mRNA_P-fluviatile_contig1.528.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.528.1 vs. uniprot
Match: D7FGQ6_ECTSI (Sel1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ6_ECTSI) HSP 1 Score: 259 bits (662), Expect = 6.060e-78 Identity = 181/217 (83.41%), Postives = 190/217 (87.56%), Query Frame = 1
Query: 1 MGVTKQKEGDVRGAVECYERSAKGGHAKAQHNLAAVFEKGAPGVPKDDREAVRLFRLAAEQGLAESAYSLAMHLKFGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLMYEKRRGVSPRAPEASLLEATRDCYEAXXXXXXXXXXXXXXXLHLSGRIPGREQGVALACFKKAADLGDLSGEWPSCLWNLALCYERGVGVARDPLAAEALQQLCRDRE 651
MGVTKQKEG++ GAVECY R+A+ GHAKAQHNLAA+FEKG PGV KDD EAVRLFRLAAEQGLAES+YSLAMHLKFGL XXXXXXXXXXXXXXXXXXXXXXXXXX MYEKRRGVS APE LLEATR+CYEAXXXXXXXXXXXXXXX LSGR+PGREQ AL CFK AAD GDLSG LWNLALCYERGVGVARDPLAA+ALQQ CRDRE
Sbjct: 1 MGVTKQKEGNIVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKDDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYEKRRGVSSDAPEGDLLEATRECYEAXXXXXXXXXXXXXXXXXLSGRLPGREQSEALGCFKMAADQGDLSG-----LWNLALCYERGVGVARDPLAAQALQQQCRDRE 212
BLAST of mRNA_P-fluviatile_contig1.528.1 vs. uniprot
Match: A0A6H5JPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE5_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.390e-56 Identity = 149/186 (80.11%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 1 MGVTKQKEGDVRGAVECYERSAKGGHAKAQHNLAAVFEKGAPGVPKDDREAVRLFRLAAEQGLAESAYSLAMHLKFGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLMYEKRRGVSPRAPEASLLEATRDCYEAXXXXXXXXXXXXXXXLHLSGRIPGREQGVALACFKKAADLGDLSGEWPSCL 558
MGVTKQKEG+ GAVECY R+A+ GHAKAQHNLAA+FEKG PGV K+D EAVRLFRLAAEQGLAES+YSLAMHLKFGL XXXXXXXXXXXXXXXXXXXXXXXXX MYEKRRGVS APE LLEATR+CYEAXXXXXXXXXXXXXXX LSGR+PGREQ AL FK AAD GDLSG C+
Sbjct: 1 MGVTKQKEGNAVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKNDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLGIEXXXXXXXXXXXXXXXXXXXXXXXXXXXMYEKRRGVSSDAPEEDLLEATRECYEAXXXXXXXXXXXXXXXXXLSGRLPGREQSEALGYFKMAADQGDLSGGSRVCV 186
BLAST of mRNA_P-fluviatile_contig1.528.1 vs. uniprot
Match: A0A835Z1C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C8_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.070e-21 Identity = 84/135 (62.22%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 1 MGVTKQKEGDVRGAVECYERSAKGGHAKAQHNLAAVFEKGAPGVPKDDREAVRLFRLAAEQGLAESAYSLAMHLKFGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLMYEKRRGVSPRAPEASLLEATRDCYEA 405
GVT Q+ G+ A Y R+A+ GH KAQHNLAA++EKG G+ KDDREAVRLF LAAE GLAES+YSLAMH K GL XXXXXXXXXXXXXXXXXXXXXXXXX RG++P A L+A ++CY +
Sbjct: 440 QGVTHQRHGEQAAAAAMYARAAEMGHPKAQHNLAAMYEKGVSGMAKDDREAVRLFTLAAEAGLAESSYSLAMHFKLGLGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGIAPDVLAAEALDAAKECYRS 574
BLAST of mRNA_P-fluviatile_contig1.528.1 vs. uniprot
Match: A0A1B3SNZ0_9ZZZZ (SEL-1-like domain containing protein n=1 Tax=uncultured organism TaxID=155900 RepID=A0A1B3SNZ0_9ZZZZ) HSP 1 Score: 56.6 bits (135), Expect = 1.430e-6 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 25 GDVRGAVECYERSAKGGHAKAQHNLAAVFEKGAPGVPKDDREAVRLFRLAAEQGLAESAYS 207
GD + A+ R+AK G AQ+NL ++ G GVP++DREAV+ +RLAAEQGLA + Y+
Sbjct: 35 GDYKRALPACSRAAKQGDVYAQYNLGVMYANGY-GVPENDREAVKWYRLAAEQGLAAAQYN 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.528.1 >prot_P-fluviatile_contig1.528.1 ID=prot_P-fluviatile_contig1.528.1|Name=mRNA_P-fluviatile_contig1.528.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=457bp MGVTKQKEGDVRGAVECYERSAKGGHAKAQHNLAAVFEKGAPGVPKDDREback to top mRNA from alignment at P-fluviatile_contig1:5756488..5762626+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.528.1 ID=mRNA_P-fluviatile_contig1.528.1|Name=mRNA_P-fluviatile_contig1.528.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6139bp|location=Sequence derived from alignment at P-fluviatile_contig1:5756488..5762626+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5756488..5762626+ >mRNA_P-fluviatile_contig1.528.1 ID=mRNA_P-fluviatile_contig1.528.1|Name=mRNA_P-fluviatile_contig1.528.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2742bp|location=Sequence derived from alignment at P-fluviatile_contig1:5756488..5762626+ (Porterinema fluviatile SAG_2381)back to top |