mRNA_P-fluviatile_contig1.570.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.570.1 vs. uniprot
Match: D7G501_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G501_ECTSI) HSP 1 Score: 647 bits (1669), Expect = 1.790e-198 Identity = 430/801 (53.68%), Postives = 492/801 (61.42%), Query Frame = 3
Query: 399 AADVERSAVQLVSSLPEETLCKLLASREKAASALQGYVAEHPDPSLRAFSISRLSSACARCWSFLDRRAFVNGAFEEGGDAQRYKQRVRDWMYDFFSSLPRLCDDPSDAVAAAAFSAIGKLLRRHPLCVTAVDHELASFSGSTSRSVQPGGEGEGGGLLARRGV--TAGETISGHKQAFPLQHVGEIVLRSALPRIRRLLHRQSQMVAHARLSQQAXXXXXXXXXTAIRACTVLLVAALRLSTSPSGAPIENPILKNSTSADFLGANGNKKKAVVS--RGNSARGVGSGXXXXXXXXXXXXXXXXXXDLDATLHPKKLAEIWVSVRLRDVLGERRGGDPVVVEAAAWATLRVLQTAAMEPLRLSTAPRLAEAFLRVLLAGQATTPEHLWPSLHAGQEEAAAGSALALRLASPTAASALAPHLLAAAERAPQPRHRLTLLADVFFLMLVRPGRGGRAPSAAGGGHPXXXXXXXXXXXXSQHGRRDGHGGGGKAGASTGITGA-----RVLVSVLKGEWFARLMSDLSGSGGGARXLXFREXAVAALTTTCAQVLVAGSVAATSLTAGDAAAIGIGTLARSCGG---GNSGLSTTATGPPSGNVIDREGGGPVVGNATTKFVAGSSTAGAAAVAA-AERGRWSDLETWLDCSLSALETCSRCVSWTSSIGYIGGLAYVRLLSLALRMLCPLAAPAATTATARDAGGDGTSAARDNDADRLLFGDCLYNGGRGGGAVEEGGALDGFITGRGDRDGRLGWARRRLAQVVDDLMWRLREGLPGRDVRLRLLQATCAHVRLSAMDGG 2762
+A+VE++AVQLVSSLPEETLCK+LA+RE RVRDW++DFFSSLP+LCDDPS+ VAAAAFSAI LLR HPLC TAVD E+ F G S VQP G+G G+ RG T G GHKQAFPLQHVGEIVLRSALPRIRRLLHRQS+MV A A+RAC ++VAALRLSTSPSG PIENP+L+N TS DFLG KK A+ S GN A GS DLDATL PK LAE W+ RL +L RGGD ++VE AAWATLRVL T AM PLR+S APR+AEAFLRVL+AG+A TP+HLWPSLHAG +E AAG+ALALRLASP+A +ALAPH+LAAAER PQPR RL LLADVFFL+LVRPGR GRAP GG S G R+ GG+ G + TGA ++L SVL EWF +L+SD G AR L FRE AVA L TTCAQVL AG VAA S A AAA+GIG LARSC + S T+ G +G+ + GN F A A++GRWSDLETWLDCSL+ALE +RCV+W S GY+GGLAYVRLLSL LR+LCPL TA D+G D SA+ ADR+L G Y GG G G V+ G ALD T G R GRL WAR+RLA VVDDLMWRLREGLPGRD+RLRLLQATC HV LSA+ G
Sbjct: 31 SAEVEQAAVQLVSSLPEETLCKVLANRE----------------------------------------------------------RVRDWIHDFFSSLPKLCDDPSNIVAAAAFSAIEALLREHPLCETAVDKEVRGFWGLES-DVQPEGKG---GVKEGRGSRGTPGGMFGGHKQAFPLQHVGEIVLRSALPRIRRLLHRQSRMVVDGEPQTAAP---------AMRACASVMVAALRLSTSPSGKPIENPLLQNPTSVDFLGV---KKSALGSGPSGNDAGAEGS------------TGKEEEKDLDATLPPKDLAEEWLRARLGGILEGGRGGDALLVETAAWATLRVLHTVAMGPLRVSFAPRVAEAFLRVLVAGKAATPKHLWPSLHAGHQEVAAGAALALRLASPSATAALAPHVLAAAERVPQPRQRLALLADVFFLLLVRPGRNGRAPCVGGGS-------------GSGGGERNDDRQGGEGGTGSSRTGAPREGPKMLASVLDEEWFEQLVSDSPGRS--ARRLLFREEAVAVLVTTCAQVLAAGVVAALSPAAEKAAAVGIGNLARSCDSRCRATAARSDTSEGHKNGSSV---------GNGNANFAAXXXXXXXXXXXXXAKKGRWSDLETWLDCSLTALEAFTRCVNWNSKTGYVGGLAYVRLLSLVLRLLCPL------TAAPADSGDDRDSAST---ADRVLLGGRSY-GGDGKGGVDVGVALDDDSTAGGGR-GRLAWARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHVGLSAVVSG 710
BLAST of mRNA_P-fluviatile_contig1.570.1 vs. uniprot
Match: A0A836CDV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.530e-31 Identity = 194/695 (27.91%), Postives = 269/695 (38.71%), Query Frame = 3
Query: 417 SAVQLVSSLPEETLCKLLASREKAASALQGYVAEHPDPSLRAFSISRLSSACARCWSFLDRRA---------FVNGAFEEGGDAQRYKQRVRDWMYDFFSSLPRLCDDPSDAVAAAAFSAIGKLLRRHPLCVTAVDHELASFSGSTSRSVQPGGEGEGGGLLARRGVTAGETISGHKQAFPLQHVGEIVLRSALPRIRRLLHRQSQMVAHARLSQQAXXXXXXXXXTAIRACTVLLVAALRLSTSPSGAPIENPILKNSTSADFLGANGNKKKAVVSRGNSARGVGSGXXXXXXXXXXXXXXXXXXDLDATLHPKKLAEI--WVSVRLRDVLGERRGGDPVVVEAAAWATLRVLQTAAMEPLRLSTAPRLAEAFLRVLLAGQATTPEHLWPS----LHAGQEEAAAGSALALRLASPTAASALAPHLLAAAERAPQPRHRLTLLADVFFLMLVRPGRGGRAPSAAGGGHPXXXXXXXXXXXXSQHGRRDGHGGGGKAGASTGITGARVLVSVLKGEWFARLMSDLSGSGGGARX---------LXFREXAVAALTTTCAQVLVAGSVAATSLTAGDAAAIGIGTLARSCGGGNSGLSTTATGPPSGNVIDREGGGPVVGNATTKFVAG---SSTAGAAAVAAAERGRWSDLETWLDCSLSALETCSRCVSWT--SSIGYIGGLAYVRLLSLALRM 2414
+ ++L +LP E L K + A L+ A HP+ LRA +++ ++ A ARC ++ F GA+E GG+ QR +Q + DW+ + ++ LC+D DAVAAAAF+A+G LR +PLC TA+D ++A + AR +A K AFPLQ +GE VLR+ALP + RLL R + +R S A+R C L VAALR S G+ L S LG G +A A P LA + W+ + +L G D VE A + TLRVL + P R AP +A L+AGQ R A P A L L+ A P+P RL L+A+ FF ++V GGRA A +L ++L+ +W +++ + + X + FRE VAALT TCA VL AG+ A + TA A A +SG + PS PV V + A AA AAAER W DLE W+ S + L CV W ++ G Y RLL+L LR+
Sbjct: 142 AVLRLALALPGEALPKFILLAGVARMLLE-CAAFHPNSMLRAAAVAEVTDAAARCAAWCGXXXXXXXXXXXFFNGGAYESGGEVQRAQQVLWDWVLEVYARTVVLCEDEDDAVAAAAFAALGGPLRTYPLCATALDTDIAVLLNGAEPA-------------ARLDASASS-----KAAFPLQQLGEGVLRAALPALPRLLARSCTLGRGSRCS-------------ALRTCCRLAVAALRAGYSACGSTFIGSRLLEKVSRGGLGGRGAAAEAP----------------------------------AASAPPLLASVDSWLRTGVLPLLS---GLDAEEVECAVFTTLRVLHAPPLRPQRALLAPAVAXXXXXXXXXXXXXXXXXXXXXXXXXLNAGQAALXXXXXXXXRWAPPQALPPLLAALVPAVALCPEPGQRLGLMAEAFFAVMVCMPGGGRANKPA------------------------------------------ILEAILESDWLHGVLNADAPTAAXXXXXXXXXXXXXVPFREELVAALTHTCAYVLTAGATAIAAATAPSADA-------------DSGDDVNGSSLPS----------PVQQQLPLSGVGRYPLAPHAPDAAAAAAER--WCDLERWVTMSGAVLHATGLCVGWDGGAASASAGADGYTRLLTLILRL 700 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.570.1 >prot_P-fluviatile_contig1.570.1 ID=prot_P-fluviatile_contig1.570.1|Name=mRNA_P-fluviatile_contig1.570.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=701bp MYDFFSSLPRLCDDPSDAVAAAAFSAIGKLLRRHPLCVTAVDHELASFSGback to top mRNA from alignment at P-fluviatile_contig1:6135079..6150231+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.570.1 ID=mRNA_P-fluviatile_contig1.570.1|Name=mRNA_P-fluviatile_contig1.570.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15153bp|location=Sequence derived from alignment at P-fluviatile_contig1:6135079..6150231+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:6135079..6150231+ >mRNA_P-fluviatile_contig1.570.1 ID=mRNA_P-fluviatile_contig1.570.1|Name=mRNA_P-fluviatile_contig1.570.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4206bp|location=Sequence derived from alignment at P-fluviatile_contig1:6135079..6150231+ (Porterinema fluviatile SAG_2381)back to top |