mRNA_P-fluviatile_contig1.565.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Match: D8LFM2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM2_ECTSI) HSP 1 Score: 316 bits (809), Expect = 3.260e-91 Identity = 227/328 (69.21%), Postives = 267/328 (81.40%), Query Frame = 2
Query: 284 ERKKDAGVLAATGASGALVGWSLAHSLGLGVDLVGSVTGCLVAVGLLAQEGPVGDATSKVGEFALAAFGVVGAVAASSDVPAKVVGTVGEEFLEVVEFTSAAATKGYMESLPEPHLRLEKEVQKSKKAVKDLEGQVEEVKAALAEAKVQLKKRAENQKVVKAAKATAAELAAAKAVIEEKEALIAQNLKLARKVKDAFDKDLEAAKAETARFREMMESRADMDDNFRLLAEASDTLEERVQEYEARLRELTEENDGIRADYSAEIKSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSAVAESAAALAAEM 1267
+++KDAGVLAATGA+GA+VGWSL HSLGL D++G GCL AVGLLAQEG +G + +K GEFAL AF VV VAAS+DVPAK+ +VGEEFLEVVEFTS A TKGYM+SLPEP +R E ++ +SK+ K+L+ Q+++V AA AEAK QLK+RAENQ++V AAK T AELAAAKA + EK+ IA++L+LARK KDAFD DL+AAKAE RFR+M+E+RADMDD++R LAEASDTLEERVQ+YEARLR L EENDGIRAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EKSA AE+AA LAAEM
Sbjct: 102 DKRKDAGVLAATGATGAIVGWSLGHSLGL--DMIGMFAGCLAAVGLLAQEGTIGQSAAKFGEFALGAFEVVSTVAASTDVPAKMASSVGEEFLEVVEFTSGAMTKGYMDSLPEPVVRYEAQIARSKETAKELKEQLDKVSAAFAEAKEQLKQRAENQRIVNAAKTTVAELAAAKAAVVEKDVAIAKSLQLARKEKDAFDVDLKAAKAEAGRFRDMVETRADMDDDYRALAEASDTLEERVQDYEARLRVLAEENDGIRADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKMGNALDEKSAAAEAAAGLAAEM 427
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Match: A0A6H5L6Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y4_9PHAE) HSP 1 Score: 137 bits (345), Expect = 6.380e-31 Identity = 111/300 (37.00%), Postives = 138/300 (46.00%), Query Frame = 2
Query: 284 ERKKDAGVLAATGASGALVGWSLAHSLGL---------------------------------GVDLVGS-------------------------------------------------------------VTGCLVAVGLLAQEGPVGDATSKVGEFALAAFGVVGAVAASSDVPAKVVGTVGEEFLEVVEFTSAAATK-----------------------------------GYMESLPEPHLRLEKEVQKSKKAVKDLEGQVEEVKAALAEAKVQLKKRAENQKVVKAAKATAAELA 796
+++KDAGVLAATGA+GA+VGWSL HSLGL GV + S GCL AVGLLAQEG +G T+KVGEFAL AF VV VA S++VPAKV +VGEEFLEVVEFTS A TK GYM+SLP+P +R + ++ +SK+ +L+ Q+++V AA AEAK QLK+RAENQ++V AAK T AELA
Sbjct: 104 DKRKDAGVLAATGATGAIVGWSLGHSLGLDMMGMFAGGLPRKEGVRFSKSSTDIRRREEGLGGVQVATSRRDHQDVRKGLSRRKRTYLRTSEEILTFVDRASYAARTDTEKHRSASSCLAHPAPPPIRVFFAGCLAAVGLLAQEGTIGQTTAKVGEFALGAFEVVSTVATSTNVPAKVASSVGEEFLEVVEFTSGAVTKVGGRSLKPLFGSSSHIFTQHFFHANSGTPGGTEKKGYMDSLPDPVVRYKAQIARSKQTAAELKEQLDKVSAAFAEAKKQLKQRAENQRIVDAAKTTVAELA 403
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Match: A0A6H5L7P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P9_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.800e-26 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 2
Query: 797 AAKAVIEEKEALIAQNLKLARKVKDAFDKDLEAAKAETARFREMMESRADMDDNFRLLAEASDTLEERVQEYEARLRELTEENDGIRAD 1063
AAKA + EK+A IA++L+LARK KDAFD DL+AA AE RFR+M+E+RADMDD +R LAEASDTL+ERVQ+YEARLR L EENDGIRAD
Sbjct: 27 AAKAAVVEKDAAIAKSLQLARKEKDAFDMDLKAANAEAGRFRDMVETRADMDDEYRALAEASDTLDERVQDYEARLRVLAEENDGIRAD 115
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Match: A0A6H5L6A0_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A0_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.350e-10 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2
Query: 1898 GPLSKEGLMKSTVKDLRERCKAAGVPTSGKKSDLVDRLIEASL 2026
G LSKEGLMK TVKDLRERCKAAGVPTSG+K+D+VDRL+++ L
Sbjct: 148 GGLSKEGLMKLTVKDLRERCKAAGVPTSGRKADIVDRLLDSGL 190
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Match: A0A836C7Q9_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q9_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.760e-9 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 2
Query: 296 DAGVLAATGASGALVGWSLAHSLGLGVDLVGSVTGCLVAVGLLAQEGPVGDATSKVGEFALAAFGVVGAVAASSDVPAKVVGTVGEEFLEVVEFTSAAATKGYMESLPEPHLRLEKEV 649
D G AATGA+GA +GW+LA S+ L +DL G+V G ++ +G G + VG+ A V S + K++G VG E ++V+E TSAA KG S P P +E+++
Sbjct: 87 DVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKP-PETEVERQL 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.565.1 >prot_P-fluviatile_contig1.565.1 ID=prot_P-fluviatile_contig1.565.1|Name=mRNA_P-fluviatile_contig1.565.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=614bp MVGQAGGAEEGDGPEGEGGRGEGGQDDAGERKKDAGVLAATGASGALVGWback to top mRNA from alignment at P-fluviatile_contig1:6084098..6095607+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.565.1 ID=mRNA_P-fluviatile_contig1.565.1|Name=mRNA_P-fluviatile_contig1.565.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11510bp|location=Sequence derived from alignment at P-fluviatile_contig1:6084098..6095607+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:6084098..6095607+ >mRNA_P-fluviatile_contig1.565.1 ID=mRNA_P-fluviatile_contig1.565.1|Name=mRNA_P-fluviatile_contig1.565.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3684bp|location=Sequence derived from alignment at P-fluviatile_contig1:6084098..6095607+ (Porterinema fluviatile SAG_2381)back to top |