mRNA_P-fluviatile_contig1.538.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.538.1
Unique NamemRNA_P-fluviatile_contig1.538.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: D7FGR6_ECTSI (NDK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGR6_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 7.580e-104
Identity = 163/200 (81.50%), Postives = 167/200 (83.50%), Query Frame = 3 
Query:  210 IASE--SQRKAALCT-PSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            +ASE   Q++ ALC  P+FKYTGEPGT HERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTK MAA HYADLSKKPFF GLVDYF SGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTE                     EECSAWPRTLD WIVADN
Sbjct:   59 LASERQQQQETALCAAPAFKYTGEPGTAHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKEMAANHYADLSKKPFFSGLVDYFSSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTE---------------------EECSAWPRTLDAWIVADN 237
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A835YSZ5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.450e-73
Identity = 122/193 (63.21%), Postives = 143/193 (74.09%), Query Frame = 3 
Query:  222 SQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            +Q++ A C  +F YTG  GT +ERSFIAIKPDGVQR L+ EVISRFEKKGYKLVAMKMIW T+ MAA HY DL  +PFF  LV YF SGPIVAMVWEGP+VI TGRK+LGATNP +++ G+LRGD+C+  GRN+IHGSDG ESA HEIGMWFTE                     +ECSA+ R++D WIVADN
Sbjct:   53 AQQERAECA-AFPYTGVAGTGNERSFIAIKPDGVQRGLIAEVISRFEKKGYKLVAMKMIWATEEMAANHYDDLKGRPFFPALVKYFASGPIVAMVWEGPDVIKTGRKILGATNPQAADVGTLRGDFCLTTGRNIIHGSDGPESAAHEIGMWFTE---------------------KECSAYSRSIDSWIVADN 223
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A7S2XZK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.920e-71
Identity = 116/198 (58.59%), Postives = 137/198 (69.19%), Query Frame = 3 
Query:  207 VIASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            ++A       A C  S  YTG PGT HER+FIA+KPDGVQR LVGE+I+RFEKKGYKLVAMK+IW T+     HY+DL+ +PFFGGLV YF SGPIV MVWEGP+ + TGRKMLGATNP +S+PG++RGD+C+ VGRNLIHGSD  +SA+ EI  WFT                      EEC  WPRTLD WI  DN
Sbjct:   46 LVAGAGLTTVAACE-SVPYTGLPGTAHERTFIAVKPDGVQRGLVGEIIARFEKKGYKLVAMKLIWATEEKTKAHYSDLAARPFFGGLVKYFSSGPIVGMVWEGPDAVKTGRKMLGATNPLASDPGTIRGDFCVVVGRNLIHGSDATDSAEKEIANWFTP---------------------EECYDWPRTLDAWITEDN 221
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A485KUH1_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUH1_9STRA)

HSP 1 Score: 237 bits (604), Expect = 7.490e-71
Identity = 122/204 (59.80%), Postives = 148/204 (72.55%), Query Frame = 3 
Query:  192 VLGGLVIASESQRKA-ALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            V  GL  +S ++ KA A  +P   YTG PGT +ER+FIAIKPDGV+R L+ EVI+RFEKKGYKLVA+K++ PT+A A +HYADLS +PFF GLV YF SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT+  +     D H                 R++D WIVADN
Sbjct:   42 VAAGLAFSSPAENKAIAKVSP---YTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLVALKLLTPTEARAREHYADLSGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAPPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEIN----DYH-----------------RSIDDWIVADN 221
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A1W0ABA6_9STRA (Nucleoside diphosphate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA6_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.430e-70
Identity = 128/238 (53.78%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:  105 ALRLSSRASAGAVSAKAXXXXXXXXXXXXVLGGLV------IASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            AL+  SR +A A+S +             V+ G+        A+ ++ KAA       YTG PGT HER+FIAIKPDGV+R L+ EVI+RFEKKGYKLVAMKM+  T+A A  HYADLS KPFFGGLV YF SGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT                     Q E + + R++D W+V+DN
Sbjct:    6 ALQSVSRTAARAMSTRGAAVAAKSKTPLMVVAGITAATAMAFAAPTELKAAPRVSP--YTGVPGTKHERTFIAIKPDGVERGLISEVIARFEKKGYKLVAMKMMTATEARARDHYADLSSKPFFGGLVKYFASGPIVCMVWEGNDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFT---------------------QAEINDYARSIDEWVVSDN 220
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A6G0XYC2_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYC2_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.240e-69
Identity = 117/203 (57.64%), Postives = 143/203 (70.44%), Query Frame = 3 
Query:  192 VLGGLVIASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            +  GL   + ++ KA        YTG PGT +ER+FIAIKPDGV+R L+ EVI+RFEKKGYKL+A+K++ PT+A A +HYADL+ +PFF GLV YF SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG ESA+HEIGMWFT                      EE   + R++D WIVADN
Sbjct:   42 IAAGLAFGAPAEAKAVKKVSP--YTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLIALKLLTPTEARAREHYADLAGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPESAKHEIGMWFTA---------------------EEIQDYERSIDEWIVADN 221
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A067CQA9_SAPPC (Nucleoside diphosphate kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQA9_SAPPC)

HSP 1 Score: 233 bits (593), Expect = 3.050e-69
Identity = 119/200 (59.50%), Postives = 143/200 (71.50%), Query Frame = 3 
Query:  204 LVIASESQRKAA-LCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            L  ++ +Q KAA   TP   YTG  GT HER+FIAIKPDGV+R L+ EVI RFEKKGYKLVAMK++  T+A A++HYADL+ +PFFGGLV YF SGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT                     Q E   + R++D W+VADN
Sbjct:   45 LAFSAPAQNKAAPRVTP---YTGVAGTKHERTFIAIKPDGVERGLISEVIGRFEKKGYKLVAMKLMTATEARASEHYADLAGRPFFGGLVKYFASGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFT---------------------QAEIQDYTRSIDEWVVADN 220
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A024UVV3_9STRA (Nucleoside diphosphate kinase (Fragment) n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UVV3_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.110e-68
Identity = 120/204 (58.82%), Postives = 142/204 (69.61%), Query Frame = 3 
Query:  192 VLGGLVIASESQRKAAL-CTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            V  G+  ++ ++ KA    TP   YTG PGT +ER+FIAIKPDGV+R L+ EVI RFEKKGYKLVAMK++ PT+A A +HYADLS +PFF GLV YF SGPIVAMVWEG +VILTGRK+LGATNPN + PG+LRGD  I  GRNLIHGSDG ESA+HEIGMWFT   +                       + R +D WIVADN
Sbjct:   60 VAAGIAFSNPAESKAVKKVTP---YTGIPGTKNERTFIAIKPDGVERALISEVIGRFEKKGYKLVAMKLLTPTEARAREHYADLSSRPFFNGLVKYFSSGPIVAMVWEGQDVILTGRKILGATNPNQAAPGTLRGDNTISTGRNLIHGSDGPESAKHEIGMWFTAAEI---------------------QDYERAIDEWIVADN 239
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: A0A662Y1S8_9STRA (Nucleoside diphosphate kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1S8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.020e-68
Identity = 141/250 (56.40%), Postives = 166/250 (66.40%), Query Frame = 3 
Query:   54 MFSRVASKVTLVPVRVAALRLSSRASAGAVS-AKAXXXXXXXXXXXXVLGGLVIASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            MFSR + +V     R AA  LS++      S AK XXXXXXXXXXXX       A E+Q K A   P   +TG PGT  ER+FIAIKPDGVQR L+ EVI+RFEKKGYKLVA+K++  ++  A  HYADLS++PFF GLV YF SGPIV MVWEG +VILTGR++LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEIGMWFT   V                     S + R LD WIVADN
Sbjct:    1 MFSRASRRVAAAAKRSAARSLSTQTRPAVASVAKXXXXXXXXXXXXXXXXXFSAAPEAQSKPA---PKVPHTGVPGTAKERTFIAIKPDGVQRGLISEVIARFEKKGYKLVALKLMTASEERARAHYADLSERPFFPGLVKYFTSGPIVCMVWEGTDVILTGRQILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTPAEV---------------------SDYQRALDTWIVADN 226
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BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Match: M4B5V5_HYAAE (Nucleoside diphosphate kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5V5_HYAAE)

HSP 1 Score: 226 bits (576), Expect = 1.220e-66
Identity = 135/251 (53.78%), Postives = 160/251 (63.75%), Query Frame = 3 
Query:   54 MFSRVASKVTLVPVRVA--ALRLSSRASAGAVSAKAXXXXXXXXXXXXVLGGLVIASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN 800
            MF+RV+S++     R A       SRA++   +  A    XXXXXXXX      IA      A   TP   + G PGT  ER+FIAIKPDGVQR L+ EVI+RFEKKGYKLVA+K++  T+  A  HYADLS++PFF GLVDYF SGPIV MVWEG +VILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDG +SA+HEI MWFT                       E S + R LD WIVADN
Sbjct:    1 MFTRVSSRIASAAKRSARRTFATQSRAASSIKAPAALAVAXXXXXXXXXXTATPIAENKGTSAQTITP---HAGVPGTSKERTFIAIKPDGVQRGLISEVIARFEKKGYKLVALKLMTATEERAKAHYADLSERPFFPGLVDYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEISMWFTAA---------------------EMSNYDRALDTWIVADN 227
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGR6_ECTSI7.580e-10481.50NDK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSZ5_9STRA2.450e-7363.21Nucleoside diphosphate kinase n=1 Tax=Tribonema mi... [more]
A0A7S2XZK8_9STRA1.920e-7158.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485KUH1_9STRA7.490e-7159.80Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
A0A1W0ABA6_9STRA1.430e-7053.78Nucleoside diphosphate kinase n=1 Tax=Thraustothec... [more]
A0A6G0XYC2_9STRA2.240e-6957.64Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
A0A067CQA9_SAPPC3.050e-6959.50Nucleoside diphosphate kinase n=3 Tax=Saprolegniac... [more]
A0A024UVV3_9STRA1.110e-6858.82Nucleoside diphosphate kinase (Fragment) n=5 Tax=A... [more]
A0A662Y1S8_9STRA2.020e-6856.40Nucleoside diphosphate kinase n=2 Tax=Nothophytoph... [more]
M4B5V5_HYAAE1.220e-6653.78Nucleoside diphosphate kinase n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5810975..5816917 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue1.3e-86
Seed eggNOG ortholog2880.D7FGR6
Preferred nameNDPK2
KEGG rclassRC00002
KEGG koko:K00940
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG ModuleM00049,M00050,M00052,M00053
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0006139,GO:0006165,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007602,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009636,GO:0009639,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009755,GO:0009941,GO:0009987,GO:0010017,GO:0010033,GO:0010035,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032870,GO:0033554,GO:0034404,GO:0034599,GO:0034614,GO:0034641,GO:0034654,GO:0035690,GO:0042221,GO:0042455,GO:0042493,GO:0042542,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046677,GO:0046939,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0055086,GO:0061508,GO:0065007,GO:0070013,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071310,GO:0071365,GO:0071478,GO:0071482,GO:0071489,GO:0071495,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
EC2.7.4.6
COG Functional cat.F
BiGG ReactioniRC1080.CRv4_Au5_s16_g6072_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-04_001140.1
Exons7
Model size1830
Cds size750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815349.5837939-UTR-P-fluviatile_contig1:5810974..58110271622815349.5837939-UTR-P-fluviatile_contig1:5810974..5811027Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5810975..5811027 +
1693561563.8115318-UTR-P-fluviatile_contig1:5810974..58110271693561563.8115318-UTR-P-fluviatile_contig1:5810974..5811027Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5810975..5811027 +
1622815349.7292078-UTR-P-fluviatile_contig1:5815890..58169171622815349.7292078-UTR-P-fluviatile_contig1:5815890..5816917Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5815891..5816917 +
1693561563.8890924-UTR-P-fluviatile_contig1:5815890..58169171693561563.8890924-UTR-P-fluviatile_contig1:5815890..5816917Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5815891..5816917 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815349.6512878-CDS-P-fluviatile_contig1:5811027..58112761622815349.6512878-CDS-P-fluviatile_contig1:5811027..5811276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5811028..5811276 +
1693561563.8242524-CDS-P-fluviatile_contig1:5811027..58112761693561563.8242524-CDS-P-fluviatile_contig1:5811027..5811276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5811028..5811276 +
1622815349.6637933-CDS-P-fluviatile_contig1:5811646..58117361622815349.6637933-CDS-P-fluviatile_contig1:5811646..5811736Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5811647..5811736 +
1693561563.832721-CDS-P-fluviatile_contig1:5811646..58117361693561563.832721-CDS-P-fluviatile_contig1:5811646..5811736Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5811647..5811736 +
1622815349.6764364-CDS-P-fluviatile_contig1:5812656..58126991622815349.6764364-CDS-P-fluviatile_contig1:5812656..5812699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5812657..5812699 +
1693561563.841583-CDS-P-fluviatile_contig1:5812656..58126991693561563.841583-CDS-P-fluviatile_contig1:5812656..5812699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5812657..5812699 +
1622815349.6903813-CDS-P-fluviatile_contig1:5813718..58138621622815349.6903813-CDS-P-fluviatile_contig1:5813718..5813862Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5813719..5813862 +
1693561563.8507848-CDS-P-fluviatile_contig1:5813718..58138621693561563.8507848-CDS-P-fluviatile_contig1:5813718..5813862Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5813719..5813862 +
1622815349.6999931-CDS-P-fluviatile_contig1:5814441..58145451622815349.6999931-CDS-P-fluviatile_contig1:5814441..5814545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5814442..5814545 +
1693561563.860049-CDS-P-fluviatile_contig1:5814441..58145451693561563.860049-CDS-P-fluviatile_contig1:5814441..5814545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5814442..5814545 +
1622815349.7109966-CDS-P-fluviatile_contig1:5815157..58152201622815349.7109966-CDS-P-fluviatile_contig1:5815157..5815220Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5815158..5815220 +
1693561563.8686843-CDS-P-fluviatile_contig1:5815157..58152201693561563.8686843-CDS-P-fluviatile_contig1:5815157..5815220Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5815158..5815220 +
1622815349.7199962-CDS-P-fluviatile_contig1:5815833..58158901622815349.7199962-CDS-P-fluviatile_contig1:5815833..5815890Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5815834..5815890 +
1693561563.877579-CDS-P-fluviatile_contig1:5815833..58158901693561563.877579-CDS-P-fluviatile_contig1:5815833..5815890Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5815834..5815890 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.538.1prot_P-fluviatile_contig1.538.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5811028..5815890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.538.1

>prot_P-fluviatile_contig1.538.1 ID=prot_P-fluviatile_contig1.538.1|Name=mRNA_P-fluviatile_contig1.538.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=250bp
MFSRVASKVTLVPVRVAALRLSSRASAGAVSAKASSAACAAAAAAAVLGG
LVIASESQRKAALCTPSFKYTGEPGTVHERSFIAIKPDGVQRQLVGEVIS
RFEKKGYKLVAMKMIWPTKAMAAKHYADLSKKPFFGGLVDYFCSGPIVAM
VWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESA
QHEIGMWFTEVNVARSKFDLHLCPFIQWSVQEECSAWPRTLDPWIVADN*
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mRNA from alignment at P-fluviatile_contig1:5810975..5816917+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.538.1 ID=mRNA_P-fluviatile_contig1.538.1|Name=mRNA_P-fluviatile_contig1.538.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5943bp|location=Sequence derived from alignment at P-fluviatile_contig1:5810975..5816917+ (Porterinema fluviatile SAG_2381)
ACTATTATTGCCTTTTCTCTCTTCTCTCTCTCGCCCCCTTCCCCTTTTAC
AACATGTTCTCTCGGGTGGCAAGCAAGGTGACGCTCGTACCCGTCAGGGT
GGCTGCTCTGCGTCTATCTTCTAGGGCATCAGCAGGAGCAGTGTCTGCCA
AAGCCTCCTCTGCAGCTTGCGCGGCCGCTGCGGCTGCGGCCGTTCTTGGC
GGTCTAGTGATCGCCAGCGAGAGCCAACGGAAGGCGGCTCTGTGCACCCC
CTCGTTCAAGTACACTGGAGAGCCTGGTACTGTCCACGAGAGAAGCTTCA
TCGTGAGTCATGGATGACGAATATAGAGAAGGTGTGGGTGGCTTGATCCG
TGCGGGAACAACTGTCCGTCTGTTTTTTGTGCGTATGGATGGACACGCAC
ACCACACAAGTAGTGTTGCGTCGCATGTAGGCGTGACCGTGAATTTTTTT
TCCGACGAAAGTTTTGTTATCTGGTGCTTCATTTCTCTAGGATGGCCGAC
TGTCTCTCCCCGTTCCCGTTCGGCTCTTATATCGAGAGGTAGGGAAGGAG
AGAAGAAATAGCAGATCCTTCTGTGACTATGTCGGATGCATATCTTATTA
AATAGTTCCCGCTGCGAACGTTGCTGCTGACTGCTGACGTTGTTACCGAT
GGGTTACTCTGCTTATAAACAGGCCATCAAACCCGACGGCGTGCAGCGCC
AGCTCGTTGGAGAGGTCATCTCTCGCTTCGAGAAGAAGGGCTACAAGCTG
GTTGCGATGAAGGTGCGCGGCTTGTCCGAACATGTGTGCTCAATCAGTAC
TTGCGCCCAACATTCACATGATTGGCATAAGGACGTTCCCGCCTCCACGC
CGCCGAAAGTCATCCATCATAAAACTCAGATGTACTGATGGTCATGGATT
GAGGGACCTCAATCCACCTGATACGGTTCGAGTCAAGTGTGCGCATGCCC
CCAGACTTCGTGTCATATGGCTAATTCATTTTGTTCACACACACAAAAAA
AAAGCGCGAACGAACCCCCCTCCCTTCCCCCAATGCGGCCGCATGCCGCC
GCCGTGTGCACCATACTCCACCTTGTAACGCGACATGTACAAGATTGCAA
GATTTCTTAAATTTATTGTGTAGCCCTGGCAGTCGCAAGTCTGAAATCGC
TTCGCACGTTTTCCATCCAGCAAGTATACAAGATAGATTGGGAGATCAGT
GCCTTACGGCCCTGCACAACCAGGGCCAGGTACGAATGAACGTATGTTGC
CCCCCGAAGCCCCGTCGCTGCTGCTGCCGTCACGAGAAGGGCCACCCAGC
TTTCGGCACCCGGAATACAACACATCACTGAAGCGACCTATGGGGCTCGC
ATTCGTGAAGATTGCCTTGTTCCGATGCTCCGTGATTACTCTGCGGGCGC
GTGACCGCCCTCGTCACATCAAGGTTCAAGTTGATGCACGTGACCTTCTG
CGCACAATGTTCTTTTTCCAGCTCATTCGCGCAATGGAAACCCCACATAT
TTCACGTTGCGGCTGGCCATCAGAACGATGTCTATCTCTGTGTTTTGTGA
ACAAAAACGCGTCCCATTTTGGTGGCGGACACAACCCGGCATTCTCATCC
CTGCCTCGAGCTGACAAAACCATCGCGCGTGTGTTTTATTTTTACGGATG
GCCGCGACGTGTGTTCCTCCTCCCGCCTTCAGATGATCTGGCCCACCAAG
GCGATGGCAGCCAAACACTACGCTGGTAAGACAGAGGTTGGGATAGTTTG
GGAGAAAGAGAGGGGGGAGGGGAGGGAGGGGGAGCGAGGCAGAGGCAGAG
AGAAGACGCGAGGTGCGTGATAGTCGCCGTACACCACGGTGTTCACAACT
TCTGCCTTAGGCTTCCCGCCTTGCACTGCCGCCTTAGCTGATTTTCAAAG
CTCGACTGCTGCACTACCGAGCAGCTACTGGTGCCGTGTCTGGCGTTTTC
GGCGAGAGCTCTGGATGAGATTTTTTCAGAGCCGCGCTCGTCAGCCCCGA
CACTCATACACTCTGTGGGTGGAGCTTTCGGGCCCCGAAAGTCGCCTCGA
GAGGGGTGCGCGTAGCGTAGATGCATCGTCTTACGTTCATTGCACTCGAC
CCCAGCGTCAATTTCCTCTAGCAAAGCTGTTTCCGGGTACTATGTTCCCA
CGTTGGCACAGCGTTCAAGGCTCAGGGAATTGTGTCCCCAAACGCTGAAC
AAATGACAAATGTGGTGCTTCTCAAATCAACGTGCGTCTGCGCAACCACA
ACTCCTTCAGCGAGAGGTTATCCTTCTTTGTCGCACCCCCTCGCGGCTGC
CGGGGTGGTCGATTCAAGAGGTGCCTGTCCTCGCAGAATCTCCCACTTCT
ATCTGTTGACCTTGTGTTTGCTTCCATTGAAAGAAGGAAATCAGCCACGC
AAGCGTCACCCAATATCTCGTATCGGCGCCTGTACCTCTCGACACCTCCC
TCCAACGTGACTTCACCCCTTCTATCGTACACGCGATTCTATATTCATTC
TTTCTCCGATATTGCGCACCAATTTGATGGGATACGAAGCATAGGCAAAG
CATGCCACTGCTACAGGTGGAGGCGCTTCCAAAGCTGGGCCCGGCCCCCG
CCTCGACGTCTCTGTCTCCGAGCGCGCTCACGCGCATTTTTGCCCGTGAG
TTCGAACGCGTTTATTTTATTTCTTTCGCACACGTTAAGTTCTCTCCAAA
AATTCGCGCAAACCTATTTTTCTTTATTTTGCTCGCCCTCACAGACTTGT
CAAAGAAGCCCTTCTTCGGAGGTTTGGTCGACTACTTCTGCAGCGGGCCG
ATCGTTGCCATGGTGTGGGAAGGGCCCGAGGTTATCCTAACCGGCCGCAA
GATGCTGGGAGCGACCAACCCTAACTCCTCCGAACCAGGTGAGGTTAGCG
CGACGGGCTCCGGCTGTCGGGAACGATGGACCTTCTGCGATGTATTTTGA
TGATGTATCGCTGTAAATCGCTTTGTTGTTGTTGTTGTTGTTGTTGTTGC
TGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTTTGTTTAGTAGTAGTAGCTCTTGAGTCGTGGTC
CGTCCTTGGTGATGGTGTCGTCGTCGTCATTTTTGGTCGTGGTCCTGTCA
GAAAGTTTTGCATTTCGTTCTCCAACAACTCATCGCCTCCATGTCCCGTG
CTCATCGCCACCGCGGCGGGGGCCAACCGCAGCAAAGCGACTGCAAGCCG
TCAGAGGGCAGGCACCTTCGACCCCGTTGCAGAAGCAACACCCAAAGGCA
GGCTAAGACAACACGCCAAAGCGGACACGTTGAGTAGATGACAGTCCACG
AAACACTGGAAAACCCCAATGTCGGCATTTGTGTACGGTTTGGAGATGAT
AATCCCTTGGGACTCGTTTTTTTTTCGGCGCCTCCTCTTTCGCGCGCGCG
TTCCGCGAAAAAATCAGGTTCCCTCCGCGGGGACTACTGCATCCGCGTGG
GAAGGAACTTGATCCACGGGAGTGATGGCGGCGAGAGCGCGCAGCACGAG
ATCGGCATGTGGTTCACAGAGGTGAGAGAGCGATTGAGTTGGGAGGGGGC
AAGAGGGGAGAGCGGAGCACCGGAGTGGAGAGGAGAGAAGGGGGCAGGAG
TAGGGTGAGACGCGAGCGACTGATGTTTTGAAGCGTGTGCGTCGCGACGA
CAAGCTTTGGAAACAAATCGAAAGCGAGGGGGCGACGGGGAAGCACGATT
GAGACCTGGCTTGTAGGGGGCGTACTCATGTTTTGCATGCCTTAGTTGCT
AGACCATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCGCAGTA
TAGATCACCGATGGCCAATCGTTCCTTCCTACTTTGCCAAAGGTGGCTCA
AAAATGTTTTCCCTAACCTGTCTACTTTATACCTATCCCTCCTGGGCCAC
ATCTTATACCCGAGTACCGCTACCGTCTTCTCCTCTTTGTTCCATGCCTC
AAACTTCTTTCTATCCCGACTGTCTACTTTTTCCAGCTCAACCATGTACG
CTCCTCTCTCCTGATCGTATAACGGGTATTCCGCAACTACATGTACCCGG
TCTTCGCATTCGGCGCCGCAGTCACATTTGAAGTTGTCTTCGTCGTCGTC
TACCTTCCTAAACCTCCTTCTACGTTCCCGCAGGTCAATGTCGCCCGTTC
TAAATTTGACCTTCATCTTTGTCCCTTCATCCAATGGTCCGTTCAGGTAC
TCCTTGAACCCTATTCCTTCATTCAGCCTTCCGCACACTTCTAGAACCTC
CTTTTCCTTGGTCTCTTTCCACAAGCTCTGGTCTTCTCTATTTTCAAAGG
CTTCTGAGATACACTTGTAGGGGGGGCGGAGGGCTTGAAGCGGAGCGTGA
GATTCGTCTGTTTCTTGGCGGCGCACATCTACGGAGTGAGAAAGGAGAGC
AGGACGGCCCTAAGCGGTCATATGACACAGGGCGCGGCGTGATGGCACGA
CGCCGTCGAACGCACGACGTAAACCGTATCGCAGGGGGAAGACGTGTCTA
GGGGTTCACAACCAGTCGGAGAGCATAACTAAAATGATTTCACGCCTCCC
CTGCGATGAGTTCACCTAGCGACCGACGATGGGCAGAAGCTTCTTCGGTG
AACCGCTGGCGCATGTTGTCGCATGCGCGATTTTTGTGTGCGACTTTTTC
GACTTCGCGTACTTTACTCTTGTGCGCCGCAGGCGATGAAGGCTCTTACA
ACTCTTGTTGGAAGTGTTGTCTGCATTCTTACCGATCGTGGCTTGAGTGC
GGACCTCGGCTTCAACGCTTTCCTCGGTCTTCTCGTTTTTGAACCGAAAC
CTGCTGCAGGAGGAGTGCTCCGCGTGGCCCCGTACTCTCGACCCGTGGAT
CGTGGCGGACAACTAAGCAGGGGGTTGCTCTCGCTGGTTGAATGGACACT
AATTCCTGGAGCGGGATTGGAGTCCACATGAGCTGTTGTGGAACGCATGC
TGTACACAACCACCAATTTTGTTCTTTGTCGTAAAGTGTGGCGTTCGTGA
CGTTTCCGCGCCAGGCGCAGGATGGATCAGGAACCGTTTTTTTGAGGAAG
TATACTGCGTCGAAAAGATAGCGGCGGAAACGCACGATCATAAATTTCCA
CGTTGTGTTGCAGCAGCGTGGGCTTTGACGGGTTTTACCTCAAGGCTACA
CCCCCCACTCGCCTGCGCGCCTGATGCATCATTGGAAATGGAAATCGGCG
TTTTTCTATTGCCCAATACGTTGTTCCGGAACGAGGATAGCGATTTTAAA
GCAGAGAAGAGGGTGGCGGTGCGATGATGCCTTCCCGGTCGATACTGCGA
GTTGCATCCAGTTGCAGGCAAGCTTCCGAGTCTTTCGCACCCGGGGGTCA
CCAGACGGGGATGGGCGAGGCCAGGGTTTTGCTTTTCGGGAGGGCGCTAC
GCGCGAGCAGCCTTCTCCCGACCGCTCCTCACGTTTTGGGTAGGAAAAGT
CGCCGGGCACTTCTACGCGGAGGGGCAGATAGTCCTGTAGCCACGGCAGT
GGGCGTGGGGGGGCTGGGGCTGGGACAAGGTTCTCTCGACGGGGGGCTGC
ATTGGTTGCGTTGAGCTTTCTTGAGGGTATGGATGTCTCAAAAGTGTGTG
CGGTGTCGGGCGGGGGTTCCAAGACATGATAAAAAGGCGCGGAGAGAGAC
TGGTGTGCAATTGCAATCGATGCTCCCACACACCGACTCGACGGCGGCCC
TTCCTAAATCTCGATGGCTTTTGTATTCCAGAACGACGTGATAATTCGAA
CGAGAGTCACGTGACGGTCCTCTTTTCCACAGTTGTCGGATTAAGCACGA
TGTTTCCCACCTTCCGTTTAAGTTGCGGTGGTTTCGGCACAGAGGAAAGG
CTGTGCAGGCGAAAAGCTCCTCACTCCAACAAAACGCGAGGTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5810975..5816917+

>mRNA_P-fluviatile_contig1.538.1 ID=mRNA_P-fluviatile_contig1.538.1|Name=mRNA_P-fluviatile_contig1.538.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1500bp|location=Sequence derived from alignment at P-fluviatile_contig1:5810975..5816917+ (Porterinema fluviatile SAG_2381)
ATGTTCTCTCGGGTGGCAAGCAAGGTGACGCTCGTACCCGTCAGGGTGGC
TGCTCTGCGTCTATCTTCTAGGGCATCAGCAGGAGCAGTGTCTGCCAAAG
CCTCCTCTGCAGCTTGCGCGGCCGCTGCGGCTGCGGCCGTTCTTGGCGGT
CTAGTGATCGCCAGCGAGAGCCAACGGAAGGCGGCTCTGTGCACCCCCTC
GTTCAAGTACACTGGAGAGCCTGGTACTGTCCACGAGAGAAGCTTCATCA
TGTTCTCTCGGGTGGCAAGCAAGGTGACGCTCGTACCCGTCAGGGTGGCT
GCTCTGCGTCTATCTTCTAGGGCATCAGCAGGAGCAGTGTCTGCCAAAGC
CTCCTCTGCAGCTTGCGCGGCCGCTGCGGCTGCGGCCGTTCTTGGCGGTC
TAGTGATCGCCAGCGAGAGCCAACGGAAGGCGGCTCTGTGCACCCCCTCG
TTCAAGTACACTGGAGAGCCTGGTACTGTCCACGAGAGAAGCTTCATCGC
CATCAAACCCGACGGCGTGCAGCGCCAGCTCGTTGGAGAGGTCATCTCTC
GCTTCGAGAAGAAGGGCTACAAGCTGGTTGCGATGAAGGCCATCAAACCC
GACGGCGTGCAGCGCCAGCTCGTTGGAGAGGTCATCTCTCGCTTCGAGAA
GAAGGGCTACAAGCTGGTTGCGATGAAGATGATCTGGCCCACCAAGGCGA
TGGCAGCCAAACACTACGCTGATGATCTGGCCCACCAAGGCGATGGCAGC
CAAACACTACGCTGACTTGTCAAAGAAGCCCTTCTTCGGAGGTTTGGTCG
ACTACTTCTGCAGCGGGCCGATCGTTGCCATGGTGTGGGAAGGGCCCGAG
GTTATCCTAACCGGCCGCAAGATGCTGGGAGCGACCAACCCTAACTCCTC
CGAACCAGACTTGTCAAAGAAGCCCTTCTTCGGAGGTTTGGTCGACTACT
TCTGCAGCGGGCCGATCGTTGCCATGGTGTGGGAAGGGCCCGAGGTTATC
CTAACCGGCCGCAAGATGCTGGGAGCGACCAACCCTAACTCCTCCGAACC
AGGTTCCCTCCGCGGGGACTACTGCATCCGCGTGGGAAGGAACTTGATCC
ACGGGAGTGATGGCGGCGAGAGCGCGCAGCACGAGATCGGCATGTGGTTC
ACAGAGGTTCCCTCCGCGGGGACTACTGCATCCGCGTGGGAAGGAACTTG
ATCCACGGGAGTGATGGCGGCGAGAGCGCGCAGCACGAGATCGGCATGTG
GTTCACAGAGGTCAATGTCGCCCGTTCTAAATTTGACCTTCATCTTTGTC
CCTTCATCCAATGGTCCGTTCAGGTCAATGTCGCCCGTTCTAAATTTGAC
CTTCATCTTTGTCCCTTCATCCAATGGTCCGTTCAGGAGGAGTGCTCCGC
GTGGCCCCGTACTCTCGACCCGTGGATCGTGGCGGACAACTAAGAGGAGT
GCTCCGCGTGGCCCCGTACTCTCGACCCGTGGATCGTGGCGGACAACTAA
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