mRNA_P-fluviatile_contig1.495.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: D7G7A4_ECTSI (Similar to chromodomain helicase DNA binding protein 4 isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A4_ECTSI) HSP 1 Score: 850 bits (2197), Expect = 1.300e-278 Identity = 540/789 (68.44%), Postives = 581/789 (73.64%), Query Frame = 1
Query: 217 GASKDIFLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFREDADDAENNGQDAVEEAGASAGGGEPESTQTRAEKKWGDGSHRGRKVSQWTDEAVDQLLDRVAAADXXXXXXXXXXXXXXXXXXXXXTSTALGSLLQTFKVASFAQVEAPAEAGDGADDADERRVQERGRGGEXXXARPXXXXXXXXXXXXXXXGKRAPMDMEGDGSEGPAAAAXXXXGGD--LLPGGPALFGERPADSGAGWEEILGKSYKEHQTVQAARLGRGKREKTQVRPYAAGSDDDNDAYGFASRRNLLGEDGELEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EAGDGPPAKKTRHRQRDSPIEILETTEGVKTILRGISRFGVPGGDWRPCMQVVVANSRLHLALSFAEENVASAVPFLQSALKKALQADYPHAAGKRRDLLSRIAAMELVFRKLEECKGKPFDIQDKLCGAYIAETRDWAGQQQQQPPPWSRENDRSLLIGLLKHGTGRLQAIVQDDALGLRSALEVALAAGDGSGPSWQLVWGDDGPTGPPGFKGSPEWNFVKRRLHILEKALVDEHQYRTGKEALHKELKTLLSRKQDMLDPNDQRIEMLMGRVKAAQECEVPGLAGRLAAIEAFQATADEVTEMRRRQEDARKRLTDAFSAMSAYIQRYRCQESEFDLGPALMNPMADCI 2559
G+ KDIFLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFRE+ DD E G E QTRAE KWGDGSHRGRKVSQWTDEAVDQLLDR A A+ +S ALGSLLQTFKVASFAQVEAPAE E V E G P MD+ GDG E AAA GG+ +LPGGPALFGERPADSGAGWEEIL KSYKE QT QAARLGRGKREKTQVRPYAA +D++D G + EE XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX EA G P KKTRHRQRDSPIE+LETTEG+KTI+R ++RFGVP GDWRPCM+ VV NSRLHL +FA + + A PFLQSALKKAL+ DYPHAAGKRR+LLSRIAAMELVFRKL+ECKGKPFDIQDKLCG YI + + ++ WSRENDRSLLIGLLKHG R QA+VQDD LGLR ALE+ALA G G+ SWQL WG+DGPTG PGFKGSPEW +VK RL +LE+ALVDEHQYR GK +L +ELKTLL+R Q L PNDQRIE L+ VKAAQE EVP L RLAAIE FQA ++VT MRRRQEDARKRLT AFSAMSAYIQRYRCQESEFDLG ALMNPMAD +
Sbjct: 1179 GSDKDIFLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFREEPDD-EAEGXXXXXXXXXXXXDNEK---QTRAE-KWGDGSHRGRKVSQWTDEAVDQLLDRSAVAEEEAGATRGEGGDGAAS-----SSNALGSLLQTFKVASFAQVEAPAED-------PEVEVAEEGGPATSSGRHPGSSRRESAGTGDQDASSAVDMDVSGDGKEEDGAAA----GGEDAVLPGGPALFGERPADSGAGWEEILAKSYKEQQTSQAARLGRGKREKTQVRPYAA-EEDEHDPTNHGXXXXXXGSLRQGEEGXXXXXXXXXXXXXXXXXXDEYGSEQPDAEFEPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAGAPVKKTRHRQRDSPIEVLETTEGIKTIVRCVTRFGVPDGDWRPCMEAVVTNSRLHLDPAFARD-IGPAKPFLQSALKKALEPDYPHAAGKRRELLSRIAAMELVFRKLQECKGKPFDIQDKLCGVYINQAKGGGLEE------WSRENDRSLLIGLLKHGNSRYQAMVQDDTLGLRPALELALAGGGGA--SWQLAWGEDGPTGQPGFKGSPEWKYVKDRLLLLERALVDEHQYRQGKASLERELKTLLARHQQSLGPNDQRIEQLIASVKAAQEREVPELVTRLAAIEEFQAAGEKVTAMRRRQEDARKRLTQAFSAMSAYIQRYRCQESEFDLGAALMNPMADYL 1936
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A6H5JZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW8_9PHAE) HSP 1 Score: 831 bits (2146), Expect = 9.640e-272 Identity = 551/872 (63.19%), Postives = 600/872 (68.81%), Query Frame = 1
Query: 217 GASKDIFLFFLSTKAGGQ---------------------GINLATADTVIIYDSDWNPHNDLQALARAHRIGQANK-------------VMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ----EQLNLVIKYGAEDLFREDADDAENNGQDAVEEAGASAGGGEPESTQTRAEKKWGDGSHRGRKVSQWTDEAVDQLLDRVAAADXXXXXXXXXXXXXXXXXXXXXTSTALGSLLQTFKVASFAQVEAPAEAGDGADDADERRVQERGRGGEXXXARPXXXXXXXXXXXXXXXGKRAPMDMEGDGSEGPAAAAXXXXGGDLLPGGPALFGERPADSGAGWEEILGKSYKEHQTVQAARLGRGKREKTQ----VRPYAAGSDDDNDAY----GFASRRNLL-GEDGELEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGDGPPAKKTRHRQRDSPIEILETTEGVKTILRGISRFGVPGGDWRPCMQVVVANSRLHLALSFAEENVASAVPFLQSALKKALQADYPHAAGKRRDLLSRIAAMELVFRKLEECKGKPFDIQ--DKLCGAYIAETRDWAGQQQQQPPPWSRENDRSLLIGLLKHGTGRLQAIVQDDALGLRSALEVALAAGDGSGPSWQLVWGDDGPTGPPGFKGSPEWNFVKRRLHILEKALVDEHQYRTGKEALHKELKTLLSRKQDMLDPNDQRIEMLMGRVKAAQECEVPGLAGRLAAIEAFQATADEVTEMRRRQEDARKRLTDAFSAMSAYIQRYRCQESEFDLGPALMNPMADCIAEVQEKHAAVRSLHRENKQLDIDFDETLKRYVMSVKDFVNKH 2685
G KDIFLFFLSTKAGGQ GINLATADTVIIYDSDWNPHNDLQALARAHRIGQANK VMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ EQLNLVIKYGAEDLFRE+ DD E+ KV Q EAVDQLLDR A A+ +S ALGSLLQTFKVASFAQVEAPAE E V E G MD+ GDG E A +LPGGPALFGERPADSGAGWEEIL KSYKEHQT QAARLGRGKREKTQ VRPYAA +D++DA G +S +L GE+G XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXEA G P KKTRHRQRDSPIE+LETTEG+KTI+R ++RFGVP GDWRPCM+ VV NSRLHL +FA + + A PFLQSALKKAL+ DYPHAAGKRR+LLSRIAAMELVFRKL+ECKGKPFDIQ DKLCG YI + + ++ WSRENDRSLLIGLLKHG R QA+VQDD LGLR ALE+ALA+G G+ SWQL WG+DGPTG PGFKGSPEW FVK RL +LE+ALVDEHQYR GK +L +ELKTLL+R Q L PNDQRIE L+ VK AQE EVP L RLAAIE FQA ++VT MRRRQEDARKRLT+AFSAMSAYIQRYRCQESEFDLG ALMNPMADCIAEVQ+KHA VR+LH+ENK LD++FD+TL RYV SV+DFV KH
Sbjct: 1058 GGDKDIFLFFLSTKAGGQARKGAPQLATSEPHTSVVIDVGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKARFLVRRLTCLNEVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQAQFLEQLNLVIKYGAEDLFREEPDD---------------------EAEGXXXXXXXXXXXXDNDKV-QAAHEAVDQLLDRSAVAEEEAGATRGDGGDGAAS-----SSNALGSLLQTFKVASFAQVEAPAED-------PEVEVAEGGGPATSSGRHRGSSRRESAGTGDQDPYSAVDMDVSGDGKEEDGAVGGEDA---VLPGGPALFGERPADSGAGWEEILAKSYKEHQTSQAARLGRGKREKTQASRQVRPYAA-EEDEHDAANHGGGGSSNGSLRHGEEGRXXXXXXXXXXXXXXXXXXEYGSEQPDAEFEPPTSKXXXXXXXXXXXXXXXXXXXXXXXXXEALAGAPVKKTRHRQRDSPIEVLETTEGIKTIVRCVTRFGVPDGDWRPCMEAVVTNSRLHLDPAFARD-IGPAKPFLQSALKKALEPDYPHAAGKRRELLSRIAAMELVFRKLQECKGKPFDIQARDKLCGVYINQAKGGGLEE------WSRENDRSLLIGLLKHGNSRYQAMVQDDTLGLRPALELALASGGGA--SWQLAWGEDGPTGQPGFKGSPEWKFVKDRLLLLERALVDEHQYRQGKASLERELKTLLARYQKSLGPNDQRIEQLIASVKEAQEREVPELVTRLAAIEEFQAAGEKVTAMRRRQEDARKRLTEAFSAMSAYIQRYRCQESEFDLGAALMNPMADCIAEVQDKHAIVRNLHQENKDLDLEFDKTLGRYVASVEDFVAKH 1882
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A7S2SHU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHU1_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.550e-46 Identity = 109/198 (55.05%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNK--SMTQEQLNLVIKYGAEDLFREDA--------------DDAENNGQDAVEEAGASAGGGEPESTQT----------RAEKKWGDGSHRGRKVSQ-WTDEAVDQLLDRVAAAD 747
F+F LST+AGGQGINLATADTV+IYD+DWNPHNDLQALARAHRIGQ ++VMIYRFV+RATVEERIL++AKKKL+LEHVVV + S +Q +LN V+KYGAE+LF +D ++ + G D E G G P T RA KKWGDG+ + K S W DEAVD+L+DR A A+
Sbjct: 175 FIFLLSTRAGGQGINLATADTVVIYDADWNPHNDLQALARAHRIGQKHQVMIYRFVTRATVEERILQIAKKKLMLEHVVVHGAGRGASFSQNELNSVLKYGAEELFADDXXXXXXXXXXXXXXXEEEGDAGSDGSSEK-PKRGPGRPRKGATPPPSVDIGEVRA-KKWGDGNAKQTKRSIIWDDEAVDKLVDREAHAE 370
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A4D9DCH2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCH2_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.550e-44 Identity = 110/221 (49.77%), Postives = 136/221 (61.54%), Query Frame = 1
Query: 226 KDIFLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNK--SMTQEQLNLVIKYGAEDLFREDADDAENNGQDAVEEAGASAGGGEPESTQTRAEKKWGDG-SHRGRKVSQWTDEAVDQLLDRVAAADXXXXXXXXXXXXXXXXXXXXXTSTALG--SLLQTFKVASFAQVE 873
+D F+F LST+AGG GINL +ADTVIIYD DWNPHNDLQALARAHRIGQ KVM+YR ++R +VEER L++AKKKLLLEHVVV + + +MTQE+L+ V+KYG E+LF E+ + NG++ E A A KKWGDG + + K W +EAVD+LLDR D T G L Q+FKVA FA VE
Sbjct: 866 EDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANA---------------KKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEDGRGERLESGTEAMVGEESGEERKTGKGLSGLFQSFKVARFASVE 1071
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A7L0EC71_TROML (CHD5 protein (Fragment) n=15 Tax=Aves TaxID=8782 RepID=A0A7L0EC71_TROML) HSP 1 Score: 152 bits (383), Expect = 6.440e-39 Identity = 73/113 (64.60%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREDAD 561
F F LST+AGG GINLATADTVIIYDSDWNPHND+QA +RAHRIGQ KVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G + SMT+++L+ ++K+G E+LF++D +
Sbjct: 31 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE 143
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A6J1W692_9SAUR (chromodomain-helicase-DNA-binding protein 3-like n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1W692_9SAUR) HSP 1 Score: 154 bits (388), Expect = 1.310e-38 Identity = 76/122 (62.30%), Postives = 103/122 (84.43%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREDADDAENNGQDA 588
F F LST+AGG GINLATADTVII+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G + SM++++L+ ++K+G E+LF+ D ++ EN +D+
Sbjct: 46 FCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFK-DENEGENKEEDS 166
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A7K8ZL85_9PASS (CHD3 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K8ZL85_9PASS) HSP 1 Score: 150 bits (378), Expect = 2.090e-38 Identity = 71/111 (63.96%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFRED 555
F F LST+AGG GINLATADTV+I+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G SM++++L+ ++K+G E+LF+++
Sbjct: 33 FCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE 143
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A401Q947_SCYTO (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401Q947_SCYTO) HSP 1 Score: 149 bits (377), Expect = 7.670e-38 Identity = 73/122 (59.84%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREDADDAENNGQDA 588
F F LST+AGG GINLATADTV+I+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+R +VEERI +VAK+K++L H+VV+ G SM++++L+ ++K+G E+LF+ D + +N +D+
Sbjct: 6 FCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKGDIE-GDNRDEDS 126
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: UPI001CB7AFF9 (chromodomain-helicase-DNA-binding protein 4-like n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7AFF9) HSP 1 Score: 149 bits (377), Expect = 8.410e-38 Identity = 72/111 (64.86%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFRED 555
F F LST+AGG GINLATADTVIIYDSDWNPHND+QA +RAHRIGQ KVMIYRFV+RA+VEERI +VAKKK++L H+VV+ G + SM++++L+ ++K+G E+LF+++
Sbjct: 46 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKDE 156
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Match: A0A1B6FP23_9HEMI (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6FP23_9HEMI) HSP 1 Score: 154 bits (390), Expect = 1.020e-37 Identity = 77/127 (60.63%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 235 FLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFRED--ADDAENNGQDAVEE 597
F F LST+AGG GINLATADTVIIYDSDWNPHND+QA +RAHRIGQANKVMIYRFV+R +VEER+ +VAK+K++L H+VV+ G N + T+++L+ ++++G E+LF+ED +D+A + A+EE
Sbjct: 3 FAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGLGSKNTNFTKQELDDILRFGTEELFKEDEKSDEAIHYDDKAIEE 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.495.1 >prot_P-fluviatile_contig1.495.1 ID=prot_P-fluviatile_contig1.495.1|Name=mRNA_P-fluviatile_contig1.495.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=968bp SGENSGGGGHNGGDNEAEKHSGDVAGAEEDVAGDVGQEGGEGGAGGEDEKback to top mRNA from alignment at P-fluviatile_contig1:5477662..5498029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.495.1 ID=mRNA_P-fluviatile_contig1.495.1|Name=mRNA_P-fluviatile_contig1.495.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=20368bp|location=Sequence derived from alignment at P-fluviatile_contig1:5477662..5498029- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5477662..5498029- >mRNA_P-fluviatile_contig1.495.1 ID=mRNA_P-fluviatile_contig1.495.1|Name=mRNA_P-fluviatile_contig1.495.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5808bp|location=Sequence derived from alignment at P-fluviatile_contig1:5477662..5498029- (Porterinema fluviatile SAG_2381)back to top |