mRNA_P-fluviatile_contig1.541.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.541.1
Unique NamemRNA_P-fluviatile_contig1.541.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 2.810e-161
Identity = 258/359 (71.87%), Postives = 283/359 (78.83%), Query Frame = 1
Query:  253 GNQTDKAKERNERERLRKDRQRNMLYSSSVDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPFEKARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTPTSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISAQNEPGLE----------------------GEAAEETGSGGEKMAKGRGGAPGGTLAMSTGKKSDKTAK-ITRAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAEPESTSRESSVLDELGLLVI 1260
            G Q DKAKERNER RLRKDR RN LYSSS DDR+FEAQVEQ+GCKIKFI+GDGNCLFRSLADQLEGRS+DHSS+R KVMDHL+RNR+VFEPYMEDDE+F DYL RMRG+ EWGGNQELVAASQLYK NVVVHQFKAPRFFIP EKAR TIHLSYHGEHHYNSVRAIGDE +GPA  I LQTPTS+G      SPWP+EEAAVAR CPWA PP +VAALETTGGR +DAIELLI+A+NEPGLE                      GE  +E G  GE   KGRGG           KKS+K AK + RA+DCPCGSGLKYKKCCRKKDAAIARGQI  PAEP++ S +SSV+D+LG LVI
Sbjct:   13 GQQADKAKERNERARLRKDRMRNSLYSSSADDRDFEAQVEQIGCKIKFIQGDGNCLFRSLADQLEGRSEDHSSVRAKVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVVHQFKAPRFFIPCEKARRTIHLSYHGEHHYNSVRAIGDEANGPALPITLQTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLEEGVDNTAGDKKGTGKLEDGGDSGEKPQENGRPGE--GKGRGGG--------VAKKSEKAAKKVARASDCPCGSGLKYKKCCRKKDAAIARGQIDAPAEPDA-SGDSSVVDDLGSLVI 360          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A6V1PSA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSA8_HETAK)

HSP 1 Score: 213 bits (543), Expect = 4.700e-58
Identity = 140/331 (42.30%), Postives = 180/331 (54.38%), Query Frame = 1
Query:  343 DDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPFEKAR----LTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQ--TPTSRGAPRAEGSPWP------------QEEAAVARIC-PWAKPPEVVAALETTGGRSEDAIELLISAQNEPGLEGEAAEETGSGGEKMAKGRGGAPG-----------------------GTLAMSTGKK------------SDKTAK---ITRAADCPCGSGLKYKKCCRKKD 1164
            +DR+F  Q+  +GC+IKFI GDGNC+FRS+ADQ+EG  ++H   R ++MDH+E + D+F  +MEDDE F  YL+RMR D +WGG+QEL AASQL++  ++VHQ++APR  I FE A       +HLSYHGE HYNSVRA+GD G GP   I L+   P S+   RA G P P             E+  + R+  PWA    V  A+    G    AIEL++S   E  LE E      S  E   +G  GA                         G  + ST K             S +T K   +TR A CPCGSGLKYKKCCRK+D
Sbjct:   52 EDRKFALQLASIGCRIKFISGDGNCMFRSIADQIEGNPENHRDFRNRIMDHIEAHGDLFALFMEDDEPFAGYLSRMRADRQWGGHQELYAASQLFRTTILVHQYQAPRLEISFEGADGRRPHPLHLSYHGESHYNSVRAVGDPGGGPPLPINLRQSAPPSK---RAGGGPAPGGGEGKQQGPGTAEDWELVRLSVPWADGALVERAMARARGEGIQAIELIVS--GEVYLEEEDQSPHTSQSESTGEGNTGADSKESVVHSSQASNQECNNLNPEEEGDQSSSTSKADVCENGGDESTLSGRTIKNNAVTRGAKCPCGSGLKYKKCCRKRD 377          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.160e-56
Identity = 130/328 (39.63%), Postives = 179/328 (54.57%), Query Frame = 1
Query:  334 SSVDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPF---EKARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTP---------TSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISA--QNEPGLEGE---AAEETGS----GGEKMAKGRGGAP--------GGTLAMSTGKKSDKTAKITRAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAEPESTSRESS 1230
            ++ +D  F+ Q+  +G +I  I GDGNC+FRS++DQL G   +H   R  ++D +   R+ FEP++EDDESFDDY+ RM  DGEWGG+QEL AA+Q Y  N+V+HQ  APR  +     E A  T+HLSYHGE HYNSVRA  D G GPAQ IA+  P         T RG+  AE     +++  ++   PW     +   L    G ++ A+ELL+S     +P  EG+    ++  G+    GGE  A   G A         GG    ++GK   K+ K  RA  CPCGSG KYKKCC K++      +    AE +     S+
Sbjct:   64 TAAEDLNFDGQMAAVGLRIVSITGDGNCMFRSISDQLCGVQANHWEYRKHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRIS--VPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGGGKLSASGKSGQKSGKTARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSN 389          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A7S2WN45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN45_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.970e-43
Identity = 111/284 (39.08%), Postives = 150/284 (52.82%), Query Frame = 1
Query:  466 SSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPF---EKARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTP---------TSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISA--QNEPGLEGE---AAEETGS----GGEKMAKGRGGAP--------GGTLAMSTGKKSDKTAKITRAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAEPESTSRESS 1230
            S +   ++D +   R+ FEP++EDDESFDDY+ RM  DGEWGG+QEL AA+Q Y  N+V+HQ  APR  +     E A  T+HLSYHGE HYNSVRA  D G GPAQ IA+  P         T RG+  AE     +++  ++   PW     +   L    G ++ A+ELL+S     +P  EG+    ++  G+    GGE  A   G A         GG    ++GK   K+ K  RA  CPCGSG KYKKCC K++      +    AE +     S+
Sbjct:    9 SPLWQHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRIS--VPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGGGKLSASGKSGQKSGKTARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSN 290          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: W7U4L0_9STRA (SEC-C motif-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4L0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.850e-40
Identity = 99/275 (36.00%), Postives = 145/275 (52.73%), Query Frame = 1
Query:  343 DDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPFEKARLTIHLSYHGEHHYNSVRAIGDE---GDGPAQQIALQTPTSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISAQNEPGLEGEAAEETGSGGEKMAKGRGGAPGGTLAMSTGKKSDKTAKITRAADCPCGSGLKYKKCCRK 1158
            +++ F   VE LG +I  ++ DGNCLFR+LADQL GR +DH  IR  V+D +E +   F P++EDDE F DY+ RMR +GEWGG QE+ AAS+ +  NVV+HQ   PRF I F+ +  TIHLS+HG  HYNS+RA  D    GD PA+     T              P   +  + +  ++  P +  A     G+S    E+      +  L  +  +E     ++          G++     + +++   + R   CPC SG K++KCCRK
Sbjct:   49 EEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGD-PAKPFLALTAL------------PLSTSKTSTLTSFSSSPSL--APHRREGKSIPGAEIKERGDEDDELRRKTRKEMADISDESD--------GSIDRDEPRATEEKV-LKRGGQCPCRSGKKWRKCCRK 299          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A8J2WFC2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WFC2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 7.270e-38
Identity = 102/289 (35.29%), Postives = 137/289 (47.40%), Query Frame = 1
Query:  343 DDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPFE--KARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTPTSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISAQNEPGLEGEAAEETGSGGEKMAKGRGGAPGGTLAMSTGKKSDKTAKITRAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAE 1203
            +D+ F AQ+   G ++  ++ DGNCLFR+LADQ+EG ++ H   R +++  + R+ + F+ ++EDDE +DDYLAR+  DGEWGGN ELVAA+ L   NVVVHQ +AP+F I  +   A  T+HLSYHGE HYNSVR   D    P+  +         APR   SP P E        P  +PP+ + A +   G                                                                CPCGSG +YKKCCR  D A AR +   P E
Sbjct:   44 EDKRFAAQLAAAGLRVNEVDADGNCLFRALADQVEGSAKHHGKYRDEIVAFMRRDEERFKWFVEDDEDWDDYLARLGRDGEWGGNLELVAAANLRSVNVVVHQLEAPKFEICADDNSATRTVHLSYHGEAHYNSVRLKDDYSAEPSSGLPH---IGAEAPR-PASPEPVE-------APEDRPPKPLKASKAPKG---------------------------------------------------------------PCPCGSGKRYKKCCRAADLARARQKAQAPRE 258          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A2I0J5W1_PUNGR (OTU domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J5W1_PUNGR)

HSP 1 Score: 149 bits (375), Expect = 1.280e-37
Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 1
Query:  328 YSSSVDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIP-FEK-ARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQ 792
            +    D  +F AQV+ LG KI  +  DGNC FR+LADQLEG   +H   R+ V+ ++ +NR++FEP++ED+  F++Y   M  DG W G+ EL AAS + ++N+ +H+  +PR++I  FEK     IHLSYH E HYNSVR   D GDGPA+ + ++
Sbjct:   21 HGKQADMTQFRAQVDALGLKIVQVTADGNCFFRALADQLEGNEDEHGKYRSMVVQYILKNREMFEPFIEDEVPFEEYCQTMENDGTWAGHMELQAASLVTRSNICIHRSMSPRWYIRNFEKPGSRMIHLSYHDEEHYNSVRLREDHGDGPARPVLIK 177          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A218W1U3_PUNGR (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 isoform X1 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218W1U3_PUNGR)

HSP 1 Score: 154 bits (388), Expect = 7.670e-37
Identity = 112/316 (35.44%), Postives = 163/316 (51.58%), Query Frame = 1
Query:  328 YSSSVDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIP-FEK-ARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQ-----TPTSRGAPRA----EGSPWPQ--EEAAVARI-----CPWAKPPEVVAALETTGGRSEDAIELLISAQNEPGLEGEAAEETGSGGEKMAKGRGGAPGGTLAMSTGKKSDKTAK-----------------------ITRAADCPCGSGLKYKKCC 1152
            +    D  +F AQV+ LG KI  +  DGNC FR+LADQLEG   +H   R+ V+ ++ +NR++FEP++ED+  F++Y   M  DG W G+ EL AAS + ++N+ +H+  +PR++I  FEK     IHLSYH E HYNSVR   D GDGPA+ + ++     + +SR A  A    +G P     +  ++  +     C  A+  E V  LE   G  + AIE L++ Q   G+E E +EE  S   +     G    G    S  + +++T K                       I+R   CPCGS  KYK CC
Sbjct:   53 HGKQADMTQFRAQVDALGLKIVQVTADGNCFFRALADQLEGNEDEHGKYRSMVVQYILKNREMFEPFIEDEVPFEEYCQTMENDGTWAGHMELQAASLVTRSNICIHRSMSPRWYIRNFEKPGSRMIHLSYHDEEHYNSVRLREDHGDGPARPVLIKADSDLSSSSRQAKSASNNFKGGPGKNAVDTGSIKLVMAGTGCENAEKVEQV--LEQMDGDVDAAIEYLVAEQ---GME-EFSEEISSPSCQPETSYGDGANGNSKQSKEEIANETIKQDPSSDNFKRPHKDSNSQPDGKKISRNKACPCGSKKKYKSCC 362          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: A0A7S3JRN2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRN2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.110e-36
Identity = 115/323 (35.60%), Postives = 164/323 (50.77%), Query Frame = 1
Query:  331 SSSVDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRS-QDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIPFEKARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTPTSRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLISAQN-EPGLEGEAAEE---TGSGGEK-----------MAKGRGGAPGGTLAMSTGKKSDKTAKITRAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAEPESTSRESSVLDELGL 1251
            + S +D  F  Q+  +G +I  ++ DGNCLFR+L+DQL   S Q  + +R  +++    N D   P++EDDE +D+YL RM  DGEWGGN EL AASQ+Y+ N+V+HQ +APR  I       T+HLSYHGE HYNSV++     DG AQ            P  +G+     E  ++R CP A   E+   LET     +DA+  L   +  + G+  E  +E   T    +K           + K +       L+ ST   +++     R + CPCGSG  YKKCCR  D    R  +   A P ++  E S+L    L
Sbjct:   39 NGSNEDAAFRTQLMTIGLEIIVVDSDGNCLFRALSDQLYCDSGQKWNQVRQSIVEFERMNEDAIRPFVEDDEPWDEYLERMARDGEWGGNLELYAASQMYRCNIVIHQLQAPRLEILCPNVSRTLHLSYHGESHYNSVKST----DG-AQ-----------LPNIDGTAQDSLEKKLSRACPRATIAEINRTLETHDC-FDDALAFLFELRGKDDGITDEHTQEENHTTPSADKFHHVDQNVSSTIKKKKIKXXXKNLSTST---TEENQPPKRGSACPCGSGKTYKKCCRPTDLRKKRLLVNNNA-PTTSVDEGSLLQSTPL 340          
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Match: UPI00192F004D (LOW QUALITY PROTEIN: OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192F004D)

HSP 1 Score: 148 bits (373), Expect = 1.400e-36
Identity = 72/154 (46.75%), Postives = 107/154 (69.48%), Query Frame = 1
Query:  340 VDDREFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLERNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQFKAPRFFIP-FEK--ARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQ 792
             D+ +F AQ++ LG KI  +  DGNC FR+LADQLEG  ++H   R+ V+ ++ +NR++FEP++EDD  F++Y   M  DG W G+ EL AAS + ++N+ +H+  +PR++I  F++  AR+ IHLSYH E HYNSVR   D GDGPA+ I ++
Sbjct:   30 ADNTQFRAQLDALGLKIVQVTADGNCFFRALADQLEGNEEEHGKYRSMVVQYILKNREMFEPFIEDDAPFEEYCKTMDNDGTWAGHMELQAASLVTRSNIXIHRNMSPRWYIRNFDQPGARM-IHLSYHDEEHYNSVRLKEDTGDGPARPITIK 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGR1_ECTSI2.810e-16171.87OTU domain-containing protein, putative n=1 Tax=Ec... [more]
A0A6V1PSA8_HETAK4.700e-5842.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WLR9_9STRA2.160e-5639.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WN45_9STRA5.970e-4339.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U4L0_9STRA8.850e-4036.00SEC-C motif-containing protein n=1 Tax=Nannochloro... [more]
A0A8J2WFC2_9STRA7.270e-3835.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2I0J5W1_PUNGR1.280e-3745.22OTU domain-containing protein n=1 Tax=Punica grana... [more]
A0A218W1U3_PUNGR7.670e-3735.44OVARIAN TUMOR DOMAIN-containing deubiquitinating e... [more]
A0A7S3JRN2_9STRA1.110e-3635.60Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
UPI00192F004D1.400e-3646.75LOW QUALITY PROTEIN: OVARIAN TUMOR DOMAIN-containi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5843077..5848454 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score485.7
Seed ortholog evalue1.8e-134
Seed eggNOG ortholog2880.D7FGR1
Preferred nameotud3
KEGG koko:K13717
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsKOG2605@1,KOG2605@2759
EC3.4.19.12
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSEC-C motif
Ec32 orthologEc-04_001190.1
Exons5
Model size2403
Cds size1062
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815350.0508292-UTR-P-fluviatile_contig1:5843076..58442161622815350.0508292-UTR-P-fluviatile_contig1:5843076..5844216Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5843077..5844216 -
1693561564.0963454-UTR-P-fluviatile_contig1:5843076..58442161693561564.0963454-UTR-P-fluviatile_contig1:5843076..5844216Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5843077..5844216 -
1622815350.1059525-UTR-P-fluviatile_contig1:5848253..58484541622815350.1059525-UTR-P-fluviatile_contig1:5848253..5848454Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5848254..5848454 -
1693561564.5879738-UTR-P-fluviatile_contig1:5848253..58484541693561564.5879738-UTR-P-fluviatile_contig1:5848253..5848454Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5848254..5848454 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815350.060304-CDS-P-fluviatile_contig1:5844216..58446531622815350.060304-CDS-P-fluviatile_contig1:5844216..5844653Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5844217..5844653 -
1693561564.5188184-CDS-P-fluviatile_contig1:5844216..58446531693561564.5188184-CDS-P-fluviatile_contig1:5844216..5844653Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5844217..5844653 -
1622815350.0698955-CDS-P-fluviatile_contig1:5844954..58451501622815350.0698955-CDS-P-fluviatile_contig1:5844954..5845150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5844955..5845150 -
1693561564.5321546-CDS-P-fluviatile_contig1:5844954..58451501693561564.5321546-CDS-P-fluviatile_contig1:5844954..5845150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5844955..5845150 -
1622815350.0795777-CDS-P-fluviatile_contig1:5845450..58455971622815350.0795777-CDS-P-fluviatile_contig1:5845450..5845597Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5845451..5845597 -
1693561564.5415137-CDS-P-fluviatile_contig1:5845450..58455971693561564.5415137-CDS-P-fluviatile_contig1:5845450..5845597Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5845451..5845597 -
1622815350.087692-CDS-P-fluviatile_contig1:5845743..58458601622815350.087692-CDS-P-fluviatile_contig1:5845743..5845860Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5845744..5845860 -
1693561564.5512445-CDS-P-fluviatile_contig1:5845743..58458601693561564.5512445-CDS-P-fluviatile_contig1:5845743..5845860Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5845744..5845860 -
1622815350.0960145-CDS-P-fluviatile_contig1:5848088..58482531622815350.0960145-CDS-P-fluviatile_contig1:5848088..5848253Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5848089..5848253 -
1693561564.5707736-CDS-P-fluviatile_contig1:5848088..58482531693561564.5707736-CDS-P-fluviatile_contig1:5848088..5848253Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5848089..5848253 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.541.1prot_P-fluviatile_contig1.541.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5844217..5848253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.541.1

>prot_P-fluviatile_contig1.541.1 ID=prot_P-fluviatile_contig1.541.1|Name=mRNA_P-fluviatile_contig1.541.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=354bp
MGKARDKAGKRGSGRQQGNQTDKAKERNERERLRKDRQRNMLYSSSVDDR
EFEAQVEQLGCKIKFIEGDGNCLFRSLADQLEGRSQDHSSIRTKVMDHLE
RNRDVFEPYMEDDESFDDYLARMRGDGEWGGNQELVAASQLYKANVVVHQ
FKAPRFFIPFEKARLTIHLSYHGEHHYNSVRAIGDEGDGPAQQIALQTPT
SRGAPRAEGSPWPQEEAAVARICPWAKPPEVVAALETTGGRSEDAIELLI
SAQNEPGLEGEAAEETGSGGEKMAKGRGGAPGGTLAMSTGKKSDKTAKIT
RAADCPCGSGLKYKKCCRKKDAAIARGQIAPPAEPESTSRESSVLDELGL
LVI*
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mRNA from alignment at P-fluviatile_contig1:5843077..5848454-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.541.1 ID=mRNA_P-fluviatile_contig1.541.1|Name=mRNA_P-fluviatile_contig1.541.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5378bp|location=Sequence derived from alignment at P-fluviatile_contig1:5843077..5848454- (Porterinema fluviatile SAG_2381)
GCACTGTGTACGCAATCGCCTCGATAAGGCTATCATCTCTCTCCCCTGTG GCTGGACTTCTGTACGCGAGAGTGTACAGATCCTGTAGTCACTGTGATTT TAAGCAGGGCTTTGGCTCTAGCTGAAGGCACGGCCGCAGCAGCCTCGGCT CAGCAAGACCGCAGCAGAACTGCTGGCACAAGCAGTCGATGGCGGTGGCC AATGGGGAAGGCACGAGACAAGGCCGGGAAGAGGGGTTCAGGCCGCCAGC AGGGAAATCAGACGGACAAGGCGAAGGAAAGGAACGAAAGGGAGAGGTTG AGGAAGGACCGGCAGCGAAACATGCTGTATTCCTCGAGCGTCGACGACAG AGAGTTCGAAGCTCAGGTGCATCAGGCGTTCATCATGCGATCCGGTACCC CCAACACAACGCCGACTTCGCACGCGATACTGCGCTTGAAAGCCGACGTC GCTCTCAATTCAAACCAAATACGCCGTGTTCTTATGATTTTCGACTTTTT AGAAGTCAGATTGCGCCTCTTTGGCGTACGTCGGCGAGCGTGCCCATATG CACATGTGCAGAGCGCTACAGCAGGCTAGTCACGAACCGGCCCATCCTCA ACGATCCAGACTCCTCATCTCGGAAGCCTTGTCTGGACGTCTGGGCGTCT CGATGCGCCGGCAGAACGAAGATTTCGAGGGCCTGCTGACAAAAGGTTTT GATTTGATTCATCTTTGTAACAAGGGGGAGGGGAACAGGATAAGTACCCC CACGCACTGGAAGCAGGGCTTCGTTTGTGTTCGACAAGAGCGGCGGCGTG GGCTTTTCTCTGCATGTACTCGGAGTACAAAATACCGCACAGATTACGTC GACTACTGTCCTGTCCAATTCCAATATGTGATGTCTGGAGTTCGCCAAAC TTCACCACACTGCTGTTTATCGATAGTTTTCAACAGTGTGGTAAGCGGAG GTGCAGGCCGGAGGGAAAAAGAACGTCCCATCTGCAAATTGCGCTTTCAT TGCGGCCCCGCGTATTTTTGCAAAGTGTAGATAGTTCACCGAGGCAGCTA ATCCGTGCGCGACTGGTGAGTTGACCGCATCTTCACGTGGGGCCAGGCCC TCCAAGCCTTTCGTATCAGGAGGCGTGTCCCACCCGAGCTCTGGTCGGAA AGGCTAAGGCTTGTCGAGTGTGGGATGTCGCCATTTTGGTGTCGCCCGCC CTTTTTTCAGTCATTCCGATCTCATCCACGAAACTTTCGGTGTTGTACTT GTTCCACCGATATTTCGCGGTGGTACGATTTTCGACGATAAAGCATTTGG GATGAGATGCAGCCTCCGACGAGGGACCCACCCGCCCACGTCTCTCCGTA TTTATGCCCTTTCCCTCGCCGTCTTGGCCTGACAAGCTCCCGACTCCCTA CTCGGACTCAATACAACAACGAAAACGCCTAATCAAATCCTACCCCTTGC GAAGGAACGATCGAATCCTTGGAATGGTACATTCCCAAGGGCAGCCGCCG AGGAGAAACGTTTACCCTGTGGATTTTCGGCCGAATCAGGGTACTTGAAG AGATGGTAATAGACAAAGCTGTGGCCTAGCCCTCGCAATGAATAGCAACA CAAGTCCGACTAATTCAAGCGGTCTTGGACATATCAAATCTCTCAGTAAT ACATCAGCCCACCAGGCTGGGTTTGGGCCTAACTTGTGGTTATTTCCTTT CCGGGGACCTGGCAGTAACCCCGATTTTCGGTCACGAGCGAAACGCCGAG GTTTTTGGCCATCGTATACTGTGGACAGGACCTGCATAGCCGTGCGATGG TCCATCCCCTGTTTTGGCTGGAATTTCGCTGGATATATCCTCTTGTGGAA GTGGTCCTTTTCTAAGGTACCGACGAAGCAGCCGAGACGGTGCGCGCCCA ATTGAGATGTGAGGTGTTGAAGGAGGAGGTTTGACCTGAAAAAAAAAGCG CCTTAAGCAAAAGACGAACAGCGTGTGTGCATGCACGGGCACAGAACTAC TGCTGAGGCTGAGGTATTGAAGGCTGCGGCACGTTGGAACGAAAATAGGC ACCTAGCGTCCGTTTGTACCGATCTGTTCGACTTCGTGTACTTTTACCCC GATGCCCCGCAGATGAAGCCGAAGCCCGCTCCGGTTCTTGTGGCCGTTGC ATTTTCCACTGCCGCGCTCGCCGCGACGGATTCCAGTCTCCTGAGTTGCG GATCTTACAGTAGTGCCAATGCCATTGGCTGCTTTTGACGACCCTCGGTT CAGGAGATTGGATTACGTGGCAGCGACAACGGCCATTACATATCAATTGT GTGCGGTTTCGGTTCAACTTGCAGTCTTCGAGACCTCAGCCTCCGCAGCA TGACGAGCGTGTCAACACACACATTGCCTCCACGTCGTGTCTGGTACTAG GACCGCCTTCTAGATCAGGCTCCTTCGGCCTGGAGGCAATTTTGGATTGT TTTGGCCCTGTCACTTTGGGTTCAGTTGAGGAAGTGTAATCGCTGCTGCC GCTTTAAATCCTCGGCAAGAGTTGCTTCTGTTGCCGCTGCCGCTGCCGCT GCCGCTGCCGCCGCCGCTGCCGCTGCTGCTGCATCACGTGGCAGGTCGAG CAGCTTGGGTGCAAAATCAAGTTTATCGAAGGAGACGGCAATTGCCTGTT CAGAAGCCTCGCCGACCAATTGGAAGGGCGATCGCAAGACCACAGTTCTA TCAGAACCAAGGTGAGACCAATTGCGAGCGGAGTGTGCACGGCTTAATTG GACACCAAGAAGCTTACAAGGAGAGTTTCGTGTGCCTCATACACGATTGC CTAGCAGTCTCACAATCCGCGTGTTTACGCGACACGCTTCAATTTTTCCC TCTATAGGTCATGGATCACCTAGAGAGAAACAGAGACGTTTTCGAGCCTT ACATGGAAGATGACGAATCTTTTGATGACTACCTGGCGCGCATGCGAGGA GATGGGGAATGGGGAGGGAATCAAGAGCTTGTCGCCGCGAGTCAGCTGTA CAAGGTGGGCGCGTCGCAATGGCTGATTCTTGTCTTCGTTAATTGCAGGC AGAACGTAGCAGGATGCAACAGGATGGAAGGCACCTCTAATCTTAAATTT TTAGATGTGTTGCCGGAGAACGCACATTTATTTTGCGGTCAGCTGGAAAT GCTACCCTACGTTTCTTTTGGCACGGCGATGTTACCACTTTTCTTGCTTT GCAACAGTGGCTTCATCTGTCACAAAGTCAATGCGGATCCCTTCACACGG ATGCGTGATCAGCTCTTTCTCGTCCCGGCGTTCCTCGTCTACGTTCCTAA GCAGGCGAACGTGGTTGTGCACCAGTTCAAGGCACCTCGATTTTTCATCC CTTTTGAGAAAGCAAGATTGACCATCCACCTGAGTTATCACGGAGAACAC CATTACAACAGCGTCAGAGCGATAGGTGACGAAGGCGACGGACCAGCGCA ACAAATCGCCCTCCAAACCCCAACCTCAAGGGGTGCTCCCCGCGCTGAGG GTGAGACACAGAGCTGAGCGAAATATTTCCGGTCACGTCGGGCACACGCC AACACCCGCGGAGGATGGTGCATAGGAGGAAACATGTTTGCAACCCGGTC GACGCATATGTTTTAGGTGTAAGGGAACTATCGAGATCATGCGAAGTGTT TTTGTTTCATCGTACTCACATTATTAACAGACCAGATTCTCGGATACAGT CTGCGCATCCCCTTCCTACTGTCGGGCAATGTAACGCCCTTCAATATTAC TTCCAATTCAAGTAACATGTTCGATTTCGCATTTTCACTTGTTCGGTGCA GGAAGTCCGTGGCCTCAAGAGGAAGCAGCTGTGGCCCGAATCTGCCCGTG GGCGAAGCCGCCGGAAGTTGTTGCGGCTTTGGAAACCACCGGCGGGAGAA GCGAAGACGCAATCGAGCTTCTCATTTCAGCGCAAAACGAGCCCGGGCTC GAGGGAGAAGCAGCAGAAGAAACGGGGAGCGGAGGTGAAAAAATGGCGAA AGGGCGGGGCGGGGCGCCTGGCGGCACGCTGGCGATGAGCACGGGGAAGA AGAGCGACAAGACTGCGAAGATCACCAGGGCTGCGGATTGCCCTTGCGGA AGCGGGCTCAAGTACAAAAAGTGCTGCCGGAAGAAAGATGCGGCAATCGC CAGGGGTCAAATTGCTCCTCCTGCGGAGCCAGAGAGCACATCGAGGGAAT CCTCAGTTCTGGACGAGTTGGGCTTGTTGGTGATTTGAACATTTGCTTTT GTGTGGCCAAATTTTGGCCGATGCGTTGGAAGATGCAAATCTTCAAGAGG TTTGTGTGTGTTTTTGTGTACATGTCTGTTTCTCACGCGACCTATCTAGG TCGCTGTCAGGGTGCAAGCAACCTTCGCGTGGAAGGTGGCCTACTTCAAC GGATTGAATACCAAGAGCGGCTTGTGAATGTGTTGATCCCAGCCGGCGCG GTTCGGTTGGTGTCGCTAAAAGTTCCAAGGGCGGGTTTGGTATAGTATGT ACGAAACGTACTATCGAGGTTTTCAGTAGGTATTGAATTCACCGTCGCAC TAAGCGTACTAATGCGTTGTACGGCTCTCCATACTATACTAAACGTACTG TTGCGTTTAGTACGGCTCTCCATACTATGCTAAACGTACTACTGCGTTTA GTACGGCTCTCCATGCCATACTGTACTGAAGATTTGGTGTGAGTATTTCG GCCGATACTTATTCACCGAGGATAGTATTTCACCCACAATACTCAACTTA CTGTTGCAATTAATACGACTAGCCAAACTGTACTAAACGTACTCGTTCGT TTAGTACTGCTCTCCATACTATGCTAAACGTACTCAATCGTTTAGTACGG CTCTCAATACTACACTGTACTATAGGTCTAGTAGGGGTCTCTATGCTGTA CTAAACGTACTAATTTCTTTATTACGCCTCTCCATACTATACTAAACGTA CTATTGCGTTTAGTACGGCTGCTTGGAATCTGAGCTGTTGCAGGTGCTTG ATGCATATGCTTTGATGCTTAAGCGTTTGAACTATGAAGGCGTACGTTTA GTATTGGCTCCCATACGATACTCTGCACTGGGGGATTAGTAGGGCTCCCG GTACTGTGATATCCCTACTCTCGCGTTTAGTACGGCTCTGGGTACTGTAC TTGGCGTACTTTTGCGTTTAGTAGGGCTCTGGGTACTGTACTAAGCGTAC TGTTGCGTTTAGTAGGGCTCTCGGTACTGTACTAAGCGTACTGTTGCGTT TAGTACGGCTCTTCATACTATACTAAACGTACTACTGCGTTTAGTACGGC TCTCCATGCTATACTGTACTCAAGATTTGGTGTGAGTATTTCGGCCGATA CTTATTCACCGAGAATAGTATTTCACCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5843077..5848454-

>mRNA_P-fluviatile_contig1.541.1 ID=mRNA_P-fluviatile_contig1.541.1|Name=mRNA_P-fluviatile_contig1.541.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2124bp|location=Sequence derived from alignment at P-fluviatile_contig1:5843077..5848454- (Porterinema fluviatile SAG_2381)
ATGGGGAAGGCACGAGACAAGGCCGGGAAGAGGGGTTCAGGCCGCCAGCA
GGGAAATCAGACGGACAAGGCGAAGGAAAGGAACGAAAGGGAGAGGTTGA
GGAAGGACCGGCAGCGAAACATGCTGTATTCCTCGAGCGTCGACGACAGA
GAGTTCGAAGCTCAGATGGGGAAGGCACGAGACAAGGCCGGGAAGAGGGG
TTCAGGCCGCCAGCAGGGAAATCAGACGGACAAGGCGAAGGAAAGGAACG
AAAGGGAGAGGTTGAGGAAGGACCGGCAGCGAAACATGCTGTATTCCTCG
AGCGTCGACGACAGAGAGTTCGAAGCTCAGGTCGAGCAGCTTGGGTGCAA
AATCAAGTTTATCGAAGGAGACGGCAATTGCCTGTTCAGAAGCCTCGCCG
ACCAATTGGAAGGGCGATCGCAAGACCACAGTTCTATCAGAACCAAGGTC
GAGCAGCTTGGGTGCAAAATCAAGTTTATCGAAGGAGACGGCAATTGCCT
GTTCAGAAGCCTCGCCGACCAATTGGAAGGGCGATCGCAAGACCACAGTT
CTATCAGAACCAAGGTCATGGATCACCTAGAGAGAAACAGAGACGTTTTC
GAGCCTTACATGGAAGATGACGAATCTTTTGATGACTACCTGGCGCGCAT
GCGAGGAGATGGGGAATGGGGAGGGAATCAAGAGCTTGTCGCCGCGAGTC
AGCTGTACAAGGTCATGGATCACCTAGAGAGAAACAGAGACGTTTTCGAG
CCTTACATGGAAGATGACGAATCTTTTGATGACTACCTGGCGCGCATGCG
AGGAGATGGGGAATGGGGAGGGAATCAAGAGCTTGTCGCCGCGAGTCAGC
TGTACAAGGCGAACGTGGTTGTGCACCAGTTCAAGGCACCTCGATTTTTC
ATCCCTTTTGAGAAAGCAAGATTGACCATCCACCTGAGTTATCACGGAGA
ACACCATTACAACAGCGTCAGAGCGATAGGTGACGAAGGCGACGGACCAG
CGCAACAAATCGCCCTCCAAACCCCAACCTCAAGGGGTGCTCCCCGCGCT
GAGGGCGAACGTGGTTGTGCACCAGTTCAAGGCACCTCGATTTTTCATCC
CTTTTGAGAAAGCAAGATTGACCATCCACCTGAGTTATCACGGAGAACAC
CATTACAACAGCGTCAGAGCGATAGGTGACGAAGGCGACGGACCAGCGCA
ACAAATCGCCCTCCAAACCCCAACCTCAAGGGGTGCTCCCCGCGCTGAGG
GAAGTCCGTGGCCTCAAGAGGAAGCAGCTGTGGCCCGAATCTGCCCGTGG
GCGAAGCCGCCGGAAGTTGTTGCGGCTTTGGAAACCACCGGCGGGAGAAG
CGAAGACGCAATCGAGCTTCTCATTTCAGCGCAAAACGAGCCCGGGCTCG
AGGGAGAAGCAGCAGAAGAAACGGGGAGCGGAGGTGAAAAAATGGCGAAA
GGGCGGGGCGGGGCGCCTGGCGGCACGCTGGCGATGAGCACGGGGAAGAA
GAGCGACAAGACTGCGAAGATCACCAGGGCTGCGGATTGCCCTTGCGGAA
GCGGGCTCAAGTACAAAAAGTGCTGCCGGAAGAAAGATGCGGCAATCGCC
AGGGGTCAAATTGCTCCTCCTGCGGAGCCAGAGAGCACATCGAGGGAATC
CTCAGTTCTGGACGAGTTGGGCTTGTTGGTGATTTGAGAAGTCCGTGGCC
TCAAGAGGAAGCAGCTGTGGCCCGAATCTGCCCGTGGGCGAAGCCGCCGG
AAGTTGTTGCGGCTTTGGAAACCACCGGCGGGAGAAGCGAAGACGCAATC
GAGCTTCTCATTTCAGCGCAAAACGAGCCCGGGCTCGAGGGAGAAGCAGC
AGAAGAAACGGGGAGCGGAGGTGAAAAAATGGCGAAAGGGCGGGGCGGGG
CGCCTGGCGGCACGCTGGCGATGAGCACGGGGAAGAAGAGCGACAAGACT
GCGAAGATCACCAGGGCTGCGGATTGCCCTTGCGGAAGCGGGCTCAAGTA
CAAAAAGTGCTGCCGGAAGAAAGATGCGGCAATCGCCAGGGGTCAAATTG
CTCCTCCTGCGGAGCCAGAGAGCACATCGAGGGAATCCTCAGTTCTGGAC
GAGTTGGGCTTGTTGGTGATTTGA
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