mRNA_P-fluviatile_contig1.57.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Match: D7FJI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI0_ECTSI) HSP 1 Score: 355 bits (910), Expect = 4.500e-111 Identity = 190/249 (76.31%), Postives = 216/249 (86.75%), Query Frame = 3
Query: 1884 MRHIPR--AATEAKDGATTSYANEGGPFAVASPQET---SSSKKKALTSLSSSHELFSSLEEERLQDAAAGALARSRKVAKQTWADVGHGGIGNDAGTDRSSSFYADPSERFTTTNAERYAPLIKMERIEKGQRSAGFCRRRPGDSATEASWRQRKSENRSAKLQENMQRVALSVKTEEVAKRLKEERRVRGKARTRLRYNQWVNSLDNWLSDEAPKLADYNKRQFPVQNIRLRGGQQVHEVLGGPAAI 2615
MRH+PR A KDGA+TS+ +EGGPFA A QE S S K +L SLSS H+LFSSLEE RLQDA AGALAR+RKVAKQTWAD+GHGGIGNDAGTD SSSFYA PSERFTTTN+ERYAPLIKM++IEKGQRSAGFCR+R GDSATEAS R +KSE+RS KL+E+M+R++LSVKTEEVA RLKEERRVRGKARTRLRY++WVNS+DNWL DE PKLADY+KRQFPVQ+ R+RGGQQ+HE LGGP AI
Sbjct: 1 MRHLPRTSAMRRGKDGASTSFGSEGGPFAEAPLQEQGEGSLSPKTSLASLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQSSRIRGGQQMHEALGGPMAI 249
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Match: D7FJI1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI1_ECTSI) HSP 1 Score: 300 bits (769), Expect = 2.600e-90 Identity = 154/207 (74.40%), Postives = 177/207 (85.51%), Query Frame = 3
Query: 1044 KSGSIELDEFARFLGRSEPKCAPPGQLSVWQKLEQQRQADDKENRSVKLQPIHDHKAQRIKNKLSYCLNRAVPNASAGLADNRTMFLKKQFSFLNENAASQGITSDQFLLALGPRGMNLGVSHDDLRLLWKEMDTNGDGSVTLKEFAAFVNLDDHEPLYQPLFDGRRRNVNILQSMVEQDPPAESPEEAFFKARADQLHSAAVPSKD 1664
KSG IELDEFA FLG+SE K A G S QK + Q+QADD E RSV LQPI DHKAQRIKNKL++C+ +AVPNAS GLADNRTMFLKKQF+FL+E+AAS+GI+ + + ALGPRGMNLGV+ +DLRLL KEMDTN DG++T+KEFAAF+NLDDH+PLYQPLFDGRRRNVNILQ+MVEQ PP ESPEE FFKARAD LHS AVPSK+
Sbjct: 72 KSGGIELDEFADFLGQSETKGASSGDPSALQKEKTQQQADDVEARSVTLQPIQDHKAQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNCDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQAMVEQAPPVESPEEEFFKARADHLHSVAVPSKE 278
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Match: A0A7R9YBQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ5_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.750e-28 Identity = 76/235 (32.34%), Postives = 133/235 (56.60%), Query Frame = 3
Query: 843 INRASERLGDIATLKYGSIREFFRLYDSNCDGGLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDVDKSGSIELDEFARFLGRSEPKCAPPGQLSVWQKLEQQRQADDKENRSVKLQPIHDHKAQRIKNKL-SYCLNRAVPNASAGLADNRTMFLKKQFSFLNENAASQGITSDQFLLALGPRGMNLGVSHDDLRLLWKEMDTNGDGSVTLKEFAAFVNLDDHEPLYQPLFDGRR 1544
++RA RL + LKYGS+R+FF +D N +G + +EFS L+ L PR QR +F+++D D+SGS++L+EF L R + + Q L++ R ++ + VKL+ + +A+ +++ L R + + + +T +L F ++++ +++D+F ALGP G+N+ DDLR++++ MD N D ++ EF F+N+DD +P Y P +DGRR
Sbjct: 164 LDRAIGRLQQLLVLKYGSVRDFFHTFDENHNGKITLEEFSRTFKRRNLERLIPRREQRLIFERLDADQSGSLDLEEFKSALTR---------ETAFSQPLDRMR--EEAREKGVKLRRTNP-RAELVRDALLQKVTQRLRMSKESDSVERKTAYLLNIFKQIDKDMTGL-LSADEFAAALGPGGLNVCAKEDDLRMVFEAMDVNEDERISYSEFIDFLNVDDIDPEYNPFYDGRR 385
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Match: A0A7S3GBD9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GBD9_9EUKA) HSP 1 Score: 60.5 bits (145), Expect = 1.620e-5 Identity = 52/207 (25.12%), Postives = 90/207 (43.48%), Query Frame = 3
Query: 885 KYGSIREFFRLYDSNCDGGLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDVDKSGSIELDEFARFLGRSEPKCA---PPGQLSVWQKLEQQRQADDKENRSVKLQPIHDHKAQRIKNKLSYCLNRAVPNASAGLAD---NRTMFLKKQFSFLNENAASQGITSDQFLLALGPRGMNLGVSHDDLRLLWKEMDTNGDGSVTLKEFAA 1487
K+ +R FR +D + G + EF ++M ++ + P L L D + G + +EF + +PK PP W+ HD + R+K K ++ + +V A L + N +KK F + + Q I+ D+F + L +NL +S ++LR LW+ +DT+ G ++L EF A
Sbjct: 279 KHSELRHTFRRFDEDKSGSISVSEFQRALSMIHVE-IHPTELSE-LIKTFDSNGDGVVNYEEFVTQIESIDPKAQLLRPP----KWR---------------------HDIRRPRLKKKKNHFRSASVAELEAALHEKIHNARRRIKKAFDDFDYDQDGQ-ISYDEFRVCLDR--INLSLSENELRQLWRVVDTDNSGKISLDEFVA 455
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Match: A0A7S3DFV0_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFV0_9EUKA) HSP 1 Score: 60.5 bits (145), Expect = 2.040e-5 Identity = 52/207 (25.12%), Postives = 90/207 (43.48%), Query Frame = 3
Query: 885 KYGSIREFFRLYDSNCDGGLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDVDKSGSIELDEFARFLGRSEPKCA---PPGQLSVWQKLEQQRQADDKENRSVKLQPIHDHKAQRIKNKLSYCLNRAVPNASAGLAD---NRTMFLKKQFSFLNENAASQGITSDQFLLALGPRGMNLGVSHDDLRLLWKEMDTNGDGSVTLKEFAA 1487
K+ +R FR +D + G + EF ++M ++ + P L L D + G + +EF + +PK PP W+ HD + R+K K ++ + +V A L + N +KK F + + Q I+ D+F + L +NL +S ++LR LW+ +DT+ G ++L EF A
Sbjct: 279 KHSELRHTFRRFDEDKSGSISVSEFQRALSMIHVE-IHPTELSE-LIKTFDSNGDGVVNYEEFVTQIESIDPKAQLLRPP----KWR---------------------HDIRRPRLKKKKNHFRSASVAELEAALHEKIHNARRRIKKAFDDFDYDQDGQ-ISYDEFRVCLDR--INLSLSENELRQLWRVVDTDNSGKISLDEFVA 455 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.57.1 >prot_P-fluviatile_contig1.57.1 ID=prot_P-fluviatile_contig1.57.1|Name=mRNA_P-fluviatile_contig1.57.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=786bp MEGKGPVSARSGRKRTQVGATNRSDAVLPTAATTAAAAAAASQSEVQGRRback to top mRNA from alignment at P-fluviatile_contig1:884865..895583- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.57.1 ID=mRNA_P-fluviatile_contig1.57.1|Name=mRNA_P-fluviatile_contig1.57.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10719bp|location=Sequence derived from alignment at P-fluviatile_contig1:884865..895583- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:884865..895583- >mRNA_P-fluviatile_contig1.57.1 ID=mRNA_P-fluviatile_contig1.57.1|Name=mRNA_P-fluviatile_contig1.57.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4716bp|location=Sequence derived from alignment at P-fluviatile_contig1:884865..895583- (Porterinema fluviatile SAG_2381)back to top |