mRNA_P-fluviatile_contig1.567.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.567.1
Unique NamemRNA_P-fluviatile_contig1.567.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: D8LFM0_ECTSI (Peptidyl prolyl cis/trans isomerase like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM0_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.030e-162
Identity = 249/327 (76.15%), Postives = 267/327 (81.65%), Query Frame = 3 
Query:   15 MRFSWSFSHQQAAMTLIVCRRITSAFVAAPRGSVQANSAAFPMAPPS-------NIRWLHAVPAERWLYQTANLGAPRAAAAAFPIPGRSPPPPRPCSGRPLLMSSATGAVSGEEICRAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            MRFS S S QQAA+ LIV RR  SAFVAAPRG V A S A PM   S       N RW+HAVPA        +LG P+               PRPC+GRPL+MSSAT AV+GEEICRAAH+LCAD +AAEAALTRIK GEQFGDVA DMSSCPSK+KGGDLGWFKKGQMVAEFEAACFEND GTIVKVQTQFGWHVVALLSRAILPRQM VEELGEILE  KSG  DV+SKYQFVDVREEEELGKAKLDGFVNLPLSKF EW DKLSGEGA+LD+EKDT++MCHHGMRSNQMAQHLATKAGFK+VWNVEGGLHAYA+ VD+SVGVY
Sbjct:    1 MRFSCSLSRQQAAVALIVGRRFASAFVAAPRGGVLAGSTALPMRAQSCNSLAGSNRRWIHAVPAAG-----TSLGLPQQ--------------PRPCTGRPLMMSSATDAVTGEEICRAAHVLCADEDAAEAALTRIKSGEQFGDVATDMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELGKAKLDGFVNLPLSKFEEWSDKLSGEGAILDAEKDTVIMCHHGMRSNQMAQHLATKAGFKRVWNVEGGLHAYASHVDSSVGVY 308
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BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: M2Y4U7_GALSU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4U7_GALSU)

HSP 1 Score: 195 bits (496), Expect = 9.210e-56
Identity = 101/212 (47.64%), Postives = 141/212 (66.51%), Query Frame = 3 
Query:  339 ICRAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            I RA HIL      A+  L ++K+G+ F ++A  +S CPSKE+GG+LGWF++G MVA FE ACF+     ++K+QT++GWHV+ +  +AI P  +TVE+  +I     S         Q VDVRE+ EL  A+LD F +LPL ++ +W +++   G LLD EK+TIVMCHHG+RS QM  +LA + GF KV N+ GG+ AYA QVD S+GVY
Sbjct:   12 IVRARHILVETEGMADTLLEQLKNGQHFAELAKAVSRCPSKERGGELGWFRRGTMVASFEDACFQGKPDQLIKIQTEYGWHVIQVQGQAIEPGSITVEDFAKIYPHQIS-------HVQLVDVREQNELELARLDHFFHLPLGEYEKWAEQVES-GELLDKEKETIVMCHHGIRSAQMCSYLAQQ-GFLKVRNLIGGIDAYAHQVDPSIGVY 214
[Close]
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A7S2Y1W3_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1W3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.800e-53
Identity = 101/209 (48.33%), Postives = 135/209 (64.59%), Query Frame = 3 
Query:  345 RAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEEL--GKAKLD-GFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTS 962
            +A+HIL    E A+  L R+ DGE F  +A+D S CPSK +GGDLGWF KGQMV EFE  CF    G +  V+TQFGWHV+ +  +   P+ + V+EL E+LE  + G      + Q +DVRE +EL  GK   D GF+NLPLS+F  WG K+  +G LLD  K TI +CHHG+RS Q    LA++AGF+ V NV GG++ Y+ ++D S
Sbjct:   64 KASHILVKSEETAKMLLERVNDGEDFAALASDNSDCPSKAQGGDLGWFGKGQMVPEFENVCFTGVKGDVSLVETQFGWHVIKIEGQGFPPKDIDVKELAEVLETTERG------EVQLIDVREADELEGGKNLTDKGFINLPLSEFQTWGRKVV-DGDLLDKSKRTICLCHHGIRSRQAGNFLASQAGFEDVANVVGGINNYSDKIDPS 265
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BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A4D9D039_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D039_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.260e-53
Identity = 97/213 (45.54%), Postives = 139/213 (65.26%), Query Frame = 3 
Query:  345 RAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDG--FVNLPLSKFPEWGDK-LSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            RAAHIL    E A+A +  +++G  F ++A   S CPS+++GGDLGWF  GQMV  FE  CF N  G + KVQT+FG+H++ +  +A  P      +LG+++    +GG +   + Q +DVRE +EL +A++ G  F+NLPLS+F EW  K LSGE  LLD +K T+V+CHHG RS Q A  L ++AGF +V+N+ GG+H YA  VD+ +  Y
Sbjct:   16 RAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFGPGQMVPAFEEVCFNNPVGALAKVQTEFGYHIIQVNGKATAPGDWHPSQLGDLV----AGGQEGREEVQLIDVREPDELLRAEIKGAGFLNLPLSQFAEWRPKILSGE--LLDKDKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 222
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BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: I2CR14_NANGC (Peptidyl prolyl cis trans isomerase like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR14_NANGC)

HSP 1 Score: 187 bits (475), Expect = 1.940e-51
Identity = 97/213 (45.54%), Postives = 138/213 (64.79%), Query Frame = 3 
Query:  345 RAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDG--FVNLPLSKFPEWGDK-LSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            RAAHIL    E A+A +  +++G  F ++A   S CPS+++GGDLGWF  GQMV  FE  CF N  G + KVQT+FG+H++ +  +A  P      +LG+++    +GG +   + Q +DVRE +EL +A++ G  F+NLPLS+F EW  K LSGE  LLD  K T+V+CHHG RS Q A  L ++AGF +V+N+ GG+H YA  VD+ +  Y
Sbjct:  105 RAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFGPGQMVPAFEEVCFNNPVGALAKVQTEFGYHIIQVNGKATAPGDWHPSQLGDLV----AGGQEGREEVQLIDVREPDELLRAEIKGAGFLNLPLSQFAEWRPKILSGE--LLDKNKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 311
[Close]
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A7S2JMB7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JMB7_9EUKA)

HSP 1 Score: 179 bits (455), Expect = 9.490e-49
Identity = 101/207 (48.79%), Postives = 134/207 (64.73%), Query Frame = 3 
Query:  345 RAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFE-NDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTS 962
            RA+HIL +  E A+  L R+  GE F  +A + SSCPS  KGGDLGWFK+G MV EFE A FE ++   +VKV+TQFGWH++ +  +      ++ EE  +IL++    G  V    Q VDVREE+EL  A L GF+NLPL++  +W  ++ G G LLD  K+TIVMCHHGMRS QM   L  + GF KV N+ GG++AY+  VD S
Sbjct:   96 RASHILVSGEEQADEILARLNKGEDFAKLARENSSCPSGMKGGDLGWFKRGMMVPEFEQASFEASNLNKVVKVKTQFGWHLLTVTGQRAGIGAVSAEEFKKILDER---GDQV----QLVDVREEDELRLASLPGFINLPLTQAEKWAPEVEG-GVLLDKSKETIVMCHHGMRSAQMCGFLE-RVGFDKVKNLTGGINAYSNNVDPS 293
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BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A8J5X8B1_DIALT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8B1_DIALT)

HSP 1 Score: 174 bits (441), Expect = 5.500e-47
Identity = 99/239 (41.42%), Postives = 148/239 (61.92%), Query Frame = 3 
Query:  276 RPCS--GRPLLMSSATGAV--SGEEICRAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDG--FVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            RP S   R  +++SA GA   +     RAAHIL    E A+A   +++ G  FGD+A  +S C S+ +GG+LGWF  G M  +FE ACF+   G++VKVQ++FGWH++ +      P  ++  EL   ++      +DV    QFVDVR  +E+ +A + G  +VNLP +++ EWGDK++  G LL+ EK+TIV+CHHGMRS++ AQ +    GF+ V ++ GG+ AYA + D +VG Y
Sbjct:   28 RPASRLARSAVLASAQGATETARPNQARAAHILVDTEELADAIRAQVEGGMSFGDIAKTVSLCTSRSRGGNLGWFSAGMMTPDFERACFDATPGSLVKVQSEFGWHLIHVEETRAAPTDVSPAELKRRID-----ANDVHG-VQFVDVRSADEVSRASIPGVQWVNLPFNEYSEWGDKVAA-GELLEHEKETIVICHHGMRSSRTAQFMLQN-GFRSVVSLLGGIDAYAAEADPAVGRY 258
[Close]
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A2V3IYG3_9FLOR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYG3_9FLOR)

HSP 1 Score: 170 bits (431), Expect = 2.520e-46
Identity = 88/211 (41.71%), Postives = 129/211 (61.14%), Query Frame = 3 
Query:  345 RAAHILCADAEAAEAALTRIKDGE-QFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            RA HIL    E  +A   +++DG+  F D+A  +S+CPSK++GGDLGWFK+  MV EFE A F N  G++VKV+++FGWH++ +    +  + +TV+ELG    +    G+D     Q +D RE  EL  + L  F+NLP+ ++  W D+       L+ +K+TIVMCHHG+RS      LA + GF  V N+ GG+ AYA ++D SV  Y
Sbjct:    3 RAKHILVDSEEMIDAIKQQLEDGKGNFADLAKLVSTCPSKDRGGDLGWFKRNIMVKEFEEAAFSNPPGSVVKVKSEFGWHLIQVEEHGMAAKSITVDELGR---RFGKDGTDDPLSVQLIDCRETSELELSSLPNFLNLPMGEYARWADQFENGKLSLEKDKETIVMCHHGIRSANFCSFLA-QHGFTNVRNLIGGIDAYAKKIDNSVPQY 209
[Close]
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: S8D8K8_9LAMI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D8K8_9LAMI)

HSP 1 Score: 169 bits (428), Expect = 9.870e-46
Identity = 92/194 (47.42%), Postives = 123/194 (63.40%), Query Frame = 3 
Query:  399 RIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRA--ILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            R  +GE  GD+A + S CPSK+ GG LGW + GQMV EFE A F      IV  +T+FGWH++ +LS    +L +Q+   EL E ++          ++ Q +DVRE +E+ KA L GF  LPL +F +WG  +S E    D EKDT V+CHHGMRS Q+AQ L T+ GFK+V+NV GG+H YA +VD S+ VY
Sbjct:   37 RASEGEDLGDLAVEYSICPSKDDGGMLGWVRTGQMVPEFEEAAFNAPLNKIVSCKTKFGWHLLQVLSERDQLLLKQIQPSELHERMQD-----PSFFNEAQLIDVREPDEVAKAALPGFKVLPLRQFAKWGPVISSE---FDPEKDTYVLCHHGMRSLQVAQWLQTQ-GFKRVFNVSGGIHEYAVKVDESIPVY 221
[Close]
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Match: A0A1S3UCQ9_VIGRR (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Vigna TaxID=3913 RepID=A0A1S3UCQ9_VIGRR)

HSP 1 Score: 169 bits (428), Expect = 6.690e-45
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 3 
Query:  393 LTRIKDGEQFGDVAADMSSCPSKEKGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSR---AILPRQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPLSKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYATQVDTSVGVY 974
            L +I  GE   D+A + S CPSKE+GG LGW KKGQMV EFE A F      +VK +T+FGWH++ +LS    +IL      E  G+I +       +   + Q +DVRE EE+ KA L GF  LPL +F  WG +++ +   LD EKD  VMCHHGMRS Q+A+ L ++ GF+KV+NV GG+HAYA QVD SV  Y
Sbjct:  102 LQKISSGEDLSDLAVEHSLCPSKEEGGMLGWVKKGQMVPEFEEAAFSAPLNKVVKCKTKFGWHLLQVLSEREESILQDIQPHELHGKIQD------PNFLEEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITKK---LDPEKDIYVMCHHGMRSLQVARWLLSQ-GFRKVYNVSGGIHAYAVQVDPSVPTY 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM0_ECTSI1.030e-16276.15Peptidyl prolyl cis/trans isomerase like n=2 Tax=E... [more]
M2Y4U7_GALSU9.210e-5647.64Peptidyl-prolyl cis-trans isomerase n=1 Tax=Galdie... [more]
A0A7S2Y1W3_9STRA1.800e-5348.33Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A4D9D039_9STRA7.260e-5345.54Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc... [more]
I2CR14_NANGC1.940e-5145.54Peptidyl prolyl cis trans isomerase like protein n... [more]
A0A7S2JMB7_9EUKA9.490e-4948.79Hypothetical protein (Fragment) n=1 Tax=Cyanoptych... [more]
A0A8J5X8B1_DIALT5.500e-4741.42Peptidyl-prolyl cis-trans isomerase n=1 Tax=Diacro... [more]
A0A2V3IYG3_9FLOR2.520e-4641.71Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
S8D8K8_9LAMI9.870e-4647.42Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A1S3UCQ9_VIGRR6.690e-4548.22Peptidyl-prolyl cis-trans isomerase n=3 Tax=Vigna ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:6112991..6117806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.9
Seed ortholog evalue9e-133
Seed eggNOG ortholog2880.D8LFM0
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050896
EggNOG free text desc.thiosulfate sulfurtransferase activity
EggNOG OGsCOG0476@1,KOG2017@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionpeptidyl prolyl cis/trans isomerase like
Ec32 orthologEc-04_001720.1
Exons6
Model size1599
Cds size963
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.567.1prot_P-fluviatile_contig1.567.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 6113005..6117184 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815353.6766894-UTR-P-fluviatile_contig1:6112990..61130041622815353.6766894-UTR-P-fluviatile_contig1:6112990..6113004Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 6112991..6113004 +
1693561570.0788808-UTR-P-fluviatile_contig1:6112990..61130041693561570.0788808-UTR-P-fluviatile_contig1:6112990..6113004Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 6112991..6113004 +
1622815353.7547288-UTR-P-fluviatile_contig1:6117184..61178061622815353.7547288-UTR-P-fluviatile_contig1:6117184..6117806Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 6117185..6117806 +
1693561570.657722-UTR-P-fluviatile_contig1:6117184..61178061693561570.657722-UTR-P-fluviatile_contig1:6117184..6117806Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 6117185..6117806 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815353.6881106-CDS-P-fluviatile_contig1:6113004..61131501622815353.6881106-CDS-P-fluviatile_contig1:6113004..6113150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6113005..6113150 +
1693561570.5907094-CDS-P-fluviatile_contig1:6113004..61131501693561570.5907094-CDS-P-fluviatile_contig1:6113004..6113150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6113005..6113150 +
1622815353.6973372-CDS-P-fluviatile_contig1:6113790..61139761622815353.6973372-CDS-P-fluviatile_contig1:6113790..6113976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6113791..6113976 +
1693561570.6085951-CDS-P-fluviatile_contig1:6113790..61139761693561570.6085951-CDS-P-fluviatile_contig1:6113790..6113976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6113791..6113976 +
1622815353.7063262-CDS-P-fluviatile_contig1:6114871..61151091622815353.7063262-CDS-P-fluviatile_contig1:6114871..6115109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6114872..6115109 +
1693561570.6178443-CDS-P-fluviatile_contig1:6114871..61151091693561570.6178443-CDS-P-fluviatile_contig1:6114871..6115109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6114872..6115109 +
1622815353.7163985-CDS-P-fluviatile_contig1:6115756..61159161622815353.7163985-CDS-P-fluviatile_contig1:6115756..6115916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6115757..6115916 +
1693561570.6273766-CDS-P-fluviatile_contig1:6115756..61159161693561570.6273766-CDS-P-fluviatile_contig1:6115756..6115916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6115757..6115916 +
1622815353.7262957-CDS-P-fluviatile_contig1:6116422..61165371622815353.7262957-CDS-P-fluviatile_contig1:6116422..6116537Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6116423..6116537 +
1693561570.636975-CDS-P-fluviatile_contig1:6116422..61165371693561570.636975-CDS-P-fluviatile_contig1:6116422..6116537Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6116423..6116537 +
1622815353.7397037-CDS-P-fluviatile_contig1:6117066..61171841622815353.7397037-CDS-P-fluviatile_contig1:6117066..6117184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6117067..6117184 +
1693561570.6485157-CDS-P-fluviatile_contig1:6117066..61171841693561570.6485157-CDS-P-fluviatile_contig1:6117066..6117184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 6117067..6117184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.567.1

>prot_P-fluviatile_contig1.567.1 ID=prot_P-fluviatile_contig1.567.1|Name=mRNA_P-fluviatile_contig1.567.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=321bp
MRFSWSFSHQQAAMTLIVCRRITSAFVAAPRGSVQANSAAFPMAPPSNIR
WLHAVPAERWLYQTANLGAPRAAAAAFPIPGRSPPPPRPCSGRPLLMSSA
TGAVSGEEICRAAHILCADAEAAEAALTRIKDGEQFGDVAADMSSCPSKE
KGGDLGWFKKGQMVAEFEAACFENDSGTIVKVQTQFGWHVVALLSRAILP
RQMTVEELGEILEQLKSGGSDVESKYQFVDVREEEELGKAKLDGFVNLPL
SKFPEWGDKLSGEGALLDSEKDTIVMCHHGMRSNQMAQHLATKAGFKKVW
NVEGGLHAYATQVDTSVGVY*
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mRNA from alignment at P-fluviatile_contig1:6112991..6117806+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.567.1 ID=mRNA_P-fluviatile_contig1.567.1|Name=mRNA_P-fluviatile_contig1.567.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4816bp|location=Sequence derived from alignment at P-fluviatile_contig1:6112991..6117806+ (Porterinema fluviatile SAG_2381)
CAACACCACACACCATGCGCTTCAGCTGGTCCTTCTCTCACCAGCAGGCT
GCTATGACCTTGATTGTCTGTAGGCGCATCACCAGCGCCTTTGTTGCTGC
TCCCCGAGGCTCTGTTCAGGCCAACAGCGCGGCCTTTCCGATGGCGCCGC
CCTCCAACATGTACGTGATTAACACCGCACACACAGGGTTGTAGGTAGCT
GGAGCTTGTCGAGGCCTGACTACGGCTTGGTTACGAAAGCCCTTGCACTA
GAGGAAACCAGCTGTATCATTTACACGCTACGTTGGAGGATGTGTGCTCA
ACGAGTGGACGTCGCTTCGGGTCCGGACATGTGTGTCCCAATCATGACCA
CAGCAGTCGCACGCCATCTGCTCATGAAGATGCTGCTCGGACAGCCGCTT
CGTCGTGCTCTTTGCAACAGGCAGTCCAGGAATCCGACTGTCGATACAAA
GGGCGCCACATGAATATGTGCAGATGATTAGACTGGGAGCCTTATACATA
ATCAGCATCTTTTCTAAAGATGCAGCTCAAGTCCACATCTGAAATCCTGA
ACGTTCGAGAGACAAACGACGGCGGAAAGACTCTGGGACACGAACACTAA
GAATCAGCGTTGATAGCGGGGATTGATAGCGGAGTGCGACAAGAGCAGCG
TCCCAAATCTATCGCACTTTCTTCCTGTGCTTCACTGCCATGTGTCTCTC
CGCATCAACCGCAAATCCTCACCCTCCCCCCCCCCTTGACGCCGCTTCCC
GTGTTTTGACACGCTGGGAAAAAATGTCACACCCTCACGGGAAATAACAG
ACGGTGGCTCCACGCCGTGCCCGCTGAACGGTGGCTGTACCAAACGGCAA
ACCTCGGCGCCCCCCGCGCCGCCGCCGCGGCCTTCCCCATCCCGGGGCGC
TCGCCGCCGCCGCCCCGACCGTGCTCCGGGCGGCCACTACTGATGTCCTC
CGCGACCGGGGCCGTCTCCGGCGAAGAGATTTGCAGGTGCGTCTCGCGAA
AGCGCCCTGCGGTTTCGTTTTCGTGTGTACCTGCTTTCGCCCCGTGGGAG
AGAGGAAAGGGGTTGGAAGGGAGAAGTTGCTTCGCATCGAGGGAGGGAGG
GAAAGTGTTGTAATGGAGAGGTTTACTGTTGTCCCCGACGTGTGAACCAT
TCCGAGAGCAATGTGATACCGTAAGATTGCAAGAGATTCTGTGCGGAGAC
GTCGCCCCCAATATTTCATTCGAGCATCGTGCGCAGCCAAGAAAGGCTGT
ATGAATGCGTACGTATGCTCGCACACCCTCGGCAACCCATGATATTTGCC
GCCGTGGGCCTTTCCTTCGTAAAGTGACACTACCCCGCCGCGAATCACAG
TCGTCCCGGGGTCTGATGGGTAACCTCGAAGACCCGCCAACATTCAAACC
CCGATGACGGTGAAAAACTTGCAGCTTTGGGGTGGAAAGCGAAGAAAGCT
GAAATGCTCGCGAGTATAAGGAATTCGACTTCACCGTTGACGAGGGAGTG
GAACGGCTTAACCGTTTTCGCGGTAAAGAATGAAGTGCGCATCGTAGGAG
GGAGGTGGGGCAGATACGAAATAGAAAAGGTAGGGAAAGGCCCCTGTGTT
CACCCCCTCCTGTGTGACCCCGGCCGGTTGGAGATGTACGACAAAAAACA
CTGGAGAAGTGCGATAACTTTTACAGTTGAACCGAAAAGGCCAACGCTCG
CCCGAATAAAGCAAACGAAAACATAACACACACGACCCACAATTGTGGTT
CCCTGTGATAACGTTGAAATCCGACACGAGGTGGAGAGTGGTTCAGACCC
TTTTTCTCTGCAGAAACTTCATGGAATCTACGAGCAAAGAGAAAACAAGC
CTCCAGTACCTATCCCCCGACAAATGCACAGAGCCGCGCATATCCTGTGC
GCCGACGCGGAGGCGGCCGAGGCCGCCCTAACCCGGATCAAGGACGGCGA
GCAGTTCGGTGACGTCGCCGCGGACATGAGCTCTTGCCCCTCGAAGGAGA
AGGGAGGGGACCTGGGCTGGTTCAAGAAGGGCCAGATGGTGGCAGAGTTC
GAGGCGGCGTGCTTCGAGAACGATTCGGGCACAATCGTGAAGGTCCAGAC
GCAGTTCGGGTGGCACGTGGTGAGGCGGGCGGGCGGGGCTGTTGCGTTTG
TCCCCCTGTGGTGATACGTATGTTAATCTGTTCTTGGAATTAGTGCCGGA
CATTTTGGAGTTGAAACGCGACAGCATTGCCAGCGTAAGCGGATAACCGT
TTTGAGTGCAAAGCCCGGAACAGTGTGTCATCGACGGCATGCCCTTCCCA
GCAAAATTCCCGCCGGTTTGTTCAAACAACCTGCCTGAGGCGTGCGGTAG
ACGTGGCGCGATTGCCTCTGCCTTGGTGCGGCCTTGTGCCAATTAAAATA
GTTGATAGCCCGTGCACGCATTCGTCGTTCACAACAACGCGGCCTTACTT
CTGATCGAATGGTCTCATTGCTGGTTTCAAGTGGCACTTCGGAAGCCTGT
CTACCCTCATCAAACACGCGCTCACCACCAAGACAGCCTTTTGTTTCCTC
CGTGCTGAAACATCCCCCTCCCCTCAAATGCTTGAGGGTCTCCTAGGTAC
TACAGGCGCACACGCCGTGTTCGACGACAATCAGCAGACGCACATGTGTC
CTCGGCAGTGCAGGACATTACTGGAACTGACGTCTCCAAGTATAAACCGC
AAAACAAGCGGCAGCTGGAAACTTATCCCTGCATCTCCAAAGCCTTCCAT
TTTTTATGTCCCTCAGGTGGCGTTGCTCTCGCGGGCGATCTTGCCGCGGC
AGATGACCGTCGAGGAGTTGGGAGAGATCCTAGAGCAGCTGAAGAGCGGG
GGCAGTGACGTCGAGAGTAAATACCAGTTCGTCGACGTCCGAGAAGAGGA
AGAGCTGGGGAAGGCCAAGCTTGACGGTGAGAGGGCAACGAACATGGGGC
GGCAAGGGGGGATGTTTGTGGGTCTGAGGTTGTGAGGCTCTGACTACAGC
GGCAGTAAGAAGGGCGCACAATCAGAGCATTTTGCCTCATGAATCGCAGC
GCAAGCGGCCAATCTGGAATGACTACCGCACTTGCTTTCAAGGCGGCCAC
AAGGATGGCAAGACGATATCGCGAAGAGCAAACGCTCGCGGTGCTGTGTT
TCTGCACGAAAGGTATCGACCTGCGAGGTGTGGGATCGTTTCGAAGGACA
CGTCGCGAGCGAGCCATCGTCTTTGCTGGGTCTGTGAGCGTTGGCAGCGT
TCGTGAAATCTCGGAATTTCTGCCACGTTCACAGAAGCTAGGCACATTGC
CAAATGCGACTCGAAGGGTAAGGAGTCACCAATCATACCAAAAGGACCGC
CGCACACACGCGGCATGTTTCATTTCTATCGTGTCCTGTTCGAGAACTCT
CGTCGCTTTCGCTGAATTTGCATTCACCTCAGGATTTGTGAACCTGCCGC
TTTCGAAGTTCCCGGAGTGGGGTGACAAGCTTTCCGGGGAAGGCGCCCTG
TTGGACTCGGAGAAGGACACCATCGTCATGTGTCATCACGGCATGAGGTG
GGTTCGAGATTTAACCTCCGTCGGGACTGTTTCATTTTTCCTACAGCACT
CTCAGTCCATGCTGCGAGGAGTCTCGAGCTGGATCTTTGCATACAGTTAT
TTCATACCCCCCAATACACGCGCCGGTATTTAAAGGAGTGGGGCAGAGTG
TTTCGAAGGCTCTTCACACCCCTCATTGGGGGGTACTAGCTGGACGTGTG
CAATACGAACGGGGAATATTAGTGGCCGTGGCTATGCATTTGAGTTTTGT
TGTTCAGAGAAGCCCGGTATCTGCACTGGTCCACTCTCAAAGCTTTCGGC
GGGGAGTTCGTGCAAACAACACTCCTACACTTGAGAAGTCCGAGGCAGTT
CATGGGTGGGCGAGGGACCGGTCAAACACGGGAGGATCGCTGACTCTCTC
TGGAAAAATCATCGCCATGGCACTTCGGATTCGTCTGACGTGTACTTGGC
ACGGTCTGCTTTGGATGCCATGTCCTCAACGAGGGATGGCGTTTTCTCCG
CTGCGTGCATCGCAACCAAACCAAAGGTCGAACCAGATGGCCCAGCACCT
GGCGACGAAGGCCGGCTTCAAGAAGGTGTGGAACGTGGAGGGCGGCCTTC
ACGCCTACGCCACCCAGGTCGACACTTCTGTGGGAGTGTACTGATCGGTC
GTCGAGGAAGGGAGATAAAGCCGCAAACTGAGGTCGAGAGCTGCCTTCAA
AGTTGGATTCGGATTATCATGCGGCAGACGTTTGCGGATCAGATGGGTTC
GTAGCCGACTTGCTCAGTCTCTTGTGGAGCGTCGGTAATCTTAACGTTAT
TTGTGACGCATTTGGACGCATTTGGGTACCCCTTCGTTTTGTAGAAATTA
ATCGACACAGGTCTCCGGGGCTCGAACGAGGTTGCAATAGCACGATGCCC
CCCGCTTTTCAGTTGTCAAGTTGAGAGGTCTTCTCTATTTTGCGAATTTC
AACCCGTGAAGATTAATTCCGGTTCGGACTGACACAAAACGAAAGTCTTG
ACCCAGCATTCGTACCCTCATATTTCAGGGCCGCGACTGGTCTGAGCTCA
CAAAGACCGGGTCCGGTTCAACCGAATGTGACGCCGAGAGGTGTGATGAT
TTCTGAAAAAGTGCTTTAATTCGCAAGAGCTGGGCGAGCTGCGCTGGGCC
ACAAGGAAGTGGATGCTGTATGCAGTCCTGCGAGCAGCCTGTGAGCCGAG
GGGCTGGAATTAATGCTTTTATTTCAAGTTCTCCATCTGCATGCACTGAA
TACACTACAACTGAAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:6112991..6117806+

>mRNA_P-fluviatile_contig1.567.1 ID=mRNA_P-fluviatile_contig1.567.1|Name=mRNA_P-fluviatile_contig1.567.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1926bp|location=Sequence derived from alignment at P-fluviatile_contig1:6112991..6117806+ (Porterinema fluviatile SAG_2381)
ATGCGCTTCAGCTGGTCCTTCTCTCACCAGCAGGCTGCTATGACCTTGAT
TGTCTGTAGGCGCATCACCAGCGCCTTTGTTGCTGCTCCCCGAGGCTCTG
TTCAGGCCAACAGCGCGGCCTTTCCGATGGCGCCGCCCTCCAACATATGC
GCTTCAGCTGGTCCTTCTCTCACCAGCAGGCTGCTATGACCTTGATTGTC
TGTAGGCGCATCACCAGCGCCTTTGTTGCTGCTCCCCGAGGCTCTGTTCA
GGCCAACAGCGCGGCCTTTCCGATGGCGCCGCCCTCCAACATACGGTGGC
TCCACGCCGTGCCCGCTGAACGGTGGCTGTACCAAACGGCAAACCTCGGC
GCCCCCCGCGCCGCCGCCGCGGCCTTCCCCATCCCGGGGCGCTCGCCGCC
GCCGCCCCGACCGTGCTCCGGGCGGCCACTACTGATGTCCTCCGCGACCG
GGGCCGTCTCCGGCGAAGAGATTTGCAGACGGTGGCTCCACGCCGTGCCC
GCTGAACGGTGGCTGTACCAAACGGCAAACCTCGGCGCCCCCCGCGCCGC
CGCCGCGGCCTTCCCCATCCCGGGGCGCTCGCCGCCGCCGCCCCGACCGT
GCTCCGGGCGGCCACTACTGATGTCCTCCGCGACCGGGGCCGTCTCCGGC
GAAGAGATTTGCAGAGCCGCGCATATCCTGTGCGCCGACGCGGAGGCGGC
CGAGGCCGCCCTAACCCGGATCAAGGACGGCGAGCAGTTCGGTGACGTCG
CCGCGGACATGAGCTCTTGCCCCTCGAAGGAGAAGGGAGGGGACCTGGGC
TGGTTCAAGAAGGGCCAGATGGTGGCAGAGTTCGAGGCGGCGTGCTTCGA
GAACGATTCGGGCACAATCGTGAAGGTCCAGACGCAGTTCGGGTGGCACG
TGAGCCGCGCATATCCTGTGCGCCGACGCGGAGGCGGCCGAGGCCGCCCT
AACCCGGATCAAGGACGGCGAGCAGTTCGGTGACGTCGCCGCGGACATGA
GCTCTTGCCCCTCGAAGGAGAAGGGAGGGGACCTGGGCTGGTTCAAGAAG
GGCCAGATGGTGGCAGAGTTCGAGGCGGCGTGCTTCGAGAACGATTCGGG
CACAATCGTGAAGGTCCAGACGCAGTTCGGGTGGCACGTGGTGGCGTTGC
TCTCGCGGGCGATCTTGCCGCGGCAGATGACCGTCGAGGAGTTGGGAGAG
ATCCTAGAGCAGCTGAAGAGCGGGGGCAGTGACGTCGAGAGTAAATACCA
GTTCGTCGACGTCCGAGAAGAGGAAGAGCTGGGGAAGGCCAAGCTTGACG
GTGGCGTTGCTCTCGCGGGCGATCTTGCCGCGGCAGATGACCGTCGAGGA
GTTGGGAGAGATCCTAGAGCAGCTGAAGAGCGGGGGCAGTGACGTCGAGA
GTAAATACCAGTTCGTCGACGTCCGAGAAGAGGAAGAGCTGGGGAAGGCC
AAGCTTGACGGATTTGTGAACCTGCCGCTTTCGAAGTTCCCGGAGTGGGG
TGACAAGCTTTCCGGGGAAGGCGCCCTGTTGGACTCGGAGAAGGACACCA
TCGTCATGTGTCATCACGGCATGAGGATTTGTGAACCTGCCGCTTTCGAA
GTTCCCGGAGTGGGGTGACAAGCTTTCCGGGGAAGGCGCCCTGTTGGACT
CGGAGAAGGACACCATCGTCATGTGTCATCACGGCATGAGGTCGAACCAG
ATGGCCCAGCACCTGGCGACGAAGGCCGGCTTCAAGAAGGTGTGGAACGT
GGAGGGCGGCCTTCACGCCTACGCCACCCAGGTCGACACTTCTGTGGGAG
TGTACTGAGTCGAACCAGATGGCCCAGCACCTGGCGACGAAGGCCGGCTT
CAAGAAGGTGTGGAACGTGGAGGGCGGCCTTCACGCCTACGCCACCCAGG
TCGACACTTCTGTGGGAGTGTACTGA
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