mRNA_P-fluviatile_contig1.492.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.492.1
Unique NamemRNA_P-fluviatile_contig1.492.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A482STX6_9ARCH (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482STX6_9ARCH)

HSP 1 Score: 350 bits (899), Expect = 1.470e-118
Identity = 171/202 (84.65%), Postives = 188/202 (93.07%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYIAAFSETLALA IVSK + PLK+AL++EPEDHIKAA AW+LGQIGRHTPDHARA+AEGDVLRHLLACM+H+DSS+DL+TKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDV ARRAFVQ+GGLQFLQELNETVGGKL E+I  IN CYP E+VE+YSPNYSK LL K+DE+QP V
Sbjct:  186 GNNKLPGIMAIGYIAAFSETLALATIVSKAIPPLKEALISEPEDHIKAACAWTLGQIGRHTPDHARAIAEGDVLRHLLACMVHEDSSEDLKTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVAARRAFVQSGGLQFLQELNETVGGKLSEFIIQINNCYPQEVVEFYSPNYSKTLLQKVDEYQPEV 387
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A3R6WK16_9STRA (Uncharacterized protein (Fragment) n=15 Tax=Oomycota TaxID=4762 RepID=A0A3R6WK16_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.400e-115
Identity = 165/202 (81.68%), Postives = 189/202 (93.56%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALA+I +KG++P+K+ALV+EPEDHIKAASAW+LGQIGRHTPDHARA+AE DVLRHLLACM H +SSDDL+TK+KRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGLQFLQEL+E  GGKL EYI  IN CYPPEIVEYYSPNYSK LLDK+DEFQP V
Sbjct:  270 GNNKLPGIMAIGYISAFSETLALAIITTKGIAPVKNALVSEPEDHIKAASAWTLGQIGRHTPDHARAIAEADVLRHLLACMTHPNSSDDLKTKAKRALKSILAKCTHLQALQPLLRDAPMKVQKYILKQFAQMLPHDLEARRSFVQNGGLQFLQELSEAAGGKLTEYILEINNCYPPEIVEYYSPNYSKTLLDKLDEFQPQV 471
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: T0QM12_SAPDV (Sperm-associated antigen 6 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QM12_SAPDV)

HSP 1 Score: 347 bits (890), Expect = 1.520e-115
Identity = 165/202 (81.68%), Postives = 190/202 (94.06%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALA+I +KG++P+K+ALV+EPEDHIKAASAW+LGQIGRHTPDHARA+AE DVLRHLLACMIH +SSDDL+TK+KRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGLQFLQEL+E  GGKL EYI  IN CYPPEIVEYYSPNYSK LLDK+DE+QP V
Sbjct:  307 GNNKLPGIMAIGYISAFSETLALAIITTKGIAPVKNALVSEPEDHIKAASAWTLGQIGRHTPDHARAIAEADVLRHLLACMIHPNSSDDLKTKAKRALKSILAKCTHLQALQPLLRDAPMKVQKYILKQFAQMLPHDLEARRSFVQNGGLQFLQELSEAAGGKLTEYIMEINNCYPPEIVEYYSPNYSKTLLDKLDEYQPQV 508
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: D7G791_ECTSI (Putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G791_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 6.990e-114
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:  100 LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA 609
            LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA
Sbjct:  340 LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA 509
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A7S2G6F1_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2G6F1_9STRA)

HSP 1 Score: 340 bits (873), Expect = 7.810e-113
Identity = 169/199 (84.92%), Postives = 187/199 (93.97%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQ 597
            GN KLPGIMA+GYIAAFSETLALA+IVSKGV+PLKDALV+EPEDHIKAASAWSLGQIGRH+PDHARALAE DVLRHLLACM+H DSS+DL+TKSKRALKAILAKCTHLQALQPLLR++PVKVQKYVL+QFA +LP DVEARRAFVQNGGLQFLQELNETVGGKLEE+I  IN CYP EIV++YSP+YSK LL+KI + Q
Sbjct:  320 GNTKLPGIMAVGYIAAFSETLALAIIVSKGVTPLKDALVSEPEDHIKAASAWSLGQIGRHSPDHARALAENDVLRHLLACMVHVDSSEDLKTKSKRALKAILAKCTHLQALQPLLREAPVKVQKYVLKQFASILPKDVEARRAFVQNGGLQFLQELNETVGGKLEEFITQINNCYPEEIVQFYSPHYSKELLEKITDAQ 518
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: H3G9L6_PHYRM (Uncharacterized protein n=44 Tax=Oomycota TaxID=4762 RepID=H3G9L6_PHYRM)

HSP 1 Score: 338 bits (866), Expect = 6.430e-112
Identity = 161/202 (79.70%), Postives = 187/202 (92.57%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALAVI SKG++P+K A+V+EPEDHIKAASAW+LGQIGRHTPDH+RA+AE DVLRHLLACMIH +SSDDLR KSKRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGL+ LQ+L+E  GGKL EYI  IN CYPPEIVEYYSP+YSK LLDK+D++QP V
Sbjct:  307 GNNKLPGIMAIGYISAFSETLALAVITSKGITPVKSAMVSEPEDHIKAASAWTLGQIGRHTPDHSRAVAEADVLRHLLACMIHPNSSDDLRIKSKRALKSILAKCTHLQALQPLLRDAPLKVQKYILKQFAQMLPHDLEARRSFVQNGGLELLQQLSEAAGGKLTEYILEINNCYPPEIVEYYSPHYSKTLLDKLDDYQPQV 508
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A835ZF63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF63_9STRA)

HSP 1 Score: 325 bits (834), Expect = 4.890e-107
Identity = 161/199 (80.90%), Postives = 178/199 (89.45%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQ 597
            G A+LPG+MALGY+AAFSETLALAVIV++ V PLK+ALVAE EDHIKAA  W+LGQ+GRHTPDHARALAEGDVLRH+LA M H DSS+DLR K+KRALKA+LAKCTHL ALQPLLRD+P K QKYVLRQFA LLPHDV+ARRAFVQ+GGLQ+LQEL E   GKLEEYI AIN CYPPE+VEYYSPNYSK LLDKIDEFQ
Sbjct:  307 GAARLPGVMALGYVAAFSETLALAVIVARAVQPLKEALVAEGEDHIKAACVWTLGQMGRHTPDHARALAEGDVLRHMLAAMSHPDSSEDLRLKAKRALKAVLAKCTHLAALQPLLRDAPPKAQKYVLRQFATLLPHDVDARRAFVQSGGLQYLQELAEGGAGKLEEYISAINACYPPEVVEYYSPNYSKTLLDKIDEFQ 505
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: F0YN79_AURAN (Uncharacterized protein n=5 Tax=Pelagomonadales TaxID=54409 RepID=F0YN79_AURAN)

HSP 1 Score: 301 bits (772), Expect = 9.380e-98
Identity = 150/167 (89.82%), Postives = 162/167 (97.01%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEY 501
            GNAKLPGIMA+GYIAAFSETLALA+IVSKGV+PLK+ALV EPEDHIKAASAWSLGQIGRHT DHARALAEGDVLRHLLACM+H DSS+DL+TKSKRALKAILAKCTHLQALQPLLR++PVKVQKYVL+QFA +LPHDVEARRAFVQNGGLQFLQELNETVGGKL E+
Sbjct:  307 GNAKLPGIMAVGYIAAFSETLALAIIVSKGVAPLKEALVTEPEDHIKAASAWSLGQIGRHTSDHARALAEGDVLRHLLACMVHQDSSEDLKTKSKRALKAILAKCTHLQALQPLLREAPVKVQKYVLKQFASILPHDVEARRAFVQNGGLQFLQELNETVGGKLTEF 473
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A7S3WLK5_9SPIT (Hypothetical protein n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WLK5_9SPIT)

HSP 1 Score: 278 bits (711), Expect = 1.410e-92
Identity = 134/200 (67.00%), Postives = 170/200 (85.00%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQP 600
            GN +LPGIM LGYIAAFSETLALAV+VSKG+ PLKDAL+ EPEDH+KAASAWSLGQIGRH+PDHARALAE DVLR LLA  +H DSS+DL+TK+KR+LK+++ KCT L AL+PLL ++P  + KYV++QFA++LP+D+ AR+ FVQ+GGLQ +QE++   G KL +YI+ IN  YPPEIV+YYSPNY++ L+ K+DEF P
Sbjct:   10 GNNRLPGIMTLGYIAAFSETLALAVVVSKGIPPLKDALINEPEDHLKAASAWSLGQIGRHSPDHARALAEADVLRRLLAVYLHQDSSEDLQTKAKRSLKSVIQKCTTLPALEPLL-EAPPNILKYVVQQFAKVLPNDLNARKNFVQSGGLQKIQEVSAEAGSKLNDYINEINALYPPEIVQYYSPNYAETLIKKMDEFNP 208
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BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Match: A0A812L165_9DINO (Spag6 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812L165_9DINO)

HSP 1 Score: 282 bits (721), Expect = 4.170e-90
Identity = 135/200 (67.50%), Postives = 171/200 (85.50%), Query Frame = 1 
Query:    1 GNAKLPGIMALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQP 600
            GN +LPGIM LGY+AAFSETLALAV+VSKGV PLKDAL++EPEDH+KAA+AWSLGQIGRH+PDHARALAE DVLR +LA  +H DSS+DL+ K+KRALK+I+ KCTHL AL+PL+ DSP  + KYV++QFA++LP+D++ARRAFVQ+G LQ +QE+    G KL+++I +IN  YPPEIV+YYSPNY+  LL K++EF P
Sbjct:  306 GNCRLPGIMTLGYVAAFSETLALAVVVSKGVPPLKDALISEPEDHVKAAAAWSLGQIGRHSPDHARALAEADVLRRMLAVYLHQDSSEDLQIKTKRALKSIIQKCTHLPALEPLI-DSPPNILKYVIQQFAKVLPNDIDARRAFVQSGSLQKVQEVGAETGSKLQDFIDSINMLYPPEIVQYYSPNYADKLLSKMEEFNP 504
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482STX6_9ARCH1.470e-11884.65Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A3R6WK16_9STRA1.400e-11581.68Uncharacterized protein (Fragment) n=15 Tax=Oomyco... [more]
T0QM12_SAPDV1.520e-11581.68Sperm-associated antigen 6 n=2 Tax=Saprolegniaceae... [more]
D7G791_ECTSI6.990e-114100.00Putative n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A7S2G6F1_9STRA7.810e-11384.92Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
H3G9L6_PHYRM6.430e-11279.70Uncharacterized protein n=44 Tax=Oomycota TaxID=47... [more]
A0A835ZF63_9STRA4.890e-10780.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YN79_AURAN9.380e-9889.82Uncharacterized protein n=5 Tax=Pelagomonadales Ta... [more]
A0A7S3WLK5_9SPIT1.410e-9267.00Hypothetical protein n=2 Tax=Strombidinopsis acumi... [more]
A0A812L165_9DINO4.170e-9067.50Spag6 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5463966..5467946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue2.1e-92
Seed eggNOG ortholog2880.D7G791
Preferred nameSPAG6
GOsGO:0000003,GO:0000226,GO:0001578,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0019953,GO:0021591,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0035082,GO:0036126,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060322,GO:0070925,GO:0071840,GO:0097014,GO:0097223,GO:0097228,GO:0097722,GO:0097729,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1990716
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-04_003710.1
Exons5
Model size612
Cds size588
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.492.1prot_P-fluviatile_contig1.492.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5463966..5467922 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815343.8969848-CDS-P-fluviatile_contig1:5463965..54641151622815343.8969848-CDS-P-fluviatile_contig1:5463965..5464115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5463966..5464115 -
1693561558.0315993-CDS-P-fluviatile_contig1:5463965..54641151693561558.0315993-CDS-P-fluviatile_contig1:5463965..5464115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5463966..5464115 -
1622815343.9072843-CDS-P-fluviatile_contig1:5465262..54653971622815343.9072843-CDS-P-fluviatile_contig1:5465262..5465397Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5465263..5465397 -
1693561558.0495634-CDS-P-fluviatile_contig1:5465262..54653971693561558.0495634-CDS-P-fluviatile_contig1:5465262..5465397Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5465263..5465397 -
1622815343.923565-CDS-P-fluviatile_contig1:5465856..54659491622815343.923565-CDS-P-fluviatile_contig1:5465856..5465949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5465857..5465949 -
1693561558.0650337-CDS-P-fluviatile_contig1:5465856..54659491693561558.0650337-CDS-P-fluviatile_contig1:5465856..5465949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5465857..5465949 -
1622815343.933802-CDS-P-fluviatile_contig1:5466922..54670481622815343.933802-CDS-P-fluviatile_contig1:5466922..5467048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5466923..5467048 -
1693561558.0731614-CDS-P-fluviatile_contig1:5466922..54670481693561558.0731614-CDS-P-fluviatile_contig1:5466922..5467048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5466923..5467048 -
1622815343.9432096-CDS-P-fluviatile_contig1:5467838..54679221622815343.9432096-CDS-P-fluviatile_contig1:5467838..5467922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5467839..5467922 -
1693561558.0811818-CDS-P-fluviatile_contig1:5467838..54679221693561558.0811818-CDS-P-fluviatile_contig1:5467838..5467922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5467839..5467922 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815343.951818-UTR-P-fluviatile_contig1:5467922..54679461622815343.951818-UTR-P-fluviatile_contig1:5467922..5467946Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5467923..5467946 -
1693561558.0890565-UTR-P-fluviatile_contig1:5467922..54679461693561558.0890565-UTR-P-fluviatile_contig1:5467922..5467946Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5467923..5467946 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.492.1

>prot_P-fluviatile_contig1.492.1 ID=prot_P-fluviatile_contig1.492.1|Name=mRNA_P-fluviatile_contig1.492.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp
MALGYIAAFSETLALAVIVSKGVSPLKDALVAEPEDHIKAASAWSLGQIG
RHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHL
QALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNE
TVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA*
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mRNA from alignment at P-fluviatile_contig1:5463966..5467946-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.492.1 ID=mRNA_P-fluviatile_contig1.492.1|Name=mRNA_P-fluviatile_contig1.492.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3981bp|location=Sequence derived from alignment at P-fluviatile_contig1:5463966..5467946- (Porterinema fluviatile SAG_2381)
GGCAACGCCAAGCTTCCTGGCATCATGGCGTTGGGCTACATCGCGGCGTT
CAGCGAGACCTTGGCCTTGGCGGTGATTGTGTCCAAAGGAGTGTCGCCGC
TCAAAGATGTGAGTGGTCTGGTCTTTCTGCTGCGCGTGGTTTCATGGCAT
GTTTTTGCCACAGCCTCCGCCCCCCGCTCGAGGATGCCTAACCTTTAATG
ATGAAACCCTTATTTGGTCAATGCACCCTCTCGTTTCGTACCCGGAAGGG
CTTCGTCGGCCAGCATTACATGGCGGGAGTATCGTGAACCTTTCAACAGC
TCTTCATTGTCGACGTGTCTTGCCCTTGCATCATTAGAAGGATGTGCGTT
TGTGTACCAAGTCTGCCCCCTCCGTTCTGCCCTTTTCTTGACTGCGTTAT
TCATTGTGATTTTGTCATTGCTCCTTTCTGCTTCCGTTCTCGTTTTCGAC
CGCCGTCTTCGTCCTCGTCTTTGTTATTGATAGTGATGTTGAGAGGAAAA
CCACGACAGGAAGAACGCCTCAGTTTTCAACGTCACACGGGTTAATCTTA
TGTGTCCCTTGACCGAGCATAGCACCATCCAATGCGTGGCGCCCGCGATT
TAATTCCTGGGGCAATCCTTTGTCACTCTCGCCGAAGAGCTGTGCCGCTT
CAGGGAAGATGCCACCAATTTCAAAACTCTTTTGTCGAGTCTTTAAGCTC
CTCGACCAGCTCAACCCCCCCCCCCCCATGCGCGTGCGGGAACAATGCTC
CGTCCTCTCGAGGACGCGTGGCCAATGGTCTAACAACTAATGCATGCAAA
ACATGAGTACGCCCCCAACAGCGGCAATGCTTTGTGATTCTTGCTGGTGA
CGAAAATAATTATGTTCGATGGCGCCCGTCACCCTTTCCCCGGAGCAGGC
GCTTGTCGCCGAGCCAGAGGATCACATCAAGGCGGCGTCGGCGTGGTCGC
TGGGCCAGATCGGGAGGCACACGCCGGACCACGCGCGCGCTCTGGCGGAG
GGCGACGTCTTGAGACACCTCCTGGTGAGGAGAGATAGCGGGACCCATCA
TCTCTTTTTTGATGAAGAAAGCAACAATACAACGGAGGAAGAGCGCTTTG
TTGAATGGACGCCTCGAAGCACCCGTTAATAGTGAGCAGAGACGAGAAAC
GTCCTGTATTTGTGTATCGGACAACGCAAGGCGGTGGACGATTGATGATT
GACCGGGCGTCTCGGGACACCTACGTCCTCGTGAGGAGACCGCCTCCTAT
TTGTCACCACAGTAGGAGAGCAAATGATCGAACGAGTGCCTGGAGGCACT
TCCCGTTAACCGAGAGGAGAGACGTCCTTCCCATGTAGCGAACGACACGG
AATGGCCGATGAATAGGTAGGAGAATGGGCGAACACGTCTATCCAAGTTC
TCTTTCGCACAGGATGTGTGGCTGCTCTTCGCCAGAGCTTACCTCGTTTC
TCGAAATCCTATTCTCAACCACATTTGCTGTCTTTCGTTCAGCGCTTCTC
TTTTCTACGGCTTAAACTGGCGTGAGCTTTGCTTCCCGCAAAGAAATACG
CCGCGAAAACTGCAGCCAGGTAGCCCTCGCAGAGGGGAGCATGTCGTTTT
ACAGCGTGACTGGTAGGGAAGAATCCCCACCCAGTCTAAGCGCACGCCGC
TATGAACATAGGACCCCAACCTCCACGTACACAAGACCGCGTTTGCATTG
CTGCTCGTATCACTTGAAGCATTAATACGTTATTTTTCAGCTGCTCAAGA
ATCTCGGGATAGGACCGATTGACGTGAAGAAAAAGAAGGAGTAAACCATT
CTTACGTGGGGCGCGTCGGCGTAGCTTCGACTTGACGCGACCTTAGGTTT
GTCTTGACACGACCTGTGGCTGAAACAACTTCGTCCATTTGCTGCTGCGG
ATCGAGGGGCACGCGAGACAAGTAGGCTACACCCACGGCAGGGTTCCCCA
CGCGCTTACCTCCATTGCTTTCCCTCGCCTGAAACCATCTGCCTCAGGCG
TGCATGATCCACGACGATAGCAGCGACGACTTGAGGACAAAGAGCAAGCG
CGCCCTAAAAGCCATCTTGGCCAAGTGCACCCACCTGCAGGTATGACTTC
GCAATCCCTTAACGTCGACGACAACATTCTCAACGCGTCAAGTAGAGAGC
ACGCCAAATGCCGTCGACGCCTGACATTGAAACAAGCCTCCACTCGTGAG
CCACGCTTTAGCCTGGCGTGGTTTCCGGCCGGCATGCTCGCTCTTGGTAT
GCGAAAGCAGAGCGGATGGAGTGGAGACGACGTTTCCTCTGCGTGTTTGA
AAAAATGCGGCCCGATACAGAGTTCTTTTCAAGCGTCGATCATCTTTTCG
ACGCTTGGGCAATACAATCGATGTCAACCTAACGACGGGGCCACCCCCTT
TGAAAACACTACTTTGACGTAATTTTCAATTTTCCCATTCAGCCGGGCAC
CGCAAGTGAACAAATCTCGAGACCCCCCAACCTGTTTGCTTGTTTCGACC
ACGGAACGCCGTGATTGGCGCAAACGAACGAATGAACGTGAGAGCGCAGG
CGCTGCAGCCGTTGTTGAGAGACAGCCCCGTGAAGGTGCAAAAGTACGTC
CTCCGGCAGTTCGCCCAGCTGCTGCCCCACGACGTTGAAGCGCGGAGGGC
GTTCGTGCAGAACGGGGGCCTGCAGTTCCTACAGGTACATGATGTACTAG
TGACGCGATCGGACCCCGTACCAAATCTTGTTTTTCTTTTTTGTTACAGA
GTTTGTCGACGTCCGTTTTCTCTTTGGTAAGAGGCTTCGAGGGGCCGCAT
GGTGCCCTGAGAAGCTGAAAAGCAATAACCTGCGCGCCGTCAAGGGTTGC
GGTTCACCCCCCCTTCCGCCATGTTTTTTTTTCAGCGAGTGAAGAGTTAA
GATCTGGAGCGCGTACCCTGTGCCCTTGGGAACGGCGAGAATGACTCCTA
TCGTTCTCGCTGAAGTCTGCTCGAGAAAATGACGTGGGCAGACGGCCGTT
TATTTCCGTGCCTTCCGATGGAATGAATGAAATCCGATGGTTTCGACTCA
CCAGCGACCTTGCAGCAACGACCAGCAAACAAGACCCTTGACTTCATTAA
AATGAAGCTCAGATTTTTGGAAGAAATAGAAACGGTCCAGGCTCGGCATT
TGCCGCGGCCAGATAACCCCCCCCCCCGCATCTGCTAGGAATGAAGGGGC
GTGTTTTTATTTTTATTATACCGTTGCCCAGAGTGAAACACAACCGTGCA
GGTAGGCCGTAGCTCTTAGACCCCCCTCTACTACACTACCGCAGAATGCA
CGGTTTCGAAACATAGTGCTGACACTTTCACACTCCCCCAAAAAAGCTAA
AAAAAGCGACACTATTAATAGAAGAGGGATGGATCACCGTGGAACTTGCC
TGACTCCCCCCTGAAGGTAGAAAAATAGACTACTGCTTTGCCAGTAAACG
TCGAGTAAACGTACGAAATTTGAGGGGGAGAAATTTATTTGGCGGGAAGA
TACTCGAGAGAAGAGGCTGATAACTTTGGCATTTTATCACGCCCAGTCTC
CACCAGAAGTTTCAATTCCTTGTAAGTGGGCCGATACTGTACTATCGACA
TTTTGTAGCTGGTGATGTTATATCGCGACAAAGTGTCCTTGCACGGGCTG
GTGGTCTGGTTGAGTAGGTCTATCTGGACCGTTTGTATTGGTATGGTCTC
GCAAGCGCAGTTGGTGATGTTACATCGCGACAAAATATCCTTGCACGGGC
TGGTGGTCTGGTTGAGTAAGTCTATCTGGTCCGCTTGTTCGACATGCTCC
CTGAAATCGGCGACAAATCACCTGCCCTCAGGAATTGAACGAGACAGTAG
GGGGCAAGCTGGAGGAGTACATCCACGCCATTAACGGGTGCTACCCCCCG
GAGATCGTCGAGTACTACAGCCCCAACTACTCCAAGGTCCTCCTCGACAA
GATTGACGAGTTCCAGCCGATGGTGGCATGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5463966..5467946-

>mRNA_P-fluviatile_contig1.492.1 ID=mRNA_P-fluviatile_contig1.492.1|Name=mRNA_P-fluviatile_contig1.492.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1176bp|location=Sequence derived from alignment at P-fluviatile_contig1:5463966..5467946- (Porterinema fluviatile SAG_2381)
ATGGCGTTGGGCTACATCGCGGCGTTCAGCGAGACCTTGGCCTTGGCGGT
GATTGTGTCCAAAGGAGTGTCGCCGCTCAAAGATATGGCGTTGGGCTACA
TCGCGGCGTTCAGCGAGACCTTGGCCTTGGCGGTGATTGTGTCCAAAGGA
GTGTCGCCGCTCAAAGATGCGCTTGTCGCCGAGCCAGAGGATCACATCAA
GGCGGCGTCGGCGTGGTCGCTGGGCCAGATCGGGAGGCACACGCCGGACC
ACGCGCGCGCTCTGGCGGAGGGCGACGTCTTGAGACACCTCCTGGCGCTT
GTCGCCGAGCCAGAGGATCACATCAAGGCGGCGTCGGCGTGGTCGCTGGG
CCAGATCGGGAGGCACACGCCGGACCACGCGCGCGCTCTGGCGGAGGGCG
ACGTCTTGAGACACCTCCTGGCGTGCATGATCCACGACGATAGCAGCGAC
GACTTGAGGACAAAGAGCAAGCGCGCCCTAAAAGCCATCTTGGCCAAGTG
CACCCACCTGCAGGCGTGCATGATCCACGACGATAGCAGCGACGACTTGA
GGACAAAGAGCAAGCGCGCCCTAAAAGCCATCTTGGCCAAGTGCACCCAC
CTGCAGGCGCTGCAGCCGTTGTTGAGAGACAGCCCCGTGAAGGTGCAAAA
GTACGTCCTCCGGCAGTTCGCCCAGCTGCTGCCCCACGACGTTGAAGCGC
GGAGGGCGTTCGTGCAGAACGGGGGCCTGCAGTTCCTACAGGCGCTGCAG
CCGTTGTTGAGAGACAGCCCCGTGAAGGTGCAAAAGTACGTCCTCCGGCA
GTTCGCCCAGCTGCTGCCCCACGACGTTGAAGCGCGGAGGGCGTTCGTGC
AGAACGGGGGCCTGCAGTTCCTACAGGAATTGAACGAGACAGTAGGGGGC
AAGCTGGAGGAGTACATCCACGCCATTAACGGGTGCTACCCCCCGGAGAT
CGTCGAGTACTACAGCCCCAACTACTCCAAGGTCCTCCTCGACAAGATTG
ACGAGTTCCAGCCGATGGTGGCATGAGAATTGAACGAGACAGTAGGGGGC
AAGCTGGAGGAGTACATCCACGCCATTAACGGGTGCTACCCCCCGGAGAT
CGTCGAGTACTACAGCCCCAACTACTCCAAGGTCCTCCTCGACAAGATTG
ACGAGTTCCAGCCGATGGTGGCATGA
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