mRNA_P-fluviatile_contig1.519.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.519.1
Unique NamemRNA_P-fluviatile_contig1.519.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: D7G7B3_ECTSI (1-aminocyclopropane-1-carboxylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B3_ECTSI)

HSP 1 Score: 702 bits (1811), Expect = 9.170e-242
Identity = 383/574 (66.72%), Postives = 433/574 (75.44%), Query Frame = 2 
Query:  533 GLLVLGGVVVLVVATLRRLWEHHAASSRGAAVPSKRSLELTRGDTPAHIIEHIARLGDPDYICLAIAENKLTVGPLLEKLDELAA---------KTPRKSEKQQQSRPATISSSSSMALNMAGDSTDIDSAEE-----STTTSTRTSGGGTDPIPS--------------------------STLSVRSASRLASMGYGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNVAGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKERVAA 2134
            GL  L  V+   +  + R    H + +R  +  SKRS ELTRG TPAHI+EHIARLGDPDYICL+IAENKLTVGPLL+KL E +          + PR+   ++ S    I+S ++  LN+AGDS+D+DSA E     +  T+T       D  P+                          ST    S+ RLASMGYGEVRGP WVR+ +A+MMG RMFHR DDVDPDNVVIAAGATSVLRLLV+ALTE G+GCLIPGPYFPGFDKVLN+AGVRAWV NRDP        A G GG+EGGVD+GI PRVL+++LRRAR++GVEIR LLITSPHNPTGR+YSPKALL+AV+WGR RG  I+ DEVYANC+HRPNA FRSVG LL  DG      GMG DVH+LYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAH SQASSDTMD+VG L R   FLDDYF +HQEGLR AYMS+VNQLG++GIMY QAEAGLFVMLDLRE+LE  SKEAEE+LWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEAL  ER AA
Sbjct:   20 GLTSLVAVLAYRIGVIER--RRHLSGARWRS--SKRSAELTRGGTPAHILEHIARLGDPDYICLSIAENKLTVGPLLDKLREFSVTAAQFRGVGEPPRR---RRASITTAITSDNNRGLNVAGDSSDVDSAGEGAALGAVATATTPPARPVDISPADISTAGAVVASPVVMGEPAHSTISSTSTAVAPSSHRLASMGYGEVRGPLWVRREIAEMMGRRMFHR-DDVDPDNVVIAAGATSVLRLLVVALTEEGEGCLIPGPYFPGFDKVLNIAGVRAWVANRDP--------AEGGGGVEGGVDDGIFPRVLETALRRARSSGVEIRVLLITSPHNPTGRMYSPKALLSAVSWGRRRGLQIVVDEVYANCIHRPNASFRSVGGLLMADGA----AGMGGDVHVLYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHASQASSDTMDLVGRLFREPSFLDDYFTQHQEGLRLAYMSLVNQLGRKGIMYQQAEAGLFVMLDLREYLEVPSKEAEERLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALATERAAA 573
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A2T7DSB0_9POAL (Aminotran_1_2 domain-containing protein n=11 Tax=Panicoideae TaxID=147369 RepID=A0A2T7DSB0_9POAL)

HSP 1 Score: 217 bits (553), Expect = 1.040e-58
Identity = 131/383 (34.20%), Postives = 202/383 (52.74%), Query Frame = 2 
Query: 1004 YGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKERVAAVELDQ 2149
            + +  G +  R+A+A  M E++   +   DPD +V+ AGAT+   LL   L   G   LIP PY+PGFD+ L    GV    V+ D            A G +      ++   LQ++   A AAG+ +RA+L+T+P NP G       L   + +   +  H+I+DE+Y+  V     L  SV  L+      G+   +   VHI+Y LSKDLG+ G+RVGV+YS N  VV    +M+  +  SS T   +  +     F   Y + ++E LRA +  +V  L + G+  L+  AGLFV +D+R  L  ++   E +LW +ML   K+N++PG + HC EPGWFRLCFA   +D +  A+ R++ F++   KER  + + +Q
Sbjct:   99 FQDYHGLKAFRKAMASFM-EKIRGGKASFDPDRIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVHCDS-----------ANGFQ------VTVAALQAAYEEAEAAGMRVRAVLLTNPSNPLGTTVKRSVLEDVLDFVSRKNIHLISDEIYSGSVFAAPDLV-SVAELVEARARRGDGAAVAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTTARRMSSFTLVSSQTQKTLAAMLADDAFAAAYIRTNRERLRARHDHIVAGLARAGVPCLRGNAGLFVWMDMRRLLGEATVAGELRLWDRMLREVKLNISPGSSCHCSEPGWFRLCFANMSLDTLDVALARMSRFMDRWNKERTMSTQNEQ 462
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: UPI0019993C35 (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019993C35)

HSP 1 Score: 214 bits (545), Expect = 3.890e-58
Identity = 137/371 (36.93%), Postives = 194/371 (52.29%), Query Frame = 2 
Query:  998 MGYGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNVAGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCV--HRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFL 2104
            +GY  + G    R+A+A  MG     R   ++   + + AGA +VL LL  AL + G G L+P P + GF   L +      V      A G                  ++   L +++  A    V ++ALL T+P+NPTGR+YS + LL  +AWG  RG H++ DE+YA  V   RP   F S  SL         R  +G   HI++  SKD G +G R GVL+SEN EV+  V ++A+ +  S  T  ++  L   T  +D +  R + GLR A   ++ +L   GI YL AEAG FV+ DLR FL + + +AE  LWR++++   VNLTPGGA   VEPG+FRLC+A    D +  A DRI   L
Sbjct:   72 LGYDAMIGNLGFREALAGFMGRAFLGRT--IEAGQLAVVAGAGAVLELLFYALADDGDGVLVPTPSYAGFWPDLQLRDRLRIVPVHCSSATGFT----------------LTTADLDAAMDGAE---VPVKALLFTTPNNPTGRVYSREELLEILAWGERRGLHVVFDEIYALSVFGERP---FVSAASL---------RPVLGERAHIVWAFSKDFGASGLRCGVLFSENAEVLRAVDQLAYWAACSGHTQHLLAQLVADTDSVDPWIDRMRAGLREACAHVMTRLDALGIPYLPAEAGFFVVCDLRGFLAAPTWDAEHALWRRLVDEANVNLTPGGACRIVEPGFFRLCYAAVPADAIDVAFDRIGAML 409
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A2G5F8T7_AQUCA (Aminotran_1_2 domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5F8T7_AQUCA)

HSP 1 Score: 214 bits (545), Expect = 9.660e-58
Identity = 125/369 (33.88%), Postives = 194/369 (52.57%), Query Frame = 2 
Query: 1004 YGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLE 2107
            Y +  G    R+A+A  M E++       DPD VV+ AGAT+   LL   L + G   L+P PY+PGFD+ L    GV+   ++ D                    +  I+P+ L+ +  +A+A  +++R +LIT+P NP G       L   + +   +  H+++DE+Y+  V  PN  F SV  +L+              VHI+Y LSKDLG+ G+RVG +YS N +VV    +M+  S  SS T  ++  +   T F D+Y K ++E LR  Y  ++  L + GI  L+  AGLF  ++L  FL++ ++E E  +W  ++   K+N +PG + HC EPGWFR+CFA      +  A+ RI DF+E
Sbjct:   92 YQDYHGLETFRKAMASFM-EKIRGGRAKFDPDRVVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHTDSTN-----------------NFRITPQALEEAYSKAQAQNIKVRGVLITNPSNPLGAAVEKSVLEEILEFVTHKNIHLVSDEIYSGSVFCPNE-FVSVAEILHA-----RNYKDAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFSLVSSQTQHLLASMLSDTKFTDNYIKTNRERLRKRYEFIIEGLRKSGIECLKGNAGLFCWMNLSPFLDTPTREGELAIWDSIMHEVKLNTSPGSSCHCSEPGWFRVCFANMSQQTLEVALKRIHDFME 436
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: K3XHJ7_SETIT (Aminotran_1_2 domain-containing protein n=5 Tax=Panicoideae TaxID=147369 RepID=K3XHJ7_SETIT)

HSP 1 Score: 214 bits (545), Expect = 1.230e-57
Identity = 131/380 (34.47%), Postives = 201/380 (52.89%), Query Frame = 2 
Query: 1004 YGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKERVAAVE 2140
            + +  G +  R+A+A  M E++   +   DPD +V+ AGAT+   LL   L   G   LIP PY+PGFD+ L    GV    V+ D            A G +      ++   LQ++   A AAG+ +RA+L+T+P NP G      AL   + +   +  H+I+DE+Y+  V     L  SV  L+   G      G+   VHI+Y LSKDLG+ G+RVGV+YS N  VV    +M+  +  SS T   +  +     F   Y + ++E LRA +  +V  L + G+  L+  AGLFV +D+R  L  ++   E +LW +ML   K+N++PG + HC EPGWFR+CFA   +D +  A+ R++ F++   KER  + +
Sbjct:  100 FQDYHGLKAFRKAMASFM-EKIRGGKARFDPDRIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVHCDS-----------ANGFQ------VTAAALQAAYEEAEAAGMRVRAVLLTNPSNPLGTTVKRSALEGVLDFVIRKNIHLISDEIYSGSVFAAPDLV-SVAELVESRG-----AGVAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMSSFTLVSSQTQKALAAMLADDAFAAAYIRTNRERLRARHDYIVAGLARAGVPCLRGNAGLFVWMDMRRLLGEATVAGELRLWDRMLREVKLNISPGSSCHCSEPGWFRVCFANMSLDTLDVALARMSRFMDRWNKERAMSTQ 455
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A4V4H7X0_MUSBA (Aminotran_1_2 domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4V4H7X0_MUSBA)

HSP 1 Score: 217 bits (552), Expect = 1.700e-57
Identity = 127/360 (35.28%), Postives = 196/360 (54.44%), Query Frame = 2 
Query: 1031 VRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAY---QQVDVVSRAVDRIAD 2098
            ++ AVA+ MG+ M       DP  +++ AGAT  + +L   L + G   L+P PY+PG+D+ +   AG+    V                       + G+S   L+ +  +A+  GV++RA+L ++P NP G L   +AL   + +   +G H+IADEV+A   H     F S+  +LN D     R      VHI+YGLSKDL V G+R+G++YS N+ V+A  SK+A  S  S  T  ++  +   T F+  Y K ++E LR  Y  +VN L Q GI  +++  G +   D+ +F++S S++ E +LW++ML   K++LTPG A HC+EPGWFRLCF     + V VV   + R+ D
Sbjct:  238 LKMAVAEFMGQVM-QGSVSFDPSQIIMTAGATPAIEILSFCLADAGNAFLVPSPYYPGYDRNIRWRAGIELIPVP-----------------CRSTDNFGLSIPALERAYNQAKMRGVKVRAVLFSNPSNPVGNLLHREALRDLLDFVTEKGIHVIADEVFAGSTHGTED-FVSMAEVLNTDEFDRSR------VHIVYGLSKDLSVPGFRIGLIYSFNEHVIAAASKLARFSSVSVPTQHLLISMLNDTKFITQYIKTNRERLRVMYALLVNGLKQLGIESVKSSGGFYCWTDMSKFMKSYSEKGELELWKEMLNVAKIHLTPGTACHCIEPGWFRLCFTTLTEKDVPVVLERIKRVVD 572
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: UPI00053C09C6 (1-aminocyclopropane-1-carboxylate synthase 6 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C09C6)

HSP 1 Score: 214 bits (546), Expect = 2.140e-57
Identity = 121/346 (34.97%), Postives = 187/346 (54.05%), Query Frame = 2 
Query: 1091 DPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRD-VHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKE 2122
            DPD +V++ GAT     L   + + G   L+P PY+PGFD+ L    G++ W V               + G +      I+   L+++ R AR + V ++ LLIT+P NP G       L + V +   +  H+IADE+YA    +    F SV  +++      E +   RD +HI+Y LSKD+G+ G+RVG++YS N +VV    KM+     SS T  M+  +     F+D++ +  ++ L      +   L   GI  L+  AGLF+ +DLR  LESS+ EAE +LWR ++ + K+N++PGG+FHC EPGWFR+CFA    + +  A++RI  F+    KE
Sbjct:  119 DPDRIVMSGGATGAQETLAFCIADPGDAFLVPTPYYPGFDRDLRWRTGLKLWPVV-----------CHSSNGFK------ITVEALEAAYREARESNVPVKGLLITNPSNPLGTTLDRDCLKSLVNFTNGKNIHLIADEIYAATTFQ-QPEFTSVAEIID------EVSDCNRDLIHIVYSLSKDMGLPGFRVGIIYSYNDQVVNAARKMSSFGLVSSQTQHMMSKMLSDDNFVDEFLRESKQRLAERCAELTTGLKDLGIGCLKGNAGLFLWMDLRNLLESSTFEAETELWRVIVHKVKLNVSPGGSFHCTEPGWFRVCFANMSHETMEIALERIRTFMRLREKE 440
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A835DAY1_9MAGN (Aminotran_1_2 domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DAY1_9MAGN)

HSP 1 Score: 212 bits (540), Expect = 4.040e-57
Identity = 125/369 (33.88%), Postives = 194/369 (52.57%), Query Frame = 2 
Query: 1004 YGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLE 2107
            + +  G +  R+A+A  M E++       DPD VV+ AGAT+   LL   L + G   L+P PY+PGFD+ L    GV+   V+                      +  I+P+ L+++  RA A  +++R LLIT+P NP G       L   + +   +  H+++DE+Y+  V   ++ F S+  +L       +       VHI+Y LSKDLG+ G+RVG +YS N +VV    +M+  S  SS T  ++  +   T F ++Y K ++E LR  Y S++  L   GI  L+  AGLF  ++L   LE+ ++E E  LW  +L   K+N++PG + HC EPGWFR+CFA      +  A+ RI DF+E
Sbjct:   89 FQDYHGLKSFRKAMASFM-EQIRGGRAKFDPDRVVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPVH-----------------CNSSNNFQITPQALEAAYNRAEAMNIKVRGLLITNPSNPLGAAIDRPVLEEILNFITQKNIHLVSDEIYSGSVFS-SSEFVSIAEILEA-----QNYKNSERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFSLVSSQTQHLLASMLSDTKFTENYIKTNRERLRKRYESIIEGLRNAGIECLKGNAGLFCWMNLSPLLENPTREGELTLWNSILHEVKLNISPGSSCHCSEPGWFRVCFANMNQQTLEVALKRIHDFME 433
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A4Y7K4G4_PAPSO (Aminotran_1_2 domain-containing protein n=7 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7K4G4_PAPSO)

HSP 1 Score: 211 bits (537), Expect = 1.220e-56
Identity = 128/377 (33.95%), Postives = 202/377 (53.58%), Query Frame = 2 
Query: 1004 YGEVRGPRWVRQAVADMMGERMFHREDDV--DPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNV-AGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRD-VHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKE 2122
            + +  G +  R+A+A  MG+    R D+V  DP+ VV+ AGAT+   LL   L   G   L+P PY+PGFD+ L    GV+   V+                      +  ++P+ L+ + + A +  +++R LLIT+P NP G     K L   + +   +  H+++DE+Y+  V   +  F SV  +L       ER     + VHI+Y LSKDLG+ G+RVG +YS N +VV    +M+  S  SS T +++  +   T F ++Y K ++E L+  Y  +++ L + GI  L+  AGLF  ++L  FL+SS+KE+E  LW  M+   K+N++PG + HC EPGWFR+CFA    + +   + RI  F+E    E
Sbjct:   98 FQDYHGLQSFRKAMASFMGKI---RSDEVKFDPERVVLTAGATAANELLTFILANPGDALLVPTPYYPGFDRDLRWRTGVKIVPVH-----------------CNSSNNFQVTPQALEDAYKEAESKNIKVRGLLITNPSNPLGIAMERKVLEEILDFVTHKNIHLVSDEIYSGSVFS-STEFVSVAEILE------ERNYKDAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFSLVSSQTQNLLAAMLSDTMFTENYIKINRERLKKRYQLIIDGLRKAGIECLEGNAGLFCWMNLSPFLKSSTKESELILWNSMVNEVKLNISPGSSCHCDEPGWFRVCFANMSEETLQVVLKRIYKFMETYQNE 447
[Close]
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Match: A0A662DIS2_9ACTN (Aminotran_1_2 domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DIS2_9ACTN)

HSP 1 Score: 209 bits (533), Expect = 3.790e-56
Identity = 121/370 (32.70%), Postives = 197/370 (53.24%), Query Frame = 2 
Query:  995 SMGYGEVRGPRWVRQAVADMMGERMFHREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLNVAGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARAAGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCVHRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVLYSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLRAAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFL 2104
            S+ Y  + G + +R+ +A    E ++ R   VDPD V++ AG  S+L  L   ++  G G L+P P + G+   L        V       +G                  +SP +L+S+   A   GV + ALLIT+P NPTGR+   K + AA+ W R    H++ +E+YA  VH     +  VG +++          +  DVH ++G SKD  ++G R GV+ S N +V+  +S++A+ S  S DT  ++  + R T + + Y +  +  LR +Y    + L    I Y+  +AGLF++ D+R F++ ++ +AE++LWR++L+   VNLTPG A H  EPG+ R+CFA +  +VV+RA+ R A  L
Sbjct:   96 SVAYDAMIGSQNLREQIASFASEHVWGRS--VDPDRVIVLAGGGSILETLFYVISSPGDGVLVPTPSYAGYWADLETRDNLKVVPVHTSSEDGFK----------------LSPALLESAYIDA---GVPVSALLITNPDNPTGRMMPSKDMNAAIQWARSHDLHVVVNEIYALSVHGDEP-YEPVGRVIDN---------LATDVHEVWGFSKDFAMSGLRCGVMTSNNTDVLDAISELAYWSLVSGDTQHLLAGMLRNTEWTETYLREMRSRLRRSYDVTTSALDAADIPYVDGDAGLFLLADMRRFMDEATWDAEDRLWRKVLDEAAVNLTPGSACHIGEPGFMRICFATEPPEVVARAISRFAAIL 434
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7B3_ECTSI9.170e-24266.721-aminocyclopropane-1-carboxylate synthase n=2 Tax... [more]
A0A2T7DSB0_9POAL1.040e-5834.20Aminotran_1_2 domain-containing protein n=11 Tax=P... [more]
UPI0019993C353.890e-5836.93Aminotransferase class I/II-fold pyridoxal phospha... [more]
A0A2G5F8T7_AQUCA9.660e-5833.88Aminotran_1_2 domain-containing protein n=2 Tax=Th... [more]
K3XHJ7_SETIT1.230e-5734.47Aminotran_1_2 domain-containing protein n=5 Tax=Pa... [more]
A0A4V4H7X0_MUSBA1.700e-5735.28Aminotran_1_2 domain-containing protein n=2 Tax=Mu... [more]
UPI00053C09C62.140e-5734.971-aminocyclopropane-1-carboxylate synthase 6 n=1 T... [more]
A0A835DAY1_9MAGN4.040e-5733.88Aminotran_1_2 domain-containing protein n=1 Tax=Te... [more]
A0A4Y7K4G4_PAPSO1.220e-5633.95Aminotran_1_2 domain-containing protein n=7 Tax=Pa... [more]
A0A662DIS2_9ACTN3.790e-5632.70Aminotran_1_2 domain-containing protein (Fragment)... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5687955..5697833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score218.0
Seed ortholog evalue1.4e-53
Seed eggNOG ortholog218851.Aquca_001_00119.1
Preferred nameACS7
KEGG rclassRC00021,RC01124
KEGG koko:K01762
KEGG ReactionR00179
KEGG Pathwayko00270,ko01100,ko01110,map00270,map01100,map01110
KEGG ModuleM00368
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009692,GO:0009693,GO:0009987,GO:0010817,GO:0016053,GO:0016829,GO:0016846,GO:0016847,GO:0018871,GO:0019752,GO:0032787,GO:0042218,GO:0042445,GO:0042446,GO:0042802,GO:0043436,GO:0043449,GO:0043450,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:1900673,GO:1900674,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.1-aminocyclopropane-1-carboxylate synthase
EggNOG OGs37MAV@33090,3GCFZ@35493,COG0436@1,KOG0256@2759
EC4.4.1.14
COG Functional cat.E
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categorysignal anchor
Exons10
Model size2548
Cds size2076
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815347.3313594-UTR-P-fluviatile_contig1:5687954..56884261622815347.3313594-UTR-P-fluviatile_contig1:5687954..5688426Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5687955..5688426 +
1693561560.4315052-UTR-P-fluviatile_contig1:5687954..56884261693561560.4315052-UTR-P-fluviatile_contig1:5687954..5688426Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5687955..5688426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815347.3403738-CDS-P-fluviatile_contig1:5688426..56887021622815347.3403738-CDS-P-fluviatile_contig1:5688426..5688702Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5688427..5688702 +
1693561560.443511-CDS-P-fluviatile_contig1:5688426..56887021693561560.443511-CDS-P-fluviatile_contig1:5688426..5688702Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5688427..5688702 +
1622815347.3488398-CDS-P-fluviatile_contig1:5688985..56893741622815347.3488398-CDS-P-fluviatile_contig1:5688985..5689374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5688986..5689374 +
1693561560.4526465-CDS-P-fluviatile_contig1:5688985..56893741693561560.4526465-CDS-P-fluviatile_contig1:5688985..5689374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5688986..5689374 +
1622815347.3571167-CDS-P-fluviatile_contig1:5691063..56912851622815347.3571167-CDS-P-fluviatile_contig1:5691063..5691285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5691064..5691285 +
1693561560.4611642-CDS-P-fluviatile_contig1:5691063..56912851693561560.4611642-CDS-P-fluviatile_contig1:5691063..5691285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5691064..5691285 +
1622815347.3673406-CDS-P-fluviatile_contig1:5692056..56922011622815347.3673406-CDS-P-fluviatile_contig1:5692056..5692201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5692057..5692201 +
1693561560.4706671-CDS-P-fluviatile_contig1:5692056..56922011693561560.4706671-CDS-P-fluviatile_contig1:5692056..5692201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5692057..5692201 +
1622815347.3768468-CDS-P-fluviatile_contig1:5693410..56935661622815347.3768468-CDS-P-fluviatile_contig1:5693410..5693566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5693411..5693566 +
1693561560.4807482-CDS-P-fluviatile_contig1:5693410..56935661693561560.4807482-CDS-P-fluviatile_contig1:5693410..5693566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5693411..5693566 +
1622815347.386093-CDS-P-fluviatile_contig1:5693874..56940241622815347.386093-CDS-P-fluviatile_contig1:5693874..5694024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5693875..5694024 +
1693561560.4899178-CDS-P-fluviatile_contig1:5693874..56940241693561560.4899178-CDS-P-fluviatile_contig1:5693874..5694024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5693875..5694024 +
1622815347.3944743-CDS-P-fluviatile_contig1:5694499..56946281622815347.3944743-CDS-P-fluviatile_contig1:5694499..5694628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5694500..5694628 +
1693561560.4996297-CDS-P-fluviatile_contig1:5694499..56946281693561560.4996297-CDS-P-fluviatile_contig1:5694499..5694628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5694500..5694628 +
1622815347.489972-CDS-P-fluviatile_contig1:5695292..56954091622815347.489972-CDS-P-fluviatile_contig1:5695292..5695409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5695293..5695409 +
1693561560.5093665-CDS-P-fluviatile_contig1:5695292..56954091693561560.5093665-CDS-P-fluviatile_contig1:5695292..5695409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5695293..5695409 +
1622815347.5044236-CDS-P-fluviatile_contig1:5697290..56976261622815347.5044236-CDS-P-fluviatile_contig1:5697290..5697626Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5697291..5697626 +
1693561560.5189142-CDS-P-fluviatile_contig1:5697290..56976261693561560.5189142-CDS-P-fluviatile_contig1:5697290..5697626Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5697291..5697626 +
1622815347.5128973-CDS-P-fluviatile_contig1:5697677..56978331622815347.5128973-CDS-P-fluviatile_contig1:5697677..5697833Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5697678..5697833 +
1693561560.5287576-CDS-P-fluviatile_contig1:5697677..56978331693561560.5287576-CDS-P-fluviatile_contig1:5697677..5697833Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5697678..5697833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.519.1prot_P-fluviatile_contig1.519.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5688427..5697833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.519.1

>prot_P-fluviatile_contig1.519.1 ID=prot_P-fluviatile_contig1.519.1|Name=mRNA_P-fluviatile_contig1.519.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=692bp
MSPAPKGDGTNHPQHETGAGGLLVLGGVVVLVVATLRRLWEHHAASSRGA
AVPSKRSLELTRGDTPAHIIEHIARLGDPDYICLAIAENKLTVGPLLEKL
DELAAKTPRKSEKQQQSRPATISSSSSMALNMAGDSTDIDSAEESTTTST
RTSGGGTDPIPSSTLSVRSASRLASMGYGEVRGPRWVRQAVADMMGERMF
HREDDVDPDNVVIAAGATSVLRLLVIALTERGQGCLIPGPYFPGFDKVLN
VAGVRAWVVNRDPGAEGIGGGARGAGGLEGGVDEGISPRVLQSSLRRARA
AGVEIRALLITSPHNPTGRLYSPKALLAAVAWGRLRGFHIIADEVYANCV
HRPNALFRSVGSLLNGDGGGGERTGMGRDVHILYGLSKDLGVAGWRVGVL
YSENKEVVAMVSKMAHTSQASSDTMDMVGHLCRATGFLDDYFKRHQEGLR
AAYMSMVNQLGQRGIMYLQAEAGLFVMLDLREFLESSSKEAEEKLWRQML
ERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALVKE
RVAAVELDQLRRQQQQQQQQQHQQWRRQPQLLKAASSAAAAALSFASAVI
RRATRPAAGAAEAKNRESATARRSTSMSSWVDGPPQARRRGFRSRENKAS
GAGARASEGEHEGGRGGGAVQPGSESSGSCERRPVVDTVPW*
back to top

mRNA from alignment at P-fluviatile_contig1:5687955..5697833+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.519.1 ID=mRNA_P-fluviatile_contig1.519.1|Name=mRNA_P-fluviatile_contig1.519.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9879bp|location=Sequence derived from alignment at P-fluviatile_contig1:5687955..5697833+ (Porterinema fluviatile SAG_2381)
TCGCCATTAACTCCTTCTCTCTTTCGTGCTGTACGAGAAGATTGAGACCA
GGGGATGCGATCAAAACCTTGAAGTATTTTTTTGCAACGTGCGTGTTTGT
GTCGACGTCAACCGCTTTCCCTGGCGACGTAGGCTCACATGCGTGTACTA
CTACACAGCACTCACGCACACACACACCCCGGAGGTGTGGTCTCCTCCCC
GTTCTTCTGTTAGTTCGTAGATGGTGAGAAGCTTTTTGGAGCAGAGAGCC
GGCGCAGCGTACGAAGACAACGAACGCGCGAAGGAGCTAAGAAGCACTTA
CACCAGCCGCCGACAAACGATCGGGTGTGGTGAACCCACACAGCAGTAGC
TTGTTGCCTTCGGCGCAGCAGCAGCAGAGGGAGAGAGAGCAGGGCAACCT
CTCTCCCTCTCTTTCGTTCTGCAGCGACATCAACAACAGCAAAGGCAACC
GGCAGTATCGGCTGTCAAAAACATGTCGCCGGCGCCCAAGGGAGATGGGA
CTAATCATCCACAACACGAAACAGGGGCGGGTGGACTTCTCGTGCTGGGA
GGCGTGGTCGTCCTCGTGGTGGCCACACTCCGACGGCTCTGGGAGCACCA
TGCCGCCAGCAGCAGAGGGGCGGCCGTGCCCTCGAAGAGGTCCCTCGAGC
TCACGAGGGGCGACACCCCAGCGCACATCATCGAGCACATCGCGAGGCTC
GGCGATCCGGACTACATCTGCCTCGCCATCGCGGAGAACAAGCTTACGGT
GAGAGGTCGAGCGAGGGACAGGATACTTCACCGTTGTATTGACGACAATC
TGCTGGATGTTGAATGCGTTGTACACAAAACATGCTCCCGCGGTTGCAGT
GGCAAATTTGTAGGCACTTCTTGAGGGTTTGGTTATATGTTAATATGGTG
TGCTCTTTTACAGATCCCTTCCCCTCTTTCGCTCCTACTCTCACGCTCCC
CTCTCCCTCTTTCTCCCCTCCCTTTCGCTCTACCTCCCCCCTTCCTGTGT
CGCTCTCTCGCTCTCAACCCTGCCGCCGCAGGTGGGCCCCCTGCTGGAGA
AGCTCGACGAGCTCGCCGCCAAAACCCCCCGGAAGAGCGAAAAGCAGCAG
CAGTCCCGACCCGCTACCATCTCGAGCAGCAGCAGCATGGCCCTGAACAT
GGCCGGCGACAGTACCGACATTGACTCCGCGGAGGAGTCGACCACTACCT
CCACGCGCACCTCTGGCGGCGGCACGGACCCGATACCTTCGTCGACGCTC
TCGGTGAGATCGGCGTCCAGGCTTGCTTCCATGGGCTACGGGGAGGTGCG
GGGGCCCCGGTGGGTGAGGCAGGCCGTGGCCGATATGATGGGCGAGCGCA
TGTTTCACCGGGAGGATGACGTCGACCCCGACAACGTGGTCATCGCCGCG
GGGGCAACGTCGGTCTTGAGGTAAGCTGGCGGATGATTTGATTTCTTTCC
CTCCCCAAGAAAAGTACGGCGAACAGCAGGCAGAGGAAAAGAGAGATTTG
TCGCGTTGTAGATTGTGCCTTTTAGAAATTGACGGTCTGATGGTTTGACT
CCAGCTTCTGCAGCCTGTAGGCATGCACAACCAACATACCGGGGGAAGGG
AAGCGGAGAGGGGCACCGACAAGCGAGAGAGTCGAAGTCAACAGCGGAGG
AGGAGGGGAGTTGCGAGAGGAAAAGGGAAGAAGAGCAGGCGTACGATCAG
GACAAGGAAGACGACGAAGAGGAGCAACAATGGAGGGAACTGAAAAGGGG
CTTAATCTCCAGAGAGAAGCAGGATTATCTCTCGGCTTTTTATGAATCTG
CGCTCCATGGTTCTCTGCCGCGCATTGACTTTGTATGCCACACCTGTTAG
CGAAGCGAGCAATGTCATCGTATGAAGGCTTTGCTTCGAACGCGTCCCAT
GGCCACGCACTTTCTGCCTCCCCCCCGAACGACCCTCCCTCCCGCTGGCT
CTCACCTCGGTGTTTGCCATCGGTATTGGGTTTTCGTCGCTTGGCAACGA
CGTTGTAAAACAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCG
TCTTTTTTATCCCTCTGTTTTTTTTGGCGGTAACCATAATGGTGGTCGAG
AAGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATG
ATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACAC
AGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAACAAACTAAGC
CATACGCAGCTGTCGTCCGTATGCAAGGAAGCAAGCACAAGATGCCGAAC
ACCCTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATACCTCA
CGGCGTTTCGCGCTTGGTGGTGTGAGAGCCTGGTCCGGCGAGAACCCGGC
GTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTTTAACGACTA
CGGCATGCACGACTATGAGTACACCCCCGAACGACCGATGAATCGCACCC
TTTTTCTTCGTTTGAAACACGATCTTCGTTGCTTCCCCTCTTTCCCCCCC
GTTTCGTGTTTGTTTTGCGCTGGAGACGGTGCTCCTTTTTTTTTTCATGT
GCACAACTACCGGTCGCCCCGGTGGTCAAGTTGGTATCCTCGTAACCTTC
TAGCACCGAGGGGTTCGAATCTCGGCGAGAGTGTTTTTTTCTCACTTTCG
TACATGGGAGTAGAAAGCGGTGAAAGCTGAAAAGCTTCATGAGTGCACAA
AATTCGACGAAGCGGTCGACGAGGGAAAGGGACGGCTGAACCCTTCTCGC
GAAAAAAAATGAAGGCAAGCACCGCAGGAGGAAGGTGGGGCACAAAAGAA
AAACAATAAGAAGAAAAAAGTCCCGGTGTTTACCCCCTCCTGTGTGGCCC
CGGTTGGTTCTAGCTGGACAGAAAAGTAAACTGAAAACGTGTGGTCCTTC
AAATACGCTGCAACGTGTAGTACACGTCTCGCCTTGATCGGAGGGAGTGT
CGCCAATAAAGTGACGAAATTACACACACACACAAAGACACAACGGAGGT
CCCAATCCCCTTCTCCCCCTCATTTCCCCCCTATATCATCCTCGCTGCAC
GCGAATCAGGTTGCTCGTCATAGCGCTGACTGAGAGAGGGCAGGGGTGCC
TCATACCTGGCCCCTACTTCCCGGGGTTCGACAAGGTGCTTAACGTCGCG
GGCGTGAGAGCATGGGTGGTGAACAGAGACCCAGGCGCGGAGGGGATTGG
GGGGGGAGCACGAGGAGCGGGCGGCCTGGAGGGTGGGGTGGACGAGGGAA
TTTCCCCCCGCGTGCTGCAGAGCAGCCTGCGGTAAGGCCTAAAGCGGTCG
GCGTGGCCCTGCTGTCGATTTGTGTGTGGCGTCTGTTGTGTTAAGAAGGA
GCGGTGTTTGTGTGCGCGACTGGAGTGCTAATCGTCTTGTTTCCGTGGCG
ACCGCTTCGACGGACCTCATGAAGGATTGAAGCATGTATGTAGTAAAAAC
GAAGTTCGCGGGAGGAGGTGCAGGATGAGGAGGAGGAAGTGGACGGTTGG
CATGCTTTCTTCTTCCTGAATGTCCGCAAGGTGTGTCAACTCGCTGTCAT
TTCGTTCGAAAAAATCCCGCCCCTTTTGCAGTTGGAAGGCGATTCGGTAG
CCGGTACCGCGCAATTCTCGCCTCGCGGGGGAAGTATGCCGAAGCCTTAG
CGTGCTTCTTTCCAAATTGCTCGTTGAGTTTGTAAGGGGAAAAGGCAGGA
CGCCGCACAAGCGGACTTGGTTTCGCCGCAAATTACTTGTTTGTTCCATG
TATGGTGCACGATTTTCTGCGTGCGTGCTTGATTTTTTTTTTCTAAATTT
GTTGTTCGGGAACCTTTTGTTTCCTGTTTTCCGGCTGTCGTTTGTCTCTT
TGTTATTTTGTTTCAAATTGCGCTCTGCTCCCCAGTTGTGCGCTGTGATT
GTTGCTGTTCTTCTGCTTCTCTGCTTCTTCTGCTGCTGGTGGTACTGCTG
CTGCCGCTGCTGATGCTCCTTTGGCGGCTGATTTCGCTGCTTTTCCTTCA
CAATATTCCTCTCCCCGCTGCCCTCGTCGTTTTGTCTGGCCCTCTCCCGC
AGGCGCGCGAGAGCAGCTGGCGTGGAGATCCGAGCGCTGCTCATCACCTC
CCCCCACAATCCGACGGGGAGGTTGTACTCGCCCAAGGCTCTCCTCGCCG
CCGTCGCGTGGGGGCGGTTGCGGGGCTTTCACATAATCGCGGATGAGGTA
ATTGTCGACATGAGAACCGGAAAACGATACCATCCCTTTTGGGGATCTTC
TTGGCGTGCGTCTGTAAACGCATGTGTCGCCAATGTACGTGTGTTTGTGG
GTCCTCTGTTCCCGTTCGTTGTCGCTTTTGGGAAACCAGAAAAAGCAGCT
TTTAAGGAATCACATCAGGACGAAGAAACGAACAAACAAGATAAAGCGGG
AGTTCTTGCCAAAGTTTTGTTTGCGTTTTTTTTGTGTTTCGGTATGTTTT
TAGCGGGTGAATTTCGAGACCAACATGTGAATGCCGGAGCGAGGAGAGAC
CTGCCTTTCTTTGTTTGGTACGGAAGGCGATCGGCTGGGATAGGTCGGTG
CAGGCATTCGAAGGTACCGTGAGGTGTCTGCAAAGGTTTGCGATGGTAAC
TCGTCGTCAACAACAACCACAAGACTGCCGAACAATCCGTTTCCACGGCC
GATTCGAGCTCCGAGGAGGGCCGAAATCGATTTTTTTTTTTACTTGACGC
TTTGTCGAAAATACGCGTACAGGTAACAAATATTTTTTTTTAATAATTTG
AGATGTTTCCGCTCTCCTGTGTGCCGAGTACCGGCCATAACAAGGTACAA
GTGATGATCAAGATTTGTCCGCTCTGCTGTGTCAAACGCCAAACATTTTG
AGGTACAAGTGGTACACAAGATTTGTCCGCTCTGCTGTGCCGAACATCAA
CCATTTTGAGCTACAAGTGGTACACAAGAGTTGACTGCTCTCCTTGACGA
ACACCAAACATTTTCAGCTACAAAGCGGCACACAAGAGTTGACTGCTCTT
CTTACCAAACACCAACCATCACAGGTCAAGAGGTACCCTCCGCTCTCAAT
CTTGTTCAAATAGGCGGTGCATCGTGGGTCGCAGTGGGTAGCGTTGGGGC
TGTTGTTCACCCGCTCCTGCAAACAAAAATAAGAAGGGCAGGATTAAGCT
CGCGTCACCGCCTTACAAGTAGCTAAGCTCAACGTGTCTTGCCTACCCCG
CCTCGTCCATTCCCCATCCTTTCGAGAGGACGACCCCTGGTGGTGTCCCT
CCCACAGCGGGACGCTGCTTCCAAGGATTTCAACCCTCGCGCCCCCTTTT
TCCATCTTTTTCCCGTCCCGGTCAAGCGTTTCCTGTCTCTGCGTTTGTCC
GACCTGCGTGTGGGTTCCGTGGTCGGGGTGGGTGGGGGGCTCCGTGGTTT
CTCAAGGTGTACGCGAACTGCGTGCACAGGCCCAACGCTTTGTTCCGCAG
CGTGGGGAGCCTCCTGAACGGGGACGGCGGCGGCGGAGAGCGGACAGGGA
TGGGGAGGGACGTGCACATCCTGTACGGGCTGTCCAAGGACCTCGGAGTC
GCCGGGTGGAGGGTGAGCGAGCTTCGCACGCGAGGTTTGGTGGGCCTTCA
AGGGCGGAGGAGGGATACGTTGAGATCTCGGTATTTTGTGGCGTCCCGCG
TGTGCACTTGGCAGAAGGCCCGTATCTGCACCGCACAAAGTATGGCCATC
CTCCTGTGCTGTTGCGCGATGATTGGCGTCCAAACCGAAGATTCTGTTGA
AGGCAGTTCGATGCTCTCTCCTTGCAGAAATTTTCGATTTTGAAGAGAAA
ATGAAACACTGTTTGCATCTATTTAGGTCAACCCTTTTTTTGTCCCTTTC
GGTTTTGTGAAAATCCTTAGGTTGGCGTGCTCTACAGCGAAAACAAGGAG
GTGGTTGCCATGGTGTCCAAGATGGCCCACACCTCCCAAGCCTCGTCGGA
TACGATGGACATGGTGGGGCACCTGTGCCGGGCGACGGGGTTCCTCGACG
ACTACTTCAAGCGGCACCAGGCAAGAAACCCACCAACATTTCTGGATTGT
AGAGAAGAATAAAGAAATGGTGCAATGCAAAAAAAGAAAATGGTAAAAGG
CGTCATAACAAAAAAAAAGGCTTTGCGTAGCTTCCTAGATCATCGCGATC
ATGTCAATCGAGCGCGGGCCTGGCTCGTTGACCGTTGCTTGAAGGTCCGT
TTGCATCCGCTGTCGCCCGTGTACGCCAACCTTGAGCACACCACGGGCCG
ATTCGAGGACCGACGGGTAGGCGTCCAGCGGTCGGTGACCCCAGTTTGCA
TGTCCCATCGGCACGAAACGATCGCACAAGAAGCGAGGCACTCATCCTTC
CTTAGCGTCGCATGCACTTACAGTTTCGAATGCGCCGTTCGTTTTTTTTA
TTCTCTTTGTTTGGGACCGCCGTTCTTGTCGCCCCTTGCCCCTTGCGTGT
GATGCTTTTGTTTCGCTGTTCTCGCTTTTGATATCCTGTTTTCAGGAGGG
TCTGAGGGCGGCTTACATGTCGATGGTGAACCAGCTTGGGCAGAGAGGAA
TCATGTACCTCCAGGCCGAGGCGGGGCTATTCGTTATGCTGGATCTGAGA
GAGTTCCTAGAGAGCTCATCCAAGGTGAGGGTGACTGCAAACATCTAGCA
TGTCGATAAACGGAACCCTGTCTAAACCATTTCTTCTCCCGCCATAACGC
CTTTGTCGTTTGGAATTCGTCTTGTAAGCACACACGTTTGAACCCAGTTA
GACATGCAACGACAGATTGACAGAAATTGGTGGACGTTTGTTTGGACTCG
TGGGCGATTCTGCTTTCGATCTTCGAATAGGCACACCCAGAATCTAACCG
AAAACGACGAGGCAGTGAAATCGCTTTCACATACCATGAAGGAGGACCAG
AAGCCAGTACTTCGCGCTCTGTCGTTCGGGATTAACTCGATGCCGTGGCT
CGGCCAGCCATTGGTAGGCGGCTCTTCGACATGCTGGAGGCATGCAGATG
AGGCTTATGCTCGAGGCAATCAGATGAGACTTGCGTCTGCTAGAGCAACA
CCATATGTCTTACCGATGGATGGGTGCATGCTCTCAACCTGACAAACACA
TACGCCGACGTGGAGTGTCATTTCCATCAGTAGTCGATGTCGGCCCTCTC
TCTCTCGCGCGCGCGCGAGCGCTCTCGATTTCGCTCTCTCGATCTCGCTC
TCTCTCGGTTTCACACAACCCAGTCAAGCGTTACCACCGGTCAAGCGTGC
ACACAGCTCCCACTTCATCCTTACAACTTATACTCCAGGAGGCGGAAGAG
AAGCTGTGGCGGCAGATGCTGGAGCGCACGAAGGTCAACCTCACCCCCGG
AGGAGCCTTCCACTGCGTCGAGCCCGGCTGGTTTCGGCTGTGCTTCGCGT
ACCAGGTGGGTGTTCCAGGATGCCCGTACTGTGGAAGGCACAGCATATCT
TCTCGTTGAATGCACAGCATATCCGCCGAGCTAGGTGTTCCAGGATGCCC
ATACTGTTGAACGCTCAGCAAACCTTTGGCTGAATGCACAGCATAGCCAC
TGAGATCGGTGTTCCAGGATGCCCGTACTGTTGAAAGCACAGCATACCTT
TTGTTGAATGCGCTGAATAGCCGCTGAGCTGGTACCGGGTGGGTATTCCA
GAGTGTCCGCACTCTAAAATGCACAGCATATCCACTGAGCTGTATGTTGA
ATGTTTGATTCAAAATATGTTTGTACTTTGATTCAGCAGGGGGGGGGGTC
TACGGTGCGGGGGTGGGACGGGAATTTCAGTCTGAACTACACCTCAGCCG
CCATCCGTAGTGGTAAAAGGGGGTTAAACATGATTTGGTGCTCTTGGAAG
TATGTGAGAGCTTTCATGCGGATTGATTTTACTCGCACTATACCGGGGAC
CCGCACTAGTCAACTCACACAGTATGGAGCCTCCCACTGTACCCTCCGAG
TTCCAGAAACTGCGCGGAATGCTTCGCCCGTTCCGCTAAACTCGCTCTTT
CGACCTTTGCGGGGAAGCTTGCCTATAACGGGGTCGCTGGCCGCAAGGGT
TTGCCTCCGCGAGGTCCTAGGGGGCGTGACGAAGCCGTCTCCCGCTCCTT
CCCCGTCTTGCTGGCCTGCTGCCGGCCTCGAATGGAGAGCTGTTCGTCCG
TGTACTCCCTCCAAAAAACAGCATGAAGATTCCCTTTCTCTTCACTCTCG
CTTGTCACAAGACGGAGAGGTTTCCATGGCGCTTCCTTCGCCGGGAGCAT
CGGCACTTGCGGCCGTACTCCTGGACTTGACGTGTAGCATACGGGTTATT
ACGGTGTGGCGTTCAGGATTCTGCGGAATATTACCACCCCCTGCCCGATT
TCGCCCCCCTCCCCCCGGCTCTCACCTCGGTGTTTGCCATCGGGATTGGG
TTTTCGTCGCTTGGCAACGACGTTGTAAAACAACCAATTCACTTCGTGAA
CTCGGCAACCAGGTTACCGTCTTTTTTATTCCTCTGTTTTTTTTTGGCGG
TAACCATAATGGTGGTCGAGAAGATCATGTTGTGCGGGGTGGAGCCCTCA
CTCCGCGCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCA
CCCTCGAGGCAATTACACAGTGCTTACAACTGTCTCTGGACGTGAAGCAC
GAGAAAACAAACTAAGCCATACGCAGCTGTCATCCGTATGCAAGGAAGTA
AGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCGCACCCTTCATGCG
ACTCGCCGAATACCTCACGGCGCTTCGCGCTTGGTGGTGTGAGAGCCTGG
TCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGT
CAATGGTCTAACGACTACGGCATGCACGACTATGAGTACACCCCCCTGCC
CGACTTCAAAAGCTTGATTGTTGAGCGATCGAGCTTGTGCTGATGCTTGA
CGACGCGTTTTCTGAAATTTCTCGATGACACATCTCCAACGCCAGCCTTC
TCCAACGCCAGCCTTATCGGCCTTGCACTCATCCGACTGTGGGGCTTTCC
AGTTCAGAACATCGCCGCAGGGGGTCTGTTACACTCCGTAGAATCGGCGG
TATAGATCGATGACGTGTGGCCTAAGTGTGGCAATTACCACGATTCAGCC
AACGGCTTCACAGGAATTTGTTGATCGCGTTCCTCCTGTCCGCCGGCCTC
GCGACATTCAAATCCCTTAATAACTCGGCCTCTCGCTCTCTCGCTCGTCT
TTTTTCCCCTGGCGCTGTCTTTCTTTCCTTTCTCAGCAAGTGGACGTCGT
CTCTCGGGCCGTCGACCGCATCGCCGACTTCCTGGAAGCCCTCGTGAAGG
AGCGGGTAGCCGCCGTAGAGCTGGACCAGCTTAGACGGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCATCAGCAGTGGCGGCGGCAACCGCAGTTGCTGAA
GGCGGCCTCCTCCGCCGCAGCGGCCGCGCTGTCGTTCGCGTCGGCGGTGA
TACGGCGTGCCACGCGCCCCGCAGCCGGCGCGGCGGAGGCAAAGAATCGA
GAGAGCGCCACAGCTCGGAGATCGACGAGCATGAGTTCGTGGGTCGACGG
ACCACCACAGGCGAGGAGACGAGTTCGTAGCAGCATCAGCGGCGGAGGCA
GCTCGGGAATCGCAGCACGAGAGGGATTTCGCAGTCGGGAGAACAAGGCC
TCGGGGGCGGGGGCGAGGGCGAGCGAGGGTGAGCATGAGGGAGGGCGCGG
AGGAGGAGCGGTGCAGCCGGGGTCAGAGTCGAGTGGGTCGTGCGAACGCC
GCCCTGTGGTGGACACCGTGCCATGGTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:5687955..5697833+

>mRNA_P-fluviatile_contig1.519.1 ID=mRNA_P-fluviatile_contig1.519.1|Name=mRNA_P-fluviatile_contig1.519.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4152bp|location=Sequence derived from alignment at P-fluviatile_contig1:5687955..5697833+ (Porterinema fluviatile SAG_2381)
ATGTCGCCGGCGCCCAAGGGAGATGGGACTAATCATCCACAACACGAAAC
AGGGGCGGGTGGACTTCTCGTGCTGGGAGGCGTGGTCGTCCTCGTGGTGG
CCACACTCCGACGGCTCTGGGAGCACCATGCCGCCAGCAGCAGAGGGGCG
GCCGTGCCCTCGAAGAGGTCCCTCGAGCTCACGAGGGGCGACACCCCAGC
GCACATCATCGAGCACATCGCGAGGCTCGGCGATCCGGACTACATCTGCC
TCGCCATCGCGGAGAACAAGCTTACGATGTCGCCGGCGCCCAAGGGAGAT
GGGACTAATCATCCACAACACGAAACAGGGGCGGGTGGACTTCTCGTGCT
GGGAGGCGTGGTCGTCCTCGTGGTGGCCACACTCCGACGGCTCTGGGAGC
ACCATGCCGCCAGCAGCAGAGGGGCGGCCGTGCCCTCGAAGAGGTCCCTC
GAGCTCACGAGGGGCGACACCCCAGCGCACATCATCGAGCACATCGCGAG
GCTCGGCGATCCGGACTACATCTGCCTCGCCATCGCGGAGAACAAGCTTA
CGGTGGGCCCCCTGCTGGAGAAGCTCGACGAGCTCGCCGCCAAAACCCCC
CGGAAGAGCGAAAAGCAGCAGCAGTCCCGACCCGCTACCATCTCGAGCAG
CAGCAGCATGGCCCTGAACATGGCCGGCGACAGTACCGACATTGACTCCG
CGGAGGAGTCGACCACTACCTCCACGCGCACCTCTGGCGGCGGCACGGAC
CCGATACCTTCGTCGACGCTCTCGGTGAGATCGGCGTCCAGGCTTGCTTC
CATGGGCTACGGGGAGGTGCGGGGGCCCCGGTGGGTGAGGCAGGCCGTGG
CCGATATGATGGGCGAGCGCATGTTTCACCGGGAGGATGACGTCGACCCC
GACAACGTGGTCATCGCCGCGGGGGCAACGTCGGTCTTGAGGTGGGCCCC
CTGCTGGAGAAGCTCGACGAGCTCGCCGCCAAAACCCCCCGGAAGAGCGA
AAAGCAGCAGCAGTCCCGACCCGCTACCATCTCGAGCAGCAGCAGCATGG
CCCTGAACATGGCCGGCGACAGTACCGACATTGACTCCGCGGAGGAGTCG
ACCACTACCTCCACGCGCACCTCTGGCGGCGGCACGGACCCGATACCTTC
GTCGACGCTCTCGGTGAGATCGGCGTCCAGGCTTGCTTCCATGGGCTACG
GGGAGGTGCGGGGGCCCCGGTGGGTGAGGCAGGCCGTGGCCGATATGATG
GGCGAGCGCATGTTTCACCGGGAGGATGACGTCGACCCCGACAACGTGGT
CATCGCCGCGGGGGCAACGTCGGTCTTGAGGTTGCTCGTCATAGCGCTGA
CTGAGAGAGGGCAGGGGTGCCTCATACCTGGCCCCTACTTCCCGGGGTTC
GACAAGGTGCTTAACGTCGCGGGCGTGAGAGCATGGGTGGTGAACAGAGA
CCCAGGCGCGGAGGGGATTGGGGGGGGAGCACGAGGAGCGGGCGGCCTGG
AGGGTGGGGTGGACGAGGGAATTTCCCCCCGCGTGCTGCAGAGCAGCCTG
CGGTTGCTCGTCATAGCGCTGACTGAGAGAGGGCAGGGGTGCCTCATACC
TGGCCCCTACTTCCCGGGGTTCGACAAGGTGCTTAACGTCGCGGGCGTGA
GAGCATGGGTGGTGAACAGAGACCCAGGCGCGGAGGGGATTGGGGGGGGA
GCACGAGGAGCGGGCGGCCTGGAGGGTGGGGTGGACGAGGGAATTTCCCC
CCGCGTGCTGCAGAGCAGCCTGCGGCGCGCGAGAGCAGCTGGCGTGGAGA
TCCGAGCGCTGCTCATCACCTCCCCCCACAATCCGACGGGGAGGTTGTAC
TCGCCCAAGGCTCTCCTCGCCGCCGTCGCGTGGGGGCGGTTGCGGGGCTT
TCACATAATCGCGGATGAGGCGCGCGAGAGCAGCTGGCGTGGAGATCCGA
GCGCTGCTCATCACCTCCCCCCACAATCCGACGGGGAGGTTGTACTCGCC
CAAGGCTCTCCTCGCCGCCGTCGCGTGGGGGCGGTTGCGGGGCTTTCACA
TAATCGCGGATGAGGTGTACGCGAACTGCGTGCACAGGCCCAACGCTTTG
TTCCGCAGCGTGGGGAGCCTCCTGAACGGGGACGGCGGCGGCGGAGAGCG
GACAGGGATGGGGAGGGACGTGCACATCCTGTACGGGCTGTCCAAGGACC
TCGGAGTCGCCGGGTGGAGGGTGTACGCGAACTGCGTGCACAGGCCCAAC
GCTTTGTTCCGCAGCGTGGGGAGCCTCCTGAACGGGGACGGCGGCGGCGG
AGAGCGGACAGGGATGGGGAGGGACGTGCACATCCTGTACGGGCTGTCCA
AGGACCTCGGAGTCGCCGGGTGGAGGGTTGGCGTGCTCTACAGCGAAAAC
AAGGAGGTGGTTGCCATGGTGTCCAAGATGGCCCACACCTCCCAAGCCTC
GTCGGATACGATGGACATGGTGGGGCACCTGTGCCGGGCGACGGGGTTCC
TCGACGACTACTTCAAGCGGCACCAGGTTGGCGTGCTCTACAGCGAAAAC
AAGGAGGTGGTTGCCATGGTGTCCAAGATGGCCCACACCTCCCAAGCCTC
GTCGGATACGATGGACATGGTGGGGCACCTGTGCCGGGCGACGGGGTTCC
TCGACGACTACTTCAAGCGGCACCAGGAGGGTCTGAGGGCGGCTTACATG
TCGATGGTGAACCAGCTTGGGCAGAGAGGAATCATGTACCTCCAGGCCGA
GGCGGGGCTATTCGTTATGCTGGATCTGAGAGAGTTCCTAGAGAGCTCAT
CCAAGGAGGGTCTGAGGGCGGCTTACATGTCGATGGTGAACCAGCTTGGG
CAGAGAGGAATCATGTACCTCCAGGCCGAGGCGGGGCTATTCGTTATGCT
GGATCTGAGAGAGTTCCTAGAGAGCTCATCCAAGGAGGCGGAAGAGAAGC
TGTGGCGGCAGATGCTGGAGCGCACGAAGGTCAACCTCACCCCCGGAGGA
GCCTTCCACTGCGTCGAGCCCGGCTGGTTTCGGCTGTGCTTCGCGTACCA
GGAGGCGGAAGAGAAGCTGTGGCGGCAGATGCTGGAGCGCACGAAGGTCA
ACCTCACCCCCGGAGGAGCCTTCCACTGCGTCGAGCCCGGCTGGTTTCGG
CTGTGCTTCGCGTACCAGCAAGTGGACGTCGTCTCTCGGGCCGTCGACCG
CATCGCCGACTTCCTGGAAGCCCTCGTGAAGGAGCGGGTAGCCGCCGTAG
AGCTGGACCAGCTTAGACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAT
CAGCAGTGGCGGCGGCAACCGCAGTTGCTGAAGGCGGCCTCCTCCGCCGC
AGCGGCCGCGCTGTCGTTCGCGTCGGCGGTGATACGGCGTGCCACGCGCC
CCGCAGCCGGCGCGGCGGAGGCAAAGAATCGAGAGAGCGCCACAGCTCGG
AGATCGACGAGCATGAGTTCGTGGGTCGACGGACCACCACAGGCGAGGAG
ACGACAAGTGGACGTCGTCTCTCGGGCCGTCGACCGCATCGCCGACTTCC
TGGAAGCCCTCGTGAAGGAGCGGGTAGCCGCCGTAGAGCTGGACCAGCTT
AGACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCAGTGGCGGCG
GCAACCGCAGTTGCTGAAGGCGGCCTCCTCCGCCGCAGCGGCCGCGCTGT
CGTTCGCGTCGGCGGTGATACGGCGTGCCACGCGCCCCGCAGCCGGCGCG
GCGGAGGCAAAGAATCGAGAGAGCGCCACAGCTCGGAGATCGACGAGCAT
GAGTTCGTGGGTCGACGGACCACCACAGGCGAGGAGACGAGGATTTCGCA
GTCGGGAGAACAAGGCCTCGGGGGCGGGGGCGAGGGCGAGCGAGGGTGAG
CATGAGGGAGGGCGCGGAGGAGGAGCGGTGCAGCCGGGGTCAGAGTCGAG
TGGGTCGTGCGAACGCCGCCCTGTGGTGGACACCGTGCCATGGTGAGGAT
TTCGCAGTCGGGAGAACAAGGCCTCGGGGGCGGGGGCGAGGGCGAGCGAG
GGTGAGCATGAGGGAGGGCGCGGAGGAGGAGCGGTGCAGCCGGGGTCAGA
GTCGAGTGGGTCGTGCGAACGCCGCCCTGTGGTGGACACCGTGCCATGGT
GA
back to top