mRNA_P-fluviatile_contig1.55.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: D7FJH8_ECTSI (Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJH8_ECTSI) HSP 1 Score: 876 bits (2264), Expect = 3.980e-300 Identity = 533/869 (61.33%), Postives = 618/869 (71.12%), Query Frame = 2
Query: 254 MKWPSKGKRVKG--KKKTNGSSSGRASEGTPTTAV---------TPSNN---TLGLGTIRLGLVRSKSASMLLSTPTPTTARRRLISELL--DADSDEEDEKPVAASPALRSMISNRKSST----------NDVIKDLNEEKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRRPRIHRERLHLGASIKMQAWFRMVSVMHVYNPIFEERRASARRISRAYRRWSLVRNRQRAATALQALWRGGSGRALASRRRITVAKERAAEAFARXXXXXXXXXXXXXDLERRRATAAAITLQAWARGVETRKAVSSALEARGLPLLLAEQRRRRRASARPSLKGCQTGGVTSPRTSVASSVRFSEDPPNCSGGSEGDGWNMSFAPA---------SGWFDKVFSGMSFGLPDRPKKDARRKQSAAAMVIQRWQRQLRWSRVEAVRAREELARRRWAVDRLHAAYAGRWQFAVAVRRERRRXXXXXXXXXXXXXRLAAEGFGGMLGGLWARLKRFGSGKSRGLDHDGEEEDGVDYALRAWLTRRKC---QEDKAEEDDADCCDVVGEGVLASEIDAWKVSYLSDHVFGVPGIGDAQEKRALALAKMGDEATSPTAYLACWSPPEKALTPGKVVAMFSVLLTVAYEVVLPNAAAIG 2746
MKWP KGK+ G KKK GS + TPT + TP + +LGLGT R+ S+S + TPTPT+ RR+ IS+LL D D + ED V ASPALR++ISNRKS + + + +EEKAVFACHLNAHL+GDPF+TH++PLDP GAD +SFKDGVLMCR+VCLAIPGSIAD+ +NTP+ EPLSLY++NENLNVAL+AAE G+QVVNIGATDIIQGRPASILGLTWQLIR+HLLAQINLKGCPDLIHLME GE+KE FF LPVE+VLLRWFNHHLRWGGSERRV+NF DDLADG CY+TLIKELNDK K EEV +EEDAKRAQFRRACLVISGAEGIG+APLIRANHITGKAHLYNIAFVAQLLNRRPRIHRE LHL AS+ MQAWFRMVSVM NP+ EERR SA+ ++RA RRW RNR RAATALQALWRGG GRA+A+ RR AK A +A A+XXXXXXXXXXXXX + TAAA ++QA ARGV TR+AVS ALE+RGLPLLLAEQRRR S +LKG + SPRTS ASS+R SED P GG + S PA WFD+VFSG+SFG+PDR K+ +R +AAAMVIQRWQR++ +RVE RAR+E+A RRWAVD+LH+AYA RW+F VA RRERR+ R + G L GLWA + S ++ + WL RR+ Q+ EE DADCCDV GE VLASEIDAWK L + VFG G+G AQE+RA AL + D+A WS PEKAL+P KV AM SVLLTVA+E VLPNAAAIG
Sbjct: 1 MKWP-KGKKKNGSAKKKKVGSQ-----QPTPTKSAAADQRSQVSTPGGSAGGSLGLGTXXXXXXRADSSSAPMCTPTPTS-RRQSISDLLGPDTDGEGEDLSTVTASPALRNIISNRKSLSGSFDTKRGKGDSITTYTSEEKAVFACHLNAHLVGDPFLTHLMPLDPGGADLFDSFKDGVLMCRIVCLAIPGSIADTNVNTPTNDEPLSLYKANENLNVALEAAEKHGLQVVNIGATDIIQGRPASILGLTWQLIRIHLLAQINLKGCPDLIHLMEGGESKEAFFELPVEEVLLRWFNHHLRWGGSERRVANFGDDLADGRCYVTLIKELNDKFKGEEVDPTEEEDAKRAQFRRACLVISGAEGIGLAPLIRANHITGKAHLYNIAFVAQLLNRRPRIHRESLHLDASVTMQAWFRMVSVMRRTNPVLEERRRSAQTLTRACRRWMTARNRLRAATALQALWRGGEGRAIAANRRFLAAKRLADQAEAKXXXXXXXXXXXXXXXXXXKETAAARSMQALARGVATRQAVSEALESRGLPLLLAEQRRR--GSYGSNLKGSKVMQGISPRTSAASSIRMSEDSPAGEGGQDHSFGGGSITPAYDGEEPQGSPSWFDRVFSGISFGMPDRGNKNPKRTAAAAAMVIQRWQRRVAAARVETARARQEVANRRWAVDKLHSAYANRWRFEVAARRERRQKWEEEAR------RNIGDKGGRGLRGLWADITSLASSDDF-------------FSFKGWLARRQARQLQQKDMEEADADCCDVAGEHVLASEIDAWK---LPNQVFGGAGMGWAQEERARALCSIKDDAA--------WSSPEKALSPVKVFAMVSVLLTVAFEGVLPNAAAIG 830
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A834U037_9FABA (Fimbrin-1-like n=1 Tax=Senna tora TaxID=362788 RepID=A0A834U037_9FABA) HSP 1 Score: 195 bits (495), Expect = 4.090e-48 Identity = 110/269 (40.89%), Postives = 161/269 (59.85%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K++T ++ ++E EKA + H+N++L DPF+ +PLDP+ D + KDGVL+C+L+ +A+PG+I + INT + L+L+ NEN + L +A+A G VVNIG D+++GRP +LGL Q+I++ LLA +NLK P L+ L+E+G+ EE LP E VLL+W N HL+ GG +R V NFS D+ DG Y L+ L + E P D K RA LVI AE +G + I + N+AFVAQ+ + R
Sbjct: 110 KATTTTLLHTISESEKASYVAHINSYLGDDPFLQRYLPLDPSTNDLFDHAKDGVLLCKLINVAVPGTIDERAINTKT---VLNLWERNENHTLCLNSAKAIGCSVVNIGTQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVEDGQEVEELLSLPPEKVLLKWMNFHLQRGGYDRTVKNFSSDVKDGRAYAYLLNIL-----APEHCSPFTLDTKDP-IERAKLVIDHAERMGCKRYLTPKDIVDGSSNLNLAFVAQIFHYR 369
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A8J5HPC9_ZINOF (Uncharacterized protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HPC9_ZINOF) HSP 1 Score: 184 bits (466), Expect = 9.670e-48 Identity = 104/269 (38.66%), Postives = 157/269 (58.36%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K++T ++ ++E EKA + H+N +L DPF+ +P+DP D E KDGVL+C+L+ +A+PG+I + INT L+L+ NENL + L +A+A G VVNIG D+ +GRP +LGL Q+I++ LLA +NLK P+L+ L+++G+ EE LP E +LLRW N L+ GG R ++NFS D+ D + Y L+ + L E P + K RA LV+ A+ IG + I + N+AFVA + +R
Sbjct: 58 KAATTTLLHTISESEKASYVSHINNYLGDDPFLKKYLPIDPMTNDLFEIAKDGVLLCKLINVAVPGTIDERVINTK---RVLNLWEKNENLMLFLNSAKAIGCTVVNIGTQDLAEGRPHLVLGLISQIIKIQLLADVNLKKTPELVELVDDGKDVEELMSLPPEKILLRWMNFQLKKGGFRRLITNFSSDVKDSEAYACLL----NVLAPEHSRKPYPKTVKDL-LDRAKLVLEHADRIGCKRYLTPKDIVDGSPNLNLAFVAHIFQKR 318
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A137P268_CONC2 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P268_CONC2) HSP 1 Score: 192 bits (487), Expect = 1.990e-47 Identity = 107/279 (38.35%), Postives = 162/279 (58.06%), Query Frame = 2
Query: 530 ALRSMISNRKSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRRP 1363
A + K S D +NE EK FA H+N L+GDP + +P+DP + KDG+++ +L+ A +I + +N G L+ ++ EN N+ + +A+A G VVNIG+ D+I+GR ILGL WQ+I++ LLA+I++K P+L L+E+GET E+F LP E +LLRWFN+HL+ G +RRV+NFS D+ DG Y L+ +L+ S +A KE D ++RA +V+ A+ +G + + G N+AFVA L N P
Sbjct: 101 AFNQKVITVKGSNQDTAHSINEDEKFEFATHINQALLGDPDLGDRLPIDPNSMQLFDECKDGLVLSKLINTAAADTIDERVLNV---GARLNAFKMTENNNLVINSAKAIGCSVVNIGSKDLIEGREHLILGLIWQIIKIGLLAKIDIKYHPELYRLLEDGETLEDFLKLPAEHILLRWFNYHLKNAGWDRRVTNFSKDVKDGQNYTVLLNQLSPNQCS--LAPLKENDL----YQRAEMVLQNADTLGCRKYLSPKTLVGGNPKLNLAFVAHLFNTHP 370
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: UPI0010A2AC78 (fimbrin-1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2AC78) HSP 1 Score: 192 bits (488), Expect = 2.890e-47 Identity = 106/269 (39.41%), Postives = 163/269 (60.59%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K++T ++ ++E EKA + H+N++L DPF++ +PLDP +D ++ KDGVL+C+L+ +A+PG+I + IN + L+L+ NEN + L +A+A G VVNIG D+++GRP +LGL Q+I++ LLA +NLK P L+ L+E+ + EE LP E VLL+W N HL+ GG ++ V NFS D+ DG Y L+ L + E P D K +RA LV+ AE +G + I + N+AFVAQ+ ++R
Sbjct: 110 KATTTTLLHTISESEKASYVAHINSYLGDDPFLSQYLPLDPATSDLIDLAKDGVLLCKLINVAVPGTIDERAINAK---KVLNLWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVEDSQEVEELLSLPPEKVLLKWMNFHLQRGGYDKYVKNFSSDVKDGRAYAYLLNVL-----APEHCNPSTLDTKDP-IQRAELVLDHAERMGCRRYLTPKDIVDGSSNLNLAFVAQIFHQR 369
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A6A4PYL2_LUPAL (Putative dystrophin n=8 Tax=Lupinus TaxID=3869 RepID=A0A6A4PYL2_LUPAL) HSP 1 Score: 192 bits (487), Expect = 3.620e-47 Identity = 106/269 (39.41%), Postives = 162/269 (60.22%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K S ++ +++ E+A + H+N++L DPF+ +PLDP D + KDGVL+C+L+ +A+PG+I + INT LSL++ N+N + L +A+A G VVNIGA D+++GRP +LGL Q+I++ LLA +NLK P L+ L+++ + EE L E VLL+W N H++ GG ++ V NFS D+ DG+ Y L+ L + E + P D K A + RA LV+ AE +G + A I + N+AFVAQL + R
Sbjct: 110 KESVTTLLHTISDSEQACYVAHINSYLGDDPFLKQFLPLDPATNDLFDLVKDGVLLCKLINVAVPGTIDERAINTTRN---LSLWQRNDNHTLCLNSAKAIGCTVVNIGAQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVDDSQDIEELLSLSPEKVLLKWMNFHIQRGGYQKTVKNFSSDVKDGEAYAYLLNVL-----APEHSSPATLDTKDA-YERANLVLDHAERMGCKRYLSARDIREGSSNLNLAFVAQLFHHR 369
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A1J3IPI9_NOCCA (Fimbrin-1 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IPI9_NOCCA) HSP 1 Score: 189 bits (481), Expect = 4.110e-47 Identity = 110/269 (40.89%), Postives = 155/269 (57.62%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K+ST ++ +N+ EKA F H+N +L DPF+ H +PLDP D E KDGVL+C+L+ +A+PG+I + INT P + EN + L +A+A G VVNIG D+ + RP +LGL QLI++ LLA +NLK P L+ L+E+ + EE LP E VLL+W N HL+ GG ++ VSNFS DL D Y L+ L + E P DAK +A LV++ AE + + A I + N+AFVAQ+ + R
Sbjct: 106 KASTTTLLHTINQSEKASFVQHINRYLGDDPFLKHFLPLDPDSNDLYELVKDGVLVCKLINVAVPGTIDERAINTKKVLNP---WERTENHTLCLNSAKAVGCTVVNIGTQDLAEARPHLVLGLISQLIKIQLLADLNLKKTPQLVELVEDSDDVEELLRLPPEKVLLKWMNFHLKKGGYKKTVSNFSSDLKDAQAYSYLLNVL-----APEHCDPDTLDAKDP-LEKAELVLNHAERMNCKRYLTAEEIVEGSPTLNLAFVAQIFHER 365
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A0D2U007_CAPO3 (Fimbrin n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U007_CAPO3) HSP 1 Score: 189 bits (481), Expect = 6.850e-47 Identity = 103/258 (39.92%), Postives = 150/258 (58.14%), Query Frame = 2
Query: 590 NEEKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRRP 1363
+EEK F +N L D + +PL+ ++ DG+L+C+LV A+ +I + IN LS+Y+++EN +AL +A+A G +VNIGATD+ +G P +LGL WQ+IR+ L AQINL CP L+ L+E GET E+ LP + +LLRWFN+HLR G RRV+NFS D+ D +CY L+K++ + + + E D ++ RA V+ AE + +RA IT N+AFVA L N P
Sbjct: 114 DEEKVAFVDWINHVLGSDADLKSRLPLNENDDSLFKAVGDGILLCKLVNSAVKETIDERAINKTK----LSVYKTHENQTLALNSAKAIGCNIVNIGATDMCEGIPTLVLGLMWQVIRIGLFAQINLANCPGLVRLLEPGETLEDLMALPADQILLRWFNYHLREAGHPRRVTNFSGDIKDSECYTILLKQIAPRQLGIDTSALNERDLEK----RAGKVLDNAEKMDCRKFVRARDITSGNPKLNLAFVANLFNMYP 363
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: A0A151SXH6_CAJCA (Fimbrin-1 n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A151SXH6_CAJCA) HSP 1 Score: 189 bits (481), Expect = 2.400e-46 Identity = 107/269 (39.78%), Postives = 155/269 (57.62%), Query Frame = 2
Query: 557 KSSTNDVIKDLNE-EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
K S ++ ++E EKA + H+N++L DPF+ H +PLDP D + KDG+L+C+L+ +A+PG+I + IN LSL+ NEN + L +A+A G VVNIG D+++GRP +LGL Q+I++ LLA +NLK P L+ L+++ E EE L E VLL+W N HL+ G E+ V NFS D+ DG+ Y L+ L + E P D K A RA LV+ AE +G + + N+AFVAQL + R
Sbjct: 110 KDSITTLLHTISESEKACYVAHINSYLGDDPFLKHYLPLDPPTNDIFDLAKDGILLCKLINVAVPGTIDERAINAK---RKLSLWEVNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVDDSEEIEELLNLSPEKVLLKWMNFHLQRAGYEKTVRNFSSDVKDGEAYAYLLNVL-----APEHCSPATLDTKNAN-ERANLVLDHAERMGCKRYLSPRDVVEGTSNLNLAFVAQLFHHR 369
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Match: G7K4B3_MEDTR (Actin-binding calponin-like (CH) domain protein n=5 Tax=IRL clade TaxID=2233839 RepID=G7K4B3_MEDTR) HSP 1 Score: 189 bits (480), Expect = 3.130e-46 Identity = 111/288 (38.54%), Postives = 160/288 (55.56%), Query Frame = 2
Query: 533 LRSMISNRKSSTNDVIKDLNE------------EKAVFACHLNAHLMGDPFVTHVVPLDPTGADFLESFKDGVLMCRLVCLAIPGSIADSEINTPSGGEPLSLYRSNENLNVALKAAEAAGVQVVNIGATDIIQGRPASILGLTWQLIRVHLLAQINLKGCPDLIHLMEEGETKEEFFMLPVEDVLLRWFNHHLRWGGSERRVSNFSDDLADGDCYLTLIKELNDKLKSEEVALPKEEDAKRAQFRRACLVISGAEGIGVAPLIRANHITGKAHLYNIAFVAQLLNRR 1360
LRS+ + ++ LNE EK + H+N++L DPF++ +PLDP D + KDG+L+C+L+ +A+PG+I + INT LSL+ NEN + L +A+A G VVNIGA D++ GRP +LGL Q+I++ LLA ++LK P L+ L+++ + EE L + VLLRW N HL+ GG ++ V NFS DL D + Y L+ L + E P D K A RA LV+ AE +G + A IT N+AFVAQL + R
Sbjct: 91 LRSLATKKQGGLKHSSSFLNESITTLLHTISGSEKGFYVAHINSYLGDDPFLSQYLPLDPATNDLFDLSKDGILLCKLINVAVPGTIDERAINTKRN---LSLWERNENHTLCLNSAKAIGCTVVNIGAQDLVDGRPHLVLGLISQIIKIQLLADLSLKKTPQLVELVDDSQDIEELLNLSPDKVLLRWMNFHLQRGGYQKTVKNFSSDLKDAEAYAYLLNVL-----APEHCSPATLDTKDAN-ERANLVLEHAERMGCKRYLSARDITEGTSNLNLAFVAQLFHHR 369 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.55.1 >prot_P-fluviatile_contig1.55.1 ID=prot_P-fluviatile_contig1.55.1|Name=mRNA_P-fluviatile_contig1.55.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=833bp MKWPSKGKRVKGKKKTNGSSSGRASEGTPTTAVTPSNNTLGLGTIRLGLVback to top mRNA from alignment at P-fluviatile_contig1:861513..874867- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.55.1 ID=mRNA_P-fluviatile_contig1.55.1|Name=mRNA_P-fluviatile_contig1.55.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13355bp|location=Sequence derived from alignment at P-fluviatile_contig1:861513..874867- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:861513..874867- >mRNA_P-fluviatile_contig1.55.1 ID=mRNA_P-fluviatile_contig1.55.1|Name=mRNA_P-fluviatile_contig1.55.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4998bp|location=Sequence derived from alignment at P-fluviatile_contig1:861513..874867- (Porterinema fluviatile SAG_2381)back to top |