mRNA_P-fluviatile_contig1.487.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A6H5KQE7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE7_9PHAE) HSP 1 Score: 145 bits (366), Expect = 7.380e-35 Identity = 73/122 (59.84%), Postives = 91/122 (74.59%), Query Frame = 1
Query: 517 SDSSCYKVYYYYSWREAFFRAHRAKPHELLHELSC-LPSSSSSAPAHQVQSPPPRVAVILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWDGEAIMGRRG 879
S S C + Y+ WREAFFRAHRA+P +LL ELS LPS+ + +P + ++LHG V L GFL HPGGALILQEHA TDA++AFERFFHSREARR+A+++VVWDGEA+MGR+G
Sbjct: 224 SRSCCDRAGYHCPWREAFFRAHRARPRDLLRELSSSLPSNVNIQQPPSQPAPEQQCIIVLHGNVYELAGFLSSHPGGALILQEHASTDATEAFERFFHSREARRMARRFVVWDGEAVMGRKG 345
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A835YMT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMT3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.520e-8 Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 1
Query: 553 SWREAFFRAHRAKPHELLHELSCLPSSSSSAPAHQVQSPPPRVAVILHGRVLVLDGFLRVHPGGALILQEHA--GTDASQAFERFFHSREARRIAKQYVVWDGEAIMGRRG 879
+WR +F+R R +PH L+ S A A +Q +++HG V + FL +HPGG IL E G DA++ FE + HS ARR+ + + VWD A G G
Sbjct: 78 TWRLSFYRELRERPHTLM----------SEARAAGLQY------LLIHGSVYDVGPFLDLHPGGVGILLEQVEKGGDATRQFELYMHSDAARRMMRDFCVWDAAAAAGAHG 172
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A2G5BA55_COERN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BA55_COERN) HSP 1 Score: 58.9 bits (141), Expect = 7.060e-7 Identity = 38/122 (31.15%), Postives = 57/122 (46.72%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWDGEAIMGRRGFPQAFVANKGGCCVGA*LSTGWQAATESVEKEPRNKRGIPNQSRSMGGHLPIEFNIV 1050
++++G V + GFL HPGG ++ EHAG DAS+AFE HS +A + K+Y++ G GA + Q T+ RNK+ S S G +P+ F +V
Sbjct: 24 IVINGHVYDVTGFLDEHPGGEEVILEHAGIDASEAFEDIGHSEDAHDMLKEYLI---------------------GKLEGAPPTAASQTKTQPEHSHLRNKQN----STSWGLLVPLAFAVV 120
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A1Y1W5B2_9FUNG (Cytochrome b5 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5B2_9FUNG) HSP 1 Score: 58.5 bits (140), Expect = 9.180e-7 Identity = 38/122 (31.15%), Postives = 57/122 (46.72%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWDGEAIMGRRGFPQAFVANKGGCCVGA*LSTGWQAATESVEKEPRNKRGIPNQSRSMGGHLPIEFNIV 1050
V++H +V + FL HPGG +L EHAG +A++AFE HS +AR + +QY++ D E G P + + E + E RG N S SMG +P+ +
Sbjct: 21 VVIHNKVYDITKFLDEHPGGEEVLLEHAGINATEAFEDIGHSEDARELLEQYLIGDLE------GAPPTSIPRR-----------------EEADGESTGVRGKQNSS-SMGFLVPLGLAVA 118
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: UPI0005F42FE9 (cytochrome b5-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F42FE9) HSP 1 Score: 57.0 bits (136), Expect = 3.100e-6 Identity = 21/61 (34.43%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 676 RVAVILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWDGE 858
R+ ++++ V + +++ HPGG+ +++EHAGTDA+ F+ F HS +A+++ K+Y++ + E
Sbjct: 23 RIWIVIYDNVYDVTDYMQQHPGGSELIEEHAGTDATNGFDDFGHSSDAKKMLKKYLIGELE 83
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A090LKZ0_STRRB (Cytochrome b5 n=1 Tax=Strongyloides ratti TaxID=34506 RepID=A0A090LKZ0_STRRB) HSP 1 Score: 56.2 bits (134), Expect = 6.460e-6 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWD 852
+I++ +VL + FL HPGG +L EHAG DA++AFE HS +AR++ +Y++ D
Sbjct: 23 IIINNQVLDVTKFLDEHPGGCEVLLEHAGNDATEAFEDVGHSTDARQMLPEYILGD 78
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A7S0ZUJ4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZUJ4_NOCSC) HSP 1 Score: 60.5 bits (145), Expect = 6.940e-6 Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVV--WDGEAIMG 870
+++HG VL L F+R+HPGG +L++++GTDA+ AF+ HS++A R A+++VV +G I G
Sbjct: 472 LVVHGAVLDLSNFVRLHPGGDAVLEQYSGTDATVAFDEVGHSKKALRWARKFVVARLEGSKIAG 535
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: UPI0005CEA543 (cytochrome b5 type B-like n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CEA543) HSP 1 Score: 55.8 bits (133), Expect = 7.850e-6 Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 673 PRVAVILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVV 846
PR +I+ G V + F+ HPGGA ++ E AGTDA+ AFE HS +A++I K+Y +
Sbjct: 18 PRCWIIVRGVVYDVTDFMAEHPGGAELIAERAGTDATSAFEDLGHSSDAKKILKKYEI 75
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A2G9UI08_TELCI (Putative cytochrome b5 n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9UI08_TELCI) HSP 1 Score: 55.8 bits (133), Expect = 1.200e-5 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVV 846
+ILH +V + FL HPGG ++ E AG DAS AF+ HS++AR +AK+Y++
Sbjct: 26 IILHDKVYDVSSFLAEHPGGFQVIAELAGKDASAAFDDIGHSKDARDMAKEYLI 79
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Match: A0A0K0FYK0_STRVS (Cytochrome b5 (inferred by orthology to a D. melanogaster protein) n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FYK0_STRVS) HSP 1 Score: 55.1 bits (131), Expect = 1.600e-5 Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 685 VILHGRVLVLDGFLRVHPGGALILQEHAGTDASQAFERFFHSREARRIAKQYVVWD 852
++++ +VL + FL HPGG +L EHAG DA++AFE HS +AR++ +Y++ D
Sbjct: 23 IVINNQVLDVTKFLDEHPGGCEVLLEHAGGDATEAFEDVGHSTDARQMLPEYILGD 78 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.487.1 >prot_P-fluviatile_contig1.487.1 ID=prot_P-fluviatile_contig1.487.1|Name=mRNA_P-fluviatile_contig1.487.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=309bp MTTSAPGISDEQGAGLGLLAAFAFVGGVVATVMTNRKFGHPTFHRGTRRNback to top mRNA from alignment at P-fluviatile_contig1:5394108..5396624+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.487.1 ID=mRNA_P-fluviatile_contig1.487.1|Name=mRNA_P-fluviatile_contig1.487.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2517bp|location=Sequence derived from alignment at P-fluviatile_contig1:5394108..5396624+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5394108..5396624+ >mRNA_P-fluviatile_contig1.487.1 ID=mRNA_P-fluviatile_contig1.487.1|Name=mRNA_P-fluviatile_contig1.487.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1854bp|location=Sequence derived from alignment at P-fluviatile_contig1:5394108..5396624+ (Porterinema fluviatile SAG_2381)back to top |