mRNA_P-fluviatile_contig1.522.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.522.1
Unique NamemRNA_P-fluviatile_contig1.522.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: D7FGS8_ECTSI (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS8_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 2.870e-148
Identity = 207/255 (81.18%), Postives = 229/255 (89.80%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEAGVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGITVKCLHTPGHTMGHICYYATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKNAF 762
            MK+I VPVL+DNFAYLL+D AGVTAA+DPAEA+KVLK A+DQGLTISKVLTTHKH DHAGGNNAIA RI GLEIVGGE +RVQGAT TV D DTL +GGI+VKC+HT GHTMGHICYYATEGE KA+FTGDTLFVGGAG+FFEG+PEEMQ SL +KL KLPPETLVYCGHEYT SNY FA S+DP+NE LKRE+ +A ER+R GEHTVPSTIAKELATNPFMRAHEPS+QAR GLG+G+TTAA LGKIR MKNAF
Sbjct:    1 MKVIVVPVLDDNFAYLLSDAAGVTAAVDPAEADKVLKVANDQGLTISKVLTTHKHHDHAGGNNAIARRITGLEIVGGEIDRVQGATRTVKDGDTLRVGGISVKCIHTSGHTMGHICYYATEGEQKAVFTGDTLFVGGAGRFFEGTPEEMQHSLGDKLGKLPPETLVYCGHEYTSSNYLFAQSLDPENEDLKREVAIASERLRKGEHTVPSTIAKELATNPFMRAHEPSIQARAGLGDGSTTAAVLGKIRKMKNAF 255          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A836CGL4_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGL4_9STRA)

HSP 1 Score: 292 bits (748), Expect = 1.200e-96
Identity = 144/258 (55.81%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEAGVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGITVKCLHTPGHTMGHICYYATE---GEDKALFTGDTLFVGGAGKFFEGSPEEMQLSLE-KLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKNAF 762
            M+++ VPVL+DN+AYLL ++     A+DPA+A KVL+AA  +G+TI+KVLTTHKH+DHAGGN+ +A  +PG+EIVGG  + V   TA V   DT++  G+T+KC+HTPGHT+GHICY+ TE   G++  +FTGD LFVGGAGKFFEG+  +M+LSL  +LA LPP T V+CGHEYTLSNY FAL++D  N  L      A+ + R+G  TVPSTI +ELATNPFMRAH  +V+A  G G G   AA L ++R  K+ F
Sbjct:    1 MRVVPVPVLSDNYAYLLINDQKEACAVDPADAAKVLEAAQQEGVTITKVLTTHKHSDHAGGNDQMAQLVPGVEIVGGALDSVAACTAPVNHGDTVAFTGMTIKCIHTPGHTVGHICYHVTERGQGDEGCVFTGDVLFVGGAGKFFEGTSADMELSLYMRLACLPPRTRVWCGHEYTLSNYEFALAVDAGNAELAAAAAEAQRQRRDGAPTVPSTIGRELATNPFMRAHTAAVRAAVGAGRGDGVAATLQRVRDAKDRF 258          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A6V1NKM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NKM9_HETAK)

HSP 1 Score: 286 bits (733), Expect = 1.990e-94
Identity = 144/257 (56.03%), Postives = 182/257 (70.82%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDE-AGVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIG-GITVKCLHTPGHTMGHICYYATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKNAF 762
            MK++ VP L+DN+AYLL DE     AA+DPAE EKVL+AA DQG++I+ VL THKH DH+GGN A+   IP +EI+GG  E V+  T  V D +   +G  +T++C+HTPGHTMGH CYYA +G+ KA+FTGDTLF+GG G+FFEG+  +M  SL  KL  LPP+T VYCGHEYTL+NYRFALS+DP+N AL+     A+  I NG +TVPSTI KELATNPFMR    ++Q +T   E       L  IR MK+ F
Sbjct:    1 MKVVPVPTLSDNYAYLLIDELTNTAAAVDPAEPEKVLRAALDQGVSITTVLATHKHWDHSGGNAAMKTSIPDVEIIGGATEGVEACTKAVEDGEQFMLGENVTIRCIHTPGHTMGHTCYYAVDGDSKAVFTGDTLFIGGCGRFFEGTARDMHPSLCLKLGALPPDTAVYCGHEYTLANYRFALSVDPENAALREAQATAQATIDNGGYTVPSTIGKELATNPFMRPDASNLQEKT---ETQNPIECLAAIRAMKDRF 254          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A7S2GMK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMK4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.140e-82
Identity = 132/255 (51.76%), Postives = 168/255 (65.88%), Query Frame = 1
Query:    4 KIICVPVLNDNFAYLLTDEA-GVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGITVKCLHTPGHTMGHICYYATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKNAF 762
            ++I +PVL DN+AYL+ D + G  A +DPAE EKVL AA+  G+ IS VLTTHKH DH+GGN  +A +IPG+ IVGG  + V+G    V D   LS G   + CL TPGHT GHI Y       K +FTGD LF+GG GKFFEG+  EM  SL EKL  L P T V+CGHEYT+SN+RFALS++P N  L+ +   A+ + + G+ TVPSTI  ELATN F+R ++ +VQ       GATT  +LG +R  KN F
Sbjct:   14 RVIPIPVLEDNYAYLIIDTSTGACACVDPAEPEKVLTAAARHGVNISMVLTTHKHWDHSGGNLEMAAKIPGVAIVGGAIDAVEGCNHPVEDGQKLSFGASQISCLLTPGHTKGHISYLVESSLSKHVFTGDVLFIGGCGKFFEGTAAEMFPSLYEKLGCLDPSTKVWCGHEYTMSNFRFALSVEPGNSELQAKAAWAESQRKEGKITVPSTIGDELATNVFLRCNKATVQVACSCRSGATTIDFLGALRNQKNRF 268          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A4D9CSI4_9STRA (Lactamase_B domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSI4_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.370e-80
Identity = 139/265 (52.45%), Postives = 172/265 (64.91%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEA-GVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIG-GITVKCLHTPGHTMGHICYYAT------EGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSLEKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAH--EPSVQARTGLG-EGATTAAYLGKIRMMKNAF 762
            M++  +P+L DN+ YL+ D+A    AAIDP E +KVL AAS  G  I+ +LTTHKH DHAGGN+ +   +P + ++GG  + V   T  V + +   IG  + V+CL TPGHTMGH+CY  T      E   +A+FTGDTLFVGGAGKFFEGSP +M  SL KL  LPPET VYCGHEYTL NY FA  +DPDN  L +    A+ +   G  TVPSTIA ELATNPFMRA   +  V A+ G      +TA+ LGKIR MKN F
Sbjct:    2 MRVKEIPMLEDNYGYLVVDDATNQAAAIDPVEPDKVLAAASKAGALITHILTTHKHWDHAGGNSEMRKLLPDVPVLGGAGDGVAACTWQVQEGEVFRIGRDLRVECLLTPGHTMGHMCYAVTDERGPEERAQRAVFTGDTLFVGGAGKFFEGSPADMLASLSKLGALPPETFVYCGHEYTLQNYAFARWLDPDNPDLAKAAAAAQAQRAEGLPTVPSTIAVELATNPFMRASALQERVVAQAGSDLRDLSTASVLGKIREMKNEF 266          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A7S2RSP0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSP0_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.520e-79
Identity = 129/253 (50.99%), Postives = 169/253 (66.80%), Query Frame = 1
Query:    4 KIICVPVLNDNFAYLLTD-EAGVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGITVKCLHTPGHTMGHICYYATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKN 756
            +++ VPVL DN++Y+L D E+G+ A +DPAE EKV++AA   G+ +S VLTTHKH DHAGGN  +A  IPG++IVGGE + V+  T  V D   L +G  T+ CL TPGHT+GHI ++        +FTGD LFVGG GKFFEG+ +EM  SL EKL  LP ET V+ GHEYT+SNY+FAL ++P+NE LK     A ++    E TVPSTI KEL TN F+R    +V+A   + E AT    LG +R  K+
Sbjct:   11 RVVPVPVLEDNYSYILIDDESGLAACVDPAEPEKVIQAAESLGVALSLVLTTHKHWDHAGGNTQMAQLIPGIDIVGGEIDEVEACTMKVSDDQELRLGETTITCLLTPGHTVGHISFFCQASACAHVFTGDVLFVGGCGKFFEGTAQEMYPSLYEKLGVLPVETQVWPGHEYTVSNYKFALQVEPENEELKDAAQWASDQRSRNEFTVPSTIGKELQTNVFLRCSCAAVKAFCQVPEDATVTDTLGMLRARKD 263          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A822ESB2_9NEOB ((mimic poison frog) hypothetical protein n=5 Tax=Hyloidea TaxID=8417 RepID=A0A822ESB2_9NEOB)

HSP 1 Score: 251 bits (640), Expect = 1.620e-79
Identity = 128/251 (51.00%), Postives = 166/251 (66.14%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEAGVTAAI-DPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGITVKCLHTPGHTMGHICYYATE---GEDKALFTGDTLFVGGAGKFFEGSPEEM-QLSLEKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGK 738
            MKI  +P L DN+ YLL DE    AAI DP + +KV++A    G+ ++ VLTTH H DHAGGN  +   + GL++ GG+  RV   T TV    T  +G + VKCL+TP HT GHICYY T+    E  A+FTGDTLFV G GKFFEG+ EEM Q  +E L +LPPET VYCGHEYT++N +FA  ++P+NEA+K+++  AKE   NGE T+PST+++EL  NPFMR  E SVQ   G     +T A + K
Sbjct:   53 MKIELLPALTDNYMYLLIDEETKEAAIVDPVQPQKVVEAVKKHGVNLTSVLTTHHHWDHAGGNEKLVKMVSGLKVYGGDS-RVGALTQTVSHLTTFQVGSLQVKCLYTPCHTSGHICYYVTKPNSSEPPAVFTGDTLFVAGCGKFFEGTAEEMYQALIEILGRLPPETRVYCGHEYTINNLKFARHVEPNNEAIKQKLAWAKETYNNGEPTIPSTLSEELTFNPFMRVREKSVQQHAGADNPISTMAAIRK 302          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A833QYC1_9POAL (Hydroxyacylglutathione hydrolase cytoplasmic-like isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QYC1_9POAL)

HSP 1 Score: 248 bits (633), Expect = 3.340e-79
Identity = 128/257 (49.81%), Postives = 171/257 (66.54%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEAGVTA-AIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGG-ITVKCLHTPGHTMGHICYYAT--EGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKN 756
            MKI+ VP L DN+AYL+ DE    A A+DP E EKVL AAS+ G  +  VLTTH H DHAGGN  +A  +PG+++ GG  + V+G T  V + D LSIG  I + CLHTP HT GH+ YY T  + ED A+FTGDTLF+ G GKFFEG+ E+M  SL   L  LP  T VYCGHEYT+ N +FAL+++P+NE +K++++ A+E+   GE T+PST+  E  TNPFMR   P +QA+ G     +    +G++R  K+
Sbjct:    1 MKIVPVPCLEDNYAYLIVDETTKEAVAVDPVEPEKVLLAASEIGADVKSVLTTHHHWDHAGGNEKMALLVPGIKVYGGSVDNVKGCTDKVENGDKLSIGKEINILCLHTPCHTKGHVSYYVTGKDEEDSAVFTGDTLFIAGCGKFFEGTAEQMYQSLCVTLGSLPKPTRVYCGHEYTVKNLQFALTVEPENEKIKQKLSWAQEQRHKGEPTIPSTLEDEFETNPFMRVDLPELQAKVG---ATSPVQAMGEMRKKKD 254          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A0A1Y1HQF8_KLENI (GLYOXALASE n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQF8_KLENI)

HSP 1 Score: 247 bits (631), Expect = 7.640e-79
Identity = 132/259 (50.97%), Postives = 173/259 (66.80%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDEAGV-TAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIG-GITVKCLHTPGHTMGHICYYATEGEDKA--LFTGDTLFVGGAGKFFEGSPEEMQLSL-EKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKNAF 762
            M+I+ VP L DN+ YL+ D+A    AA+DP E  KV  AAS +G++I+ VLTTH H DHAGGN  +  RIPG+++VGG  +RV   T  V + D +S+G G+ V+ L TP HT GHI YYAT   D+A  +FTGDTLF+GG G+FFEG+PE+M  SL   L +L P T VYCGHEYT  N  FA S++P+NEALK++    KE    G  TVPSTI  ELA NPFMR    +++A TG  +     A + K+RMMK+++
Sbjct:    1 MRIVTVPQLEDNYGYLIIDDATKEAAAVDPVEPSKVTGAASREGVSITTVLTTHHHWDHAGGNEEMVKRIPGIKVVGGAHDRVAACTHPVEEGDEVSVGKGVKVRALFTPCHTKGHISYYATGSSDEAPAVFTGDTLFIGGCGRFFEGTPEQMHRSLLGVLGRLDPATRVYCGHEYTDKNLEFAASVEPNNEALKQKAAWVKESRAQGLPTVPSTIGDELAFNPFMRVELDALKAATGETD---PVAVMAKVRMMKDSY 256          
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Match: A9NT10_PICSI (Lactamase_B domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NT10_PICSI)

HSP 1 Score: 246 bits (628), Expect = 1.910e-78
Identity = 127/257 (49.42%), Postives = 171/257 (66.54%), Query Frame = 1
Query:    1 MKIICVPVLNDNFAYLLTDE-AGVTAAIDPAEAEKVLKAASDQGLTISKVLTTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGG-ITVKCLHTPGHTMGHICYY--ATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQLSLEK-LAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERIRNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMMKN 756
            MKI+ VP L DN+AYL+ DE  G  A +DP E + +L+AA   G  I  VLTTH H DHAGGN  +   +PG+E+ GG K+ V+G T  +   D LS+G  +T+K LHTP HT GHI Y+  +T G+D A+FTGDTLF+ G GKFFEGS E+M  SL K LA LP  T V+CGHEYT+ N RFA++++P+NE +K+++N A+++ R  + TVPSTI  EL +NPFMR     ++   G     +    LG+IR MK+
Sbjct:    1 MKIVPVPCLEDNYAYLIIDEDTGEAAVVDPVEPQNILQAAEVHGANIKFVLTTHHHWDHAGGNEELKKLVPGIEVYGGAKDHVKGCTVALEHGDELSLGRTVTIKALHTPCHTKGHISYFLTSTSGDDPAVFTGDTLFIAGCGKFFEGSAEQMYQSLCKILASLPRSTQVFCGHEYTVKNLRFAMTVEPENERIKQKLNWAEQQRRENKPTVPSTIQDELESNPFMRVDRLELKELVGHN---SPVHVLGEIRQMKD 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGS8_ECTSI2.870e-14881.18Lactamase_B domain-containing protein n=2 Tax=Ecto... [more]
A0A836CGL4_9STRA1.200e-9655.81Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
A0A6V1NKM9_HETAK1.990e-9456.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2GMK4_9STRA3.140e-8251.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CSI4_9STRA1.370e-8052.45Lactamase_B domain-containing protein n=2 Tax=Mono... [more]
A0A7S2RSP0_9STRA1.520e-7950.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A822ESB2_9NEOB1.620e-7951.00(mimic poison frog) hypothetical protein n=5 Tax=H... [more]
A0A833QYC1_9POAL3.340e-7949.81Hydroxyacylglutathione hydrolase cytoplasmic-like ... [more]
A0A1Y1HQF8_KLENI7.640e-7950.97GLYOXALASE n=1 Tax=Klebsormidium nitens TaxID=1052... [more]
A9NT10_PICSI1.910e-7849.42Lactamase_B domain-containing protein n=1 Tax=Pice... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5710538..5713152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.8
Seed ortholog evalue2.3e-115
Seed eggNOG ortholog2880.D7FGS8
KEGG rclassRC00004,RC00137
KEGG koko:K01069
KEGG ReactionR01736
KEGG Pathwayko00620,map00620
GOsGO:0003674,GO:0003824,GO:0004416,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615
EggNOG free text desc.hydroxyacylglutathione hydrolase activity
EggNOG OGsCOG0491@1,KOG0813@2759
EC3.1.2.6
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-04_001020.1
Exons4
Model size765
Cds size765
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.522.1prot_P-fluviatile_contig1.522.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5710538..5713152 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815347.8193812-CDS-P-fluviatile_contig1:5710537..57107921622815347.8193812-CDS-P-fluviatile_contig1:5710537..5710792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5710538..5710792 -
1693561560.639608-CDS-P-fluviatile_contig1:5710537..57107921693561560.639608-CDS-P-fluviatile_contig1:5710537..5710792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5710538..5710792 -
1622815347.8291633-CDS-P-fluviatile_contig1:5710988..57111721622815347.8291633-CDS-P-fluviatile_contig1:5710988..5711172Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5710989..5711172 -
1693561560.6538563-CDS-P-fluviatile_contig1:5710988..57111721693561560.6538563-CDS-P-fluviatile_contig1:5710988..5711172Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5710989..5711172 -
1622815347.8459895-CDS-P-fluviatile_contig1:5711915..57121391622815347.8459895-CDS-P-fluviatile_contig1:5711915..5712139Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5711916..5712139 -
1693561560.6620984-CDS-P-fluviatile_contig1:5711915..57121391693561560.6620984-CDS-P-fluviatile_contig1:5711915..5712139Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5711916..5712139 -
1622815347.8569992-CDS-P-fluviatile_contig1:5713050..57131521622815347.8569992-CDS-P-fluviatile_contig1:5713050..5713152Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5713051..5713152 -
1693561560.6707067-CDS-P-fluviatile_contig1:5713050..57131521693561560.6707067-CDS-P-fluviatile_contig1:5713050..5713152Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5713051..5713152 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.522.1

>prot_P-fluviatile_contig1.522.1 ID=prot_P-fluviatile_contig1.522.1|Name=mRNA_P-fluviatile_contig1.522.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=255bp
MKIICVPVLNDNFAYLLTDEAGVTAAIDPAEAEKVLKAASDQGLTISKVL
TTHKHADHAGGNNAIAGRIPGLEIVGGEKERVQGATATVGDADTLSIGGI
TVKCLHTPGHTMGHICYYATEGEDKALFTGDTLFVGGAGKFFEGSPEEMQ
LSLEKLAKLPPETLVYCGHEYTLSNYRFALSIDPDNEALKREINLAKERI
RNGEHTVPSTIAKELATNPFMRAHEPSVQARTGLGEGATTAAYLGKIRMM
KNAF*
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mRNA from alignment at P-fluviatile_contig1:5710538..5713152-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.522.1 ID=mRNA_P-fluviatile_contig1.522.1|Name=mRNA_P-fluviatile_contig1.522.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2615bp|location=Sequence derived from alignment at P-fluviatile_contig1:5710538..5713152- (Porterinema fluviatile SAG_2381)
ATGAAGATAATATGTGTACCGGTACTCAACGACAACTTTGCCTACCTCCT TACGGATGAGGCTGGTGTCACGGCAGCTATCGATCCAGCGGAAGCGGAAA AGGTACTTAGGATCTCTCTAGACTCGGACAACGAGAGCCCACAAGCGTGC GGGCATCTCAGTAGAGGTGCGGCCCGCTGCTCGGAAACAAACTGTTGAGA GAAACAAGCTTTTTTTTTCATAACGAGCAAGAACAACGTGCCAAGAAGCC CGCCTCGATCTAGACCCTATCGTAAGAAACATCCCAACACGAAACACGCA TCCGACACCCCACCAAGATAAGAAACAAGCGGCGATGGAAAAATAATGCC CTCGAGTAAGAAACATCCATCCGCTGTCGGTGTGTGGAAGTAGGTGGACC ACACCCTTGACAAGGGATTGCTTCCTTGGTTGTGATGTGCGACTCGACGT TTTCACGTTTTCGTGATCGGTGGGGCGTAGCGGTGAATCACACGTACTGA AGCAGTCCGCAGGGTGTGCTTGTGCATCCGACAAGATTAGAAAAACGCAG AGCAGACAAAAAGATGCCGGATCAGGGACAGGAGCACGACTGATTTTGAA AGGTACTCCTATGATAACCAGCACGTTTTGGTAGCACGGGAAAATTAGTC TGAAGGCTCGTTATTTATCCGGGGGCAATTTATGAAAGTGAGCCTCAACC CGAATTTGACGTTTGTCAACAGCGGGCAGCGTTTGTCCATTAACGTGTTC CTGCGCAGCCTGGGGACGGTGAGCCAGTGCCCATCATCAGCGTTTTAACG CACGTGACCTGTGAATTATGATCGCTATCATCCCAGGTGTCCACTGTGAA CCAGAGGAGGAGCCGAGCATGTGTTTGGCTGGTCTTCGCTGTCTTTGTGG GTGGTCACTCCCCCCCTCCTTGATGTTTGGTCTTTCCCTCAATCGTGCCG ACTCCAGGGAAGTCTGAAGCGTATTTTCTTCCACACCTGGACACCGATTC GATGTGACTCAAGGTGCTGAAGGCAGCGAGCGATCAGGGATTGACAATCA GCAAGGTGCTCACGACTCACAAGCACGCCGACCACGCTGGCGGAAACAAC GCAATCGCTGGCCGGATTCCCGGCCTCGAGATCGTCGGCGGCGAAAAGGA AAGAGTTCAGGGTGCTACCGCCACCGTTGGCGACGCTGACACTTTATCCA TCGGGGGAATCACGGTGAAGTGCCTACACACCCCAGGGTAAGTCTCACGT AGGTAGACATGCGAAGATTAAACAAATCCTGCTCCTTTGGCCATACACCA GTTGGTGTAAACTCGGAACCTCTACTGTTGGATCGGGGAGCTCGAATATA GCGCACGACAGCAGCTTTTGAGTGCTACGGCACGCAATCTACGCGCGGAA ACGAATCGCTGAACCTCGCCTCGACGTTAAGAAATGAAGACAATGAAACT TACGGGGGGTGGGGATCGGGGACTTGGAGATGAGACTTCGGCGATAGCCT GGAACAAGATCTCCCACAGCGGGAAGGCGACGGCAGTGCTTTCTTCTGAA ATGAAGCTGACAAGGGGATGGAAAGCGTTCCTACCTTATGCCGTCTCTCC GCTTTGGCCGACGTTTGGTTTCCGGGAAGAACATCTCGTGTGAAGGATTG TTTATCTATCTTCGCAGCGTGAAGTGAGACGCTCCGATCCGGAGGAACAC AATGCCTTGCACCGCCGTGCCTCTACTTTAATCGATTGCCTTGCATTCTT GAAGCGAGGGAGGCCGAACCCGTTCTCCTCGAGTAAGTTCGTGGTAACCA CCAGCGCGGTTCAAACATGTTCAACACCACTCTGGGATTTAAAGCCGTCC CGTGACCGCCCAAGTGTGACCGAGATTACGCCGTGTCACTCCTACCCGAT GGAGATTGTTTGCTCACACCTCATCGTTTTGCCATCTTGCGTTTCCGTCT GGAACATCAATGCTGCGGCCGATATCGAAGACACACGATGGGCCACATCT GCTACTACGCAACAGAGGGGGAGGACAAGGCACTCTTTACGGGTGACACG CTATTTGTGGGCGGCGCCGGTAAATTTTTCGAGGGCAGCCCCGAAGAGAT GCAGCTGAGTCTGGAAAAACTTGCAAAACTTCCACCCGAAACGCTGGTGT ACTGCGGTCACGAGGTAGGCTGTTGCCGGAGCTGTTTTAGGAGAATCCTT TCATGGCACACGACTGCCAAACACCCTAGCTACAAGTCGCTCAGGACCCA AGCAGTAGCGCTCGCTATTTCTCAATAGTTGCTGCCGTTTGCCAAACCTC CGTTGCCATACCAAAAAGTGACCCTCCTGGCTTTCCGCCCTGTCCCTTCT CCCGCTCCAGTACACGTTAAGCAATTACCGCTTCGCTTTGAGCATCGACC CGGACAACGAAGCCCTGAAGCGTGAAATCAATCTCGCAAAAGAGCGCATC CGCAACGGCGAACACACCGTCCCATCCACGATCGCGAAAGAGCTCGCCAC GAACCCATTCATGCGAGCGCACGAACCTTCGGTGCAAGCGCGCACTGGAC TCGGGGAGGGTGCGACGACCGCCGCGTACTTGGGCAAGATCCGGATGATG AAGAATGCTTTCTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5710538..5713152-

>mRNA_P-fluviatile_contig1.522.1 ID=mRNA_P-fluviatile_contig1.522.1|Name=mRNA_P-fluviatile_contig1.522.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1530bp|location=Sequence derived from alignment at P-fluviatile_contig1:5710538..5713152- (Porterinema fluviatile SAG_2381)
ATGAAGATAATATGTGTACCGGTACTCAACGACAACTTTGCCTACCTCCT
TACGGATGAGGCTGGTGTCACGGCAGCTATCGATCCAGCGGAAGCGGAAA
AGATGAAGATAATATGTGTACCGGTACTCAACGACAACTTTGCCTACCTC
CTTACGGATGAGGCTGGTGTCACGGCAGCTATCGATCCAGCGGAAGCGGA
AAAGGTGCTGAAGGCAGCGAGCGATCAGGGATTGACAATCAGCAAGGTGC
TCACGACTCACAAGCACGCCGACCACGCTGGCGGAAACAACGCAATCGCT
GGCCGGATTCCCGGCCTCGAGATCGTCGGCGGCGAAAAGGAAAGAGTTCA
GGGTGCTACCGCCACCGTTGGCGACGCTGACACTTTATCCATCGGGGGAA
TCACGGTGAAGTGCCTACACACCCCAGGGTGCTGAAGGCAGCGAGCGATC
AGGGATTGACAATCAGCAAGGTGCTCACGACTCACAAGCACGCCGACCAC
GCTGGCGGAAACAACGCAATCGCTGGCCGGATTCCCGGCCTCGAGATCGT
CGGCGGCGAAAAGGAAAGAGTTCAGGGTGCTACCGCCACCGTTGGCGACG
CTGACACTTTATCCATCGGGGGAATCACGGTGAAGTGCCTACACACCCCA
GGACACACGATGGGCCACATCTGCTACTACGCAACAGAGGGGGAGGACAA
GGCACTCTTTACGGGTGACACGCTATTTGTGGGCGGCGCCGGTAAATTTT
TCGAGGGCAGCCCCGAAGAGATGCAGCTGAGTCTGGAAAAACTTGCAAAA
CTTCCACCCGAAACGCTGGTGTACTGCGGTCACGAGACACACGATGGGCC
ACATCTGCTACTACGCAACAGAGGGGGAGGACAAGGCACTCTTTACGGGT
GACACGCTATTTGTGGGCGGCGCCGGTAAATTTTTCGAGGGCAGCCCCGA
AGAGATGCAGCTGAGTCTGGAAAAACTTGCAAAACTTCCACCCGAAACGC
TGGTGTACTGCGGTCACGAGTACACGTTAAGCAATTACCGCTTCGCTTTG
AGCATCGACCCGGACAACGAAGCCCTGAAGCGTGAAATCAATCTCGCAAA
AGAGCGCATCCGCAACGGCGAACACACCGTCCCATCCACGATCGCGAAAG
AGCTCGCCACGAACCCATTCATGCGAGCGCACGAACCTTCGGTGCAAGCG
CGCACTGGACTCGGGGAGGGTGCGACGACCGCCGCGTACTTGGGCAAGAT
CCGGATGATGAAGAATGCTTTCTGATACACGTTAAGCAATTACCGCTTCG
CTTTGAGCATCGACCCGGACAACGAAGCCCTGAAGCGTGAAATCAATCTC
GCAAAAGAGCGCATCCGCAACGGCGAACACACCGTCCCATCCACGATCGC
GAAAGAGCTCGCCACGAACCCATTCATGCGAGCGCACGAACCTTCGGTGC
AAGCGCGCACTGGACTCGGGGAGGGTGCGACGACCGCCGCGTACTTGGGC
AAGATCCGGATGATGAAGAATGCTTTCTGA
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