mRNA_P-fluviatile_contig1.48.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.48.1
Unique NamemRNA_P-fluviatile_contig1.48.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:793988..798234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size555
Cds size555
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815262.9655428-CDS-P-fluviatile_contig1:793987..7944421622815262.9655428-CDS-P-fluviatile_contig1:793987..794442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 793988..794442 -
1693561245.111438-CDS-P-fluviatile_contig1:793987..7944421693561245.111438-CDS-P-fluviatile_contig1:793987..794442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 793988..794442 -
1622815262.9807096-CDS-P-fluviatile_contig1:798134..7982341622815262.9807096-CDS-P-fluviatile_contig1:798134..798234Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 798135..798234 -
1693561246.1596892-CDS-P-fluviatile_contig1:798134..7982341693561246.1596892-CDS-P-fluviatile_contig1:798134..798234Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 798135..798234 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.48.1prot_P-fluviatile_contig1.48.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 793988..798234 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.48.1

>prot_P-fluviatile_contig1.48.1 ID=prot_P-fluviatile_contig1.48.1|Name=mRNA_P-fluviatile_contig1.48.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=185bp
MGRQTSQEAELEAAVEASLADSGHSAAEYPPKPAFGETAALSAAIEASLD
PHQVAAAAATAGYGGAHTNNHYNNDDDNNNNHTHYGSENKGRKHGGSGGR
SRGDGVVTGGGGSRGRANHSVPRRWMSGWTFDGSNESQDLAFLTDAPLIP
RAYDLPASAGGGCGSGGSGGSGGGSGGGSGGGSGG
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mRNA from alignment at P-fluviatile_contig1:793988..798234-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.48.1 ID=mRNA_P-fluviatile_contig1.48.1|Name=mRNA_P-fluviatile_contig1.48.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4247bp|location=Sequence derived from alignment at P-fluviatile_contig1:793988..798234- (Porterinema fluviatile SAG_2381)
ATGGGGCGCCAGACTTCCCAAGAAGCCGAACTTGAAGCGGCAGTGGAGGC
ATCTCTGGCCGACAGCGGCCATTCAGCCGCTGAATATCCGCCCAAACCAG
GTGAAGTAGTGTTCGGGGCTGCCATCGCAATCGCGTGCGTGCAACATGTG
TGCGTGCTGTTCGATGAGCGAGGTATTTCCCCACGCGGTAAATGGAACAT
CACAACCACATAGAGCGTGTGCGAGGCATGTATCCGTATCTCCCCTCTGT
CGGCCGCATACTCCGCACCGACACCTAACCCTAACCCCTAACCCTAACAC
TAAGCTGCTGTTGGCCTCCCATCGAGCGCTTCGTCGAGAAGTCCGCAACA
AGGCTCGCTTCACAACTGCTGTTTGCGGTCAGGAAGGACTACTGTCGAGA
TCCCCGCGTAGAAGCACGAGATCGAACACGTCATGAATATCAGATCGCAC
ACATGGCGAAGGAACATCGTTGGTTTATCCCAGAGGCTGATTTCCCTGGA
AGGCGCCCAACAGCGAAGCTCACTCCAAAAATGGCACCTATACTTCCCGT
GGATCACAAACACTTGCCGTAGCGCAACATTATCGTGCACTTTCTTCTGC
AAAGCAAGGCCATGCAACCACATCAGGAAGTCCTGTTGTCTCAAGGCGTG
ATCCGCACGGCTCCGTGCCGCCCCCACCCCAGCCCGTTGAGCAAGAGCAG
GAAAGCAGTCGGTATGCAAGGCACAAATTGCTGGCCACGGTCAAAATGAG
CCGAATTACGTCAAAGTTGTGCGCTGCAAGCAATTGTTCATACCAAGAGA
CCCTCCTCAAAGCTGAGACTACTGAAACTAAGAGTTTTGAGCTTCAAGCC
AAGGTCGATGACATGAAGGCCCTCAAAAACGATAAGAGTGGCGTCAAAGT
CTTGAGCTGTACGTAAGCTCTGGTCAGTGTCAGGAAGGTCCTCGAGGGGC
GGAGGCCGGTGACTTACAGAGTCGTGTACCTGGGACCGCAAGTCGAAGGC
ACGCATCCGAATCCCGCAGGCTTGTGTGCAGGTGCGGACTCACCTCCTGC
TAGACTCTCCCCCGAGGTTTGAATGACTGACGAATGCAGAGCTTGCCAGG
CGAGAGTTCGAGCCGACAAAGCAGCCAAGGCATACGGCCCTCTGATTGAG
TCGATATTGCTGTAGGCTGCAGGTTGATCTGCCTCAGGCTTACCAAAACG
TCTGGCACCATGTCTGGGTGTGCCTGAGATAGAGATTCGTATGCAGGTAC
ATCAGTGTGGACTCAATCGGGGTGTTGTATCCCTCGGCTGCATTTTCCGC
TCGAGTTCCCACCTCGCAAGAATTCGCCAGGCGCCACATCCTTGGGGAGT
CTAGTAGCAGGCATGTCCGCAGCCGTAAATGTGGTGTGGCCGTTAGTTTA
TAAAGGATTTGAAATGTCTTCAGTCTGATCGGGGAAACTACGTTCGCTGA
GTAGCCCAAATCTCACGAGATCAAAGCTTACCGGGAGAGTCCGCCGGTGG
ACAGAAAAGTTCCAGAATAAGACGGGGGCGTAATCCCAAGACGATGCGCT
CCCTCGGACACGGCTGCACATGTGTGAATCTCTTTCTCAGGCTCATACCC
GGACATGTCCCCCGAGACCCTGCTTGTCTCTTAACGGCGCCGGGTCACCC
CTGACGGCGTACGATTTCCAGTACTGAGGTCATTCTCGTGATTATGATGA
CACCGGCCCCGATGGTGAGAATCGTACGTTGAGGAGGGAGTAGCTGCCGC
TGCTAGGACACCAGCAGGGGCTCGAGCGGCGTGTCTGCGTGTGAGCCCGG
GATAAGGATCCAATCACACACACGTGTGCAGCCTCGCCCGAGGGAGGACC
ACTTCATGGGCACGAGATTTTTTTTTCGCCTCGGCGCTCACTCCAGGCCA
TCTCGGCGCCCCCGAGGCCGTGGGATTCTTGCGGGAGGCACACCCGCAGC
CGCAACTGGGGTGCGGAAGTTTCAAGAACCGGTTGGAACGGACCTCCTAC
GCAGGGAAATTAAGATTGGGTAGAAAGTAATCGGTTGGGGGTCAGATGAC
ATCTAACGCTAACCCTATCCTGGACCCTGATCCCAACTAATTATAACAAA
TCTTGTTTTTTTTGCACCCTGTGCGTAGGCTATTGGTTGAAACATTTGCA
CGCTTACCGCGGACACTACGTTATCTGCGTCGCCCAAGACCCACGAGCTG
CACGCTTACCAGGACAGTGCGCAGGCGAAAAAGCTTGAGAAGAAAAACGG
GGGGTTGTATTCCCCAGGAAGATGTGCTCCCTCGGGCGAGGCTGCCGTAC
ATGACTCGTACGTGCATATCAGGCTCAAACCCAGTCATTTCCCTCGGGCC
CCCGACTCGTGTCCCAGCGGTATCGGGTTCTCCCTGCTCGCGTACGAGTT
CCAATACAGTGGCCAGTCTCGTTCTAGGACGAGACCTCTAGTACAAGGCT
CACCCCTGGGCTGGTATTTCTAGGCGAAGAGGGAGTACCCGACCCGGCTA
GAACATCAGGAGGCGCTCGGGGGGGGTGTCTGGGTTCCAACCCAGGATGA
GGAGATTCGCGTATGTGCAGCCTTGTCGTCCTTTAGGGTGATGTACCCTG
CTCTTCTGATCGCCCAAGACCCTTACGGCACAGTACTGTTTGTTTCGCCG
GATCGTCGACCCGACCTCGAGAATAAAGCACAGACAGCGGCAAGCTTGAG
TATGTTGTACACATGAAGATGCTCTCTACCCGTTTTTTTGTTGACCCCAA
GGACAGCACTCGTCCTTTCTTTTTGGGACACCAACATGAAGGACACTCCC
TCTCTGTAAAGACTCGTTATCTTTTTGGAGCAGGTCAGGATGAGTCCGCT
TCCACTGAAACTTAAGGTCTCTTGCCCGCGTGAAGGACACTCGAAAAAAA
GCGCGGGGTGTCCTCAAAGCGGGGTTGACTGCACCACACAACCTCCATGT
TGTGTGGTGCATAAGTTTGGTGCGGCGTGCATGTGCATAGCTACTGAGTT
CCTTGGCCCACGTGAACACATTCCATACAGTATGTTGTTTTGATTGACTT
TTTGGTCTTTGTGTGTGCGCTCGTGTATTTTGACCATTGGCAACACACGT
CGAATGGGGCCAAAACACGGCACGACAAACGAGAGCAACATACGACAAAC
CAGAAGCCAGGAGCCACGTCGTGGTTTACGTCCCACAAGTTGGTTGGTTT
TTTCTTGTTTTTCTTTTTTTAAGGGCCGGCGGTTACCGAAGGCCGAGGCG
AGCCACAATGTGTTGACTCAACTCCGGCTGCAAATACCAGGTACTCATGC
CACAATCTGTTGACTTGACACTGGCTGCTGGCTGCGAGTGCTATCTACTC
AACCACAATCTGTTGACCCAGCTCTGGCTGCGAGAACCATTTACTCATCC
AATAGGTTCTGTGGCCGCTGGTGAAAGGTATGGACGTGGGTTTTTAATTT
TTTAGACAACGTCGAGACGAGATGTCATTTTTTTGTGGGACTCAAGTGGA
GCTTGAGAAGCGTTCGCTGTAGCACGCGACGACATAATCCAGAGTGCGTA
GACCTCGTTATTCTTTCTGTGATACAGGACTTTCTTCCCGTCAAGAACCC
ATTGCACCAATCATTCTTAGATCCCCTGTCTCTTCACGACCCTTTGCGCC
ATTCATTCTTACATCCCCCGTTTCTCGTCGTTTTTCATCCAAATTCTCAG
CTCTTGTTCCCGTCAAATCACTACTTGCACGCACAATTTCATGAACTCCA
TCTCCGTATCTGTTTCTCTGTCGGATGACTCGATTCGTGCAGCTTTCGGC
GAGACCGCCGCACTATCCGCCGCAATCGAGGCCTCCCTCGACCCGCACCA
GGTTGCCGCCGCCGCCGCGACCGCTGGTTACGGCGGCGCCCACACCAATA
ACCATTACAACAACGACGACGACAACAACAACAACCACACCCACTACGGC
AGCGAAAACAAGGGGCGTAAACACGGCGGCAGCGGGGGTAGAAGTAGAGG
CGACGGTGTTGTCACGGGCGGGGGCGGGAGCAGAGGCAGGGCGAATCACA
GCGTCCCGAGGCGCTGGATGTCGGGGTGGACGTTCGACGGCTCCAACGAG
TCCCAAGACTTAGCTTTTCTCACGGATGCTCCGCTGATCCCGCGTGCGTA
CGATCTGCCCGCTTCCGCCGGCGGAGGCTGCGGCAGCGGCGGAAGCGGCG
GCAGTGGCGGCGGCAGTGGCGGCGGCAGTGGCGGCGGCAGTGGCGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:793988..798234-

>mRNA_P-fluviatile_contig1.48.1 ID=mRNA_P-fluviatile_contig1.48.1|Name=mRNA_P-fluviatile_contig1.48.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1110bp|location=Sequence derived from alignment at P-fluviatile_contig1:793988..798234- (Porterinema fluviatile SAG_2381)
ATGGGGCGCCAGACTTCCCAAGAAGCCGAACTTGAAGCGGCAGTGGAGGC
ATCTCTGGCCGACAGCGGCCATTCAGCCGCTGAATATCCGCCCAAACCAG
ATGGGGCGCCAGACTTCCCAAGAAGCCGAACTTGAAGCGGCAGTGGAGGC
ATCTCTGGCCGACAGCGGCCATTCAGCCGCTGAATATCCGCCCAAACCAG
CTTTCGGCGAGACCGCCGCACTATCCGCCGCAATCGAGGCCTCCCTCGAC
CCGCACCAGGTTGCCGCCGCCGCCGCGACCGCTGGTTACGGCGGCGCCCA
CACCAATAACCATTACAACAACGACGACGACAACAACAACAACCACACCC
ACTACGGCAGCGAAAACAAGGGGCGTAAACACGGCGGCAGCGGGGGTAGA
AGTAGAGGCGACGGTGTTGTCACGGGCGGGGGCGGGAGCAGAGGCAGGGC
GAATCACAGCGTCCCGAGGCGCTGGATGTCGGGGTGGACGTTCGACGGCT
CCAACGAGTCCCAAGACTTAGCTTTTCTCACGGATGCTCCGCTGATCCCG
CGTGCGTACGATCTGCCCGCTTCCGCCGGCGGAGGCTGCGGCAGCGGCGG
AAGCGGCGGCAGTGGCGGCGGCAGTGGCGGCGGCAGTGGCGGCGGCAGTG
GCGGCCTTTCGGCGAGACCGCCGCACTATCCGCCGCAATCGAGGCCTCCC
TCGACCCGCACCAGGTTGCCGCCGCCGCCGCGACCGCTGGTTACGGCGGC
GCCCACACCAATAACCATTACAACAACGACGACGACAACAACAACAACCA
CACCCACTACGGCAGCGAAAACAAGGGGCGTAAACACGGCGGCAGCGGGG
GTAGAAGTAGAGGCGACGGTGTTGTCACGGGCGGGGGCGGGAGCAGAGGC
AGGGCGAATCACAGCGTCCCGAGGCGCTGGATGTCGGGGTGGACGTTCGA
CGGCTCCAACGAGTCCCAAGACTTAGCTTTTCTCACGGATGCTCCGCTGA
TCCCGCGTGCGTACGATCTGCCCGCTTCCGCCGGCGGAGGCTGCGGCAGC
GGCGGAAGCGGCGGCAGTGGCGGCGGCAGTGGCGGCGGCAGTGGCGGCGG
CAGTGGCGGC
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