.1|Name=mRNA_P-fluviatile_contig1.585.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=702bp|location=Sequence derived from alignment at P-fluviatile_contig1:6314450..6315151+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:6314450..6315151+ >mRNA_P-fluviatile_contig1.585.1 ID=mRNA_P-fluviatile_contig1.585.1|Name=mRNA_P-fluviatile_contig1.585.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=780bp|location=Sequence derived from alignment at P-fluviatile_contig1:6314450..6315151+ (Porterinema fluviatile SAG_2381)back to top |