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Homology
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: D8LNF2_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF2_ECTSI) HSP 1 Score: 606 bits (1563), Expect = 3.270e-201 Identity = 362/684 (52.92%), Postives = 442/684 (64.62%), Query Frame = 2
Query: 29 MHPDLDEEFIRVLESHRDIPATAAMQSIREPSFVVLRSPNDEAFCSMMMRNLTQTAV--KAKKSP---VQRQLASAMKRFLSAQPQGPAARRAVVTASLSLFRHSCAVLIPPKLASDAAHEVLRALAATDAAVGSSDGKNEERCQHE-----HQHGGASAVAGGAQAEAMGGKRLVLGTEGFPESQVAAFLLDATRLEPPPPPTPPIAVPSDIAVKIISVFGVGK----GSEDALEWGSPLVSASLRGSVRRVANRLQREGNWDQVLALVKHMETSSKGVEECQEVFGLQLGEMIASAMLQEQWESARKLVSAAAAGPVRQTLAKALIPAAVDAGAFEVATRLIEDHHLVSDFPIYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPTTHTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEMLIERGRQIAAMGVAGGGGDGGGDPHEWWTKFLRDNISEP 2038
M +LD+EF R+LESHRD+P A M I++PSF VL P D+ + M+ L+ K K P VQR+LASAMK FL+ + PAARRAVVTASLS+FRHSCAV +P KL+ AAH +LRAL + H+H S G A GG LVLGTEGFPESQVAAFLLD TR+EPPPP TPP+AVP+D+A+KIIS FGVGK G +LEWG P V+ SLRGSVRRVANRLQREG W V LV+HMET GVEEC+ V G++LGE+ + + E K++ A P R++ + SD + W+ + +++ + + D ++FK VE+M+ LGNLPAA +LMDH+ LH LP LDP+ +EA+ARERAAAHLQLPIS SRVLVV+G QTL+YA++ L +P AVG + +PGVRCVGLDVE PTT+ A LLQVATSTDVFLFDL+AL + EV R+FDAT+E LL DP IVKLGF+F DA +LR+ +P ARGFR+I ALLEVGE+S AVLG T SLSKTCEAWLGKPLDKTECAS+W RPLT DQV+YAALD+HCLVGIFEEML+ERG ++AA G G +PH WWT L NI P
Sbjct: 4 MATELDKEFGRLLESHRDVPDAAVMTPIKDPSFAVLTCPLDQVLAASMLGVLSTEPQNHKPKNLPFTVVQRKLASAMKLFLATERLAPAARRAVVTASLSVFRHSCAVTVPAKLSGMAAHALLRALVSVTTGTXXXXXXXXXXXXXXXXXXXHRHRSRSPSTG-----ATGGS-LVLGTEGFPESQVAAFLLDVTRVEPPPPXTPPVAVPADVALKIISAFGVGKAGRKGEGHSLEWGGPSVADSLRGSVRRVANRLQREGKWGLVSELVEHMETRG-GVEECEGVLGMKLGEVNRFVRVLMRQEKTMKVICNHVADP-----------------------RIVLKPNAGSD---------RSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKE------VEHMIGLGNLPAAAALMDHFGLHGALPALDPALIEASARERAAAHLQLPISSSRVLVVEGWQTLQYARQVLMEPAAVGGKGTVPGVRCVGLDVENSPTTNRATLLQVATSTDVFLFDLIALLGRAASLEVSRQFDATVEDLLTDPHIVKLGFSFAHDATALRKTFPSARGFRRIAALLEVGELSSAVLGRSTPSLSKTCEAWLGKPLDKTECASKWDVRPLTADQVRYAALDAHCLVGIFEEMLLERGGRLAATPGTRSDGSGNENPHRWWTGRLVANIDGP 642
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A7S4U829_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U829_GUITH) HSP 1 Score: 117 bits (293), Expect = 4.880e-23 Identity = 86/275 (31.27%), Postives = 135/275 (49.09%), Query Frame = 2
Query: 1184 IWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLP--ISMSRVLVVDGSQTLRYAQR---ALEDP----PAVGWRDGLPGVRCVGLDVE-----RCPTTHTAQLLQVATSTDVFLFDLMALSAHRPAS---EVFRRFDA------TMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEMLIERGR 1939
+ LV ++ A+ + ++L ++ + +E A+ +L LP I + V VD + + + + A+E+ PA W P + VGLDVE + A +LQVA ++ +FDL+ + + A+ + R D + LL +P I+KLGF D LR YP + F + +LL+V + SL +LG SL KT +A LGK LDK S W RPL+ +QV+YAALD+HCL+ +F+ + R R
Sbjct: 346 VHLVNSLISNRYYKEAMQMRRSYNLEEEVEEIPADVLERMAKLEDTKYLHLPPEIPLQEVCFVDSREKMAFCRSLILAMEEEASKAPASSWSSQPPTL--VGLDVEWKAVFKAGEVSRASILQVAFRRNILIFDLLWMCREKEATKEEDELSRGDGGLYGGGILHDLLVNPNIIKLGFDLKNDLEKLRNSYPLSSCFLFVSSLLDVSKWSLKLLGRSGNSLKKTVQACLGKDLDKRMQISDWEARPLSEEQVQYAALDAHCLLSVFDSIPTMRER 618
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: L1J090_GUITC (3'-5' exonuclease domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J090_GUITC) HSP 1 Score: 117 bits (293), Expect = 9.350e-23 Identity = 86/275 (31.27%), Postives = 135/275 (49.09%), Query Frame = 2
Query: 1184 IWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLP--ISMSRVLVVDGSQTLRYAQR---ALEDP----PAVGWRDGLPGVRCVGLDVE-----RCPTTHTAQLLQVATSTDVFLFDLMALSAHRPAS---EVFRRFDA------TMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEMLIERGR 1939
+ LV ++ A+ + ++L ++ + +E A+ +L LP I + V VD + + + + A+E+ PA W P + VGLDVE + A +LQVA ++ +FDL+ + + A+ + R D + LL +P I+KLGF D LR YP + F + +LL+V + SL +LG SL KT +A LGK LDK S W RPL+ +QV+YAALD+HCL+ +F+ + R R
Sbjct: 664 VHLVNSLISNRYYKEAMQMRRSYNLEEEVEEIPADVLERMAKLEDTKYLHLPPEIPLQEVCFVDSREKMAFCRSLILAMEEEASKAPASSWSSQPPTL--VGLDVEWKAVFKAGEVSRASILQVAFRRNILIFDLLWMCREKEATKEEDELSRGDGGLYGGGILHDLLVNPNIIKLGFDLKNDLEKLRNSYPLSSCFLFVSSLLDVSKWSLKLLGRSGNSLKKTVQACLGKDLDKRMQISDWEARPLSEEQVQYAALDAHCLLSVFDSIPTMRER 936
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A225WXL1_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXL1_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.030e-20 Identity = 104/374 (27.81%), Postives = 161/374 (43.05%), Query Frame = 2
Query: 890 EQWESARKLVSAAAAGPVRQTLAKALIPAAVDAGAFEVATRLIEDHHLVSDFPIYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARE------------RAAA---HLQLPISMSRVLVVDGSQTLRYAQRAL--EDPPAVGWRDGLPGVRCVGLDVERCPT------------THTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLG-SKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
+ W +A L++ G + LAK L+ A+ + A R + L ++P + LL L ++++ W+MA + + L +M+ G + A L D+ P + +E A+ +AAA +L + ++ D + LR A E + + VGLDVE PT T A +LQV++S+ VF+ DL+AL + +VF +E L P I+K+GF F D L + +P G I LE+ V+ +LG S SLS T LG PLDK S W RPLT+ Q+ YAALD++CLV I +++
Sbjct: 230 KDWAAA-DLLARTFGGAEDKELAKVLVDEAIAIQDVKRAYRFVHSFDLQEEYP-------DIDLLYCHDGLMKLIERQRWQMAFSFAGNDASLQK----LLFNHMMAAGEIQWASRLAQILDI----PDFETRVMEMVAQRDSQQTNGLSYSAKAAALNGYLPFELGDESIIFCDTDEALRGAMEHFFGESQHCMEMSTDFENAQIVGLDVEWKPTSSKIAAVTDSTTTAVASILQVSSSSRVFIIDLLALHDNAFLFDVF------LERLFSSPFILKVGFGFDTDLKVLHQTFPERSGLINISPFLELSAVASKLLGVSIGNSLSNTTNTILGSPLDKRMQMSNWDVRPLTVPQLTYAALDAYCLVKITDKL 581
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A8K1FMK9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMK9_PYTOL) HSP 1 Score: 102 bits (253), Expect = 3.500e-19 Identity = 75/203 (36.95%), Postives = 106/203 (52.22%), Query Frame = 2
Query: 1328 LQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPTT-----HTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
L+LP + V+VVD +++L A L P G +R VG+DVE P + LLQ+AT + VFLFDL+A+S A T + +L P IVKLGFA D LR +P A F + + + LA + + SL + LG+PLDK E S W RPLT DQ+ YAALD++CL+ + +++
Sbjct: 211 LELPSDL--VVVVDDAKSLALANEVLMPTPLKG------AIRRVGIDVEWRPESLGGSRSRCALLQLATDSHVFLFDLIAISMDSLAP--------TFQHVLSSPDIVKLGFALDGDFIRLRESFPLAECFDHVENVQD-----LACIAHRRRSLKCLVKDVLGQPLDKREQCSDWEARPLTPDQITYAALDAYCLLLVQDQL 392
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A329S795_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S795_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 4.550e-17 Identity = 89/317 (28.08%), Postives = 147/317 (46.37%), Query Frame = 2
Query: 1025 HHLVSDFPIYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAA---VSLMDHWDLHRDLPPL-----DPSRVEAAARERAAAH---LQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLP----GVRCVGLDVERCPTTH-------TAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGI 1909
H LV++F ++K+ D V +L + L +++ W++A + + + L +++MV G L + +M D+P + D S + +R LP + +++ + T+R A ++ + +GL G + VGLDVE P T A +LQ+A+S VF+ DL+AL + +F F + LL P+ +KLGF F D L +P F + L++ + L GS LS+ LGKP++K S W +RPL+ DQ+ YAALD+ CLV +
Sbjct: 272 HRLVANFNLHKQYPD-VDVLYSRDGLMRLIETQRWQLALTFVGHDTTLQKVL----LDHMVAAGELAHTAHLIKIMVTAGFEPDIPLMIQNYPDSSEIGQTWSQRGIEDGNFYSLPEEVQSIVLCNSEDTVRDAMEHFFG--SINYENGLDVKADGKQVVGLDVEWKPITSRSKAMTPVASILQIASSDRVFVVDLLALHDN---DLLFASF---LSRLLTSPQWLKLGFGFDSDLKVLHLTFPERGVFTTVEPFLDLNTLGLQSAGS----LSQCVHHVLGKPMNKRMQLSDWEHRPLSQDQMNYAALDALCLVHV 571
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A7S2CMZ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMZ2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.460e-17 Identity = 57/167 (34.13%), Postives = 90/167 (53.89%), Query Frame = 2
Query: 1451 RCVGLDVERCP-TTHTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFG-EDANSLRRVYPPARGFRKIVALLEVGEVSL--------AVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
RCVG D E P LLQVAT +VFLFD++ L + ++ A ++ L +VK+G+ FG D +L + +P A+ + L+++ + + G + LS CEA LG+ LDKT+ + WG RPLT +Q+ YAALD+ CL+ + +++
Sbjct: 40 RCVGCDAEWPPGRPDLVSLLQVATRNEVFLFDMLRLMGG--CQDTRQQTVAVLQRLFRSSSVVKVGYKFGAHDLVALDQSFPDAQLAHGVQNLVDIEALFVNDPEYFCGGKQGQRRLGLSSVCEAVLGRGLDKTQQCTDWGQRPLTPEQLTYAALDASCLLSLVDKL 204
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A396K2Z6_MEDTR (Putative DNA helicase n=4 Tax=Trifolieae TaxID=163742 RepID=A0A396K2Z6_MEDTR) HSP 1 Score: 97.1 bits (240), Expect = 5.720e-17 Identity = 89/313 (28.43%), Postives = 146/313 (46.65%), Query Frame = 2
Query: 1004 ATRLIEDHHLVSDFP-IYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPT------THTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
A ++I+ ++L DFP +YK K+ L+++ +K W +A+ ++ +L +LV +E G + L + + L R L D +E + + HL+ + + ++ VD + L A +ED + +GLD E P + ++Q+A+ F+ DL+ L HR EV R D+ + +L P I+KLG+ F D L Y F+K LL++ +V G L+K E LG L+KT S W RPLT +Q++YAALD+ LV IF ++
Sbjct: 251 AYQIIKKNNLKQDFPDVYKRC--------KESSLKSLAEKGCWDVAEARINND----RQLMEYLVYLAMEAGYMEKVDELCERYSLDRFL---DIKVLETSIPQGNYLHLE-ELMVEDIIWVDDVEGLLDATCQIED------------AKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKL--HR---EVPERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELECFKKYKRLLDIQKVFKDPRGG----LAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHIFRQL 526
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: A0A444XK89_ARAHY (3'-5' exonuclease domain-containing protein n=4 Tax=Arachis TaxID=3817 RepID=A0A444XK89_ARAHY) HSP 1 Score: 96.3 bits (238), Expect = 1.010e-16 Identity = 91/326 (27.91%), Postives = 144/326 (44.17%), Query Frame = 2
Query: 965 LIPAAVDAGAFEVATRLIEDHHLVSDFP-IYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPT------THTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
LI V+ + A +I+ ++L DFP +YK K+ L+ + +K W +A+ ++ +L +LV +E G L + L R L D E +E HL + + ++ VD + L A ++ G + VGLD E P + ++Q+A+ F+FDL+ L SEV D + +L PRI+KLG+ F D L + YP + F+ LL++ + G L++ E LG L+KT S W RPLT +Q++YAALD+ LV IF +
Sbjct: 232 LIEEFVEKNMLKDAYEIIKKNNLKQDFPDVYKRC--------KESSLKNLAEKGCWDVAEARINND----RQLMEYLVYLAMEAGYTEKVDELCQRYSLDRFL---DIKLPETTIQEGRYLHLD-ELLVEDIIWVDEVEGLLDATSHID------------GFKVVGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFIFDLIKLH-----SEVPDTLDDCLTHILMSPRILKLGYNFQCDTRQLAQSYPELKCFKNYELLLDIQNIFKEPRGG----LARLTEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDAVVLVHIFHHL 520
BLAST of mRNA_P-fluviatile_contig1.470.1 vs. uniprot
Match: K7N5C5_SOYBN (3'-5' exonuclease domain-containing protein n=3 Tax=Phaseoleae TaxID=163735 RepID=K7N5C5_SOYBN) HSP 1 Score: 94.7 bits (234), Expect = 3.330e-16 Identity = 94/335 (28.06%), Postives = 150/335 (44.78%), Query Frame = 2
Query: 938 PVRQTLAKALIPAAVDAGAFEVATRLIEDHHLVSDFP-IYKELLDKVWLLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPAAVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLPISMSRVLVVDGSQTLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPT------THTAQLLQVATSTDVFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLRRVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTECASRWGNRPLTIDQVKYAALDSHCLVGIFEEM 1921
P+ TL + I + A+E+ I+ ++L DFP +YK K+ L+ + +K W +A+ + +L +LV +E G + L D + L R L P E + + HL + + ++ VD + L A R ++ G + +GLD E P + ++Q+A+ VF+FDL+ L H+ ++ D + +L PRI+KLG+ F DA L Y R F+ LL++ V G L+ E LG L+KT S W RPLT +Q++YAALD+ LV IF +
Sbjct: 237 PMLSTLVEEFIERNMLKNAYEI----IKKNNLKQDFPDVYKRC--------KESSLKNLAEKGCWDVAEARTNND----RQLMEYLVYLALEAGYMEKVDELCDRYCLDRFLDIKVP---ETSNLQGRYLHLD-ELLVDSIIWVDEVEGLLDATRHIK------------GFKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKMVFIFDLIKL--HKEVPDIL---DDCLSCILLSPRILKLGYNFQCDAKQLAYSYEELRCFKNYEMLLDIQNVFKEPRGG----LAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDAVVLVHIFHHL 530
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 616.3 |
| Seed ortholog evalue | 1.7e-173 |
| Seed eggNOG ortholog | 2880.D8LNF2 |
| KEGG ko | ko:K15304,ko:K20282 |
| KEGG Pathway | ko05166,map05166 |
| GOs | GO:0000054,GO:0000056,GO:0000082,GO:0000226,GO:0000278,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006403,GO:0006405,GO:0006508,GO:0006511,GO:0006606,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009056,GO:0009057,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0017016,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0022402,GO:0022613,GO:0030163,GO:0031224,GO:0031267,GO:0031323,GO:0031326,GO:0031503,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032386,GO:0032388,GO:0032879,GO:0032880,GO:0033036,GO:0033043,GO:0033044,GO:0033157,GO:0033365,GO:0033554,GO:0033750,GO:0034504,GO:0034599,GO:0034613,GO:0042221,GO:0042254,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045184,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046907,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0060255,GO:0060341,GO:0060968,GO:0065007,GO:0070013,GO:0070201,GO:0070727,GO:0070887,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0090087,GO:0090316,GO:1901181,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1903047,GO:1903506,GO:1903827,GO:1903829,GO:1904951,GO:2000112,GO:2001023,GO:2001024,GO:2001038,GO:2001039,GO:2001141 |
| EggNOG free text desc. | 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing |
| EggNOG OGs | COG5171@1,KOG0864@2759,KOG2207@1,KOG2207@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ran binding domain |
| Ec32 ortholog | Ec-04_004080.1 |
| Exons | 11 |
| Model size | 3468 |
| Cds size | 2028 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815340.2054193-UTR-P-fluviatile_contig1:5207784..5207812 | 1622815340.2054193-UTR-P-fluviatile_contig1:5207784..5207812 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 5207785..5207812 + |
| 1693561553.1790805-UTR-P-fluviatile_contig1:5207784..5207812 | 1693561553.1790805-UTR-P-fluviatile_contig1:5207784..5207812 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 5207785..5207812 + |
| 1622815340.4012406-UTR-P-fluviatile_contig1:5216891..5218303 | 1622815340.4012406-UTR-P-fluviatile_contig1:5216891..5218303 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 5216892..5218303 + |
| 1693561553.288858-UTR-P-fluviatile_contig1:5216891..5218303 | 1693561553.288858-UTR-P-fluviatile_contig1:5216891..5218303 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 5216892..5218303 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815340.22526-CDS-P-fluviatile_contig1:5207812..5207974 | 1622815340.22526-CDS-P-fluviatile_contig1:5207812..5207974 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5207813..5207974 + |
| 1693561553.1885307-CDS-P-fluviatile_contig1:5207812..5207974 | 1693561553.1885307-CDS-P-fluviatile_contig1:5207812..5207974 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5207813..5207974 + |
| 1622815340.2522354-CDS-P-fluviatile_contig1:5208881..5209116 | 1622815340.2522354-CDS-P-fluviatile_contig1:5208881..5209116 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5208882..5209116 + |
| 1693561553.1959555-CDS-P-fluviatile_contig1:5208881..5209116 | 1693561553.1959555-CDS-P-fluviatile_contig1:5208881..5209116 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5208882..5209116 + |
| 1622815340.2782893-CDS-P-fluviatile_contig1:5209608..5209829 | 1622815340.2782893-CDS-P-fluviatile_contig1:5209608..5209829 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5209609..5209829 + |
| 1693561553.2036958-CDS-P-fluviatile_contig1:5209608..5209829 | 1693561553.2036958-CDS-P-fluviatile_contig1:5209608..5209829 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5209609..5209829 + |
| 1622815340.2952478-CDS-P-fluviatile_contig1:5210149..5210368 | 1622815340.2952478-CDS-P-fluviatile_contig1:5210149..5210368 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5210150..5210368 + |
| 1693561553.2110555-CDS-P-fluviatile_contig1:5210149..5210368 | 1693561553.2110555-CDS-P-fluviatile_contig1:5210149..5210368 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5210150..5210368 + |
| 1622815340.3130517-CDS-P-fluviatile_contig1:5210984..5211185 | 1622815340.3130517-CDS-P-fluviatile_contig1:5210984..5211185 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5210985..5211185 + |
| 1693561553.218715-CDS-P-fluviatile_contig1:5210984..5211185 | 1693561553.218715-CDS-P-fluviatile_contig1:5210984..5211185 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5210985..5211185 + |
| 1622815340.3274698-CDS-P-fluviatile_contig1:5211758..5211884 | 1622815340.3274698-CDS-P-fluviatile_contig1:5211758..5211884 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5211759..5211884 + |
| 1693561553.2259474-CDS-P-fluviatile_contig1:5211758..5211884 | 1693561553.2259474-CDS-P-fluviatile_contig1:5211758..5211884 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5211759..5211884 + |
| 1622815340.3412452-CDS-P-fluviatile_contig1:5212175..5212337 | 1622815340.3412452-CDS-P-fluviatile_contig1:5212175..5212337 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5212176..5212337 + |
| 1693561553.2333207-CDS-P-fluviatile_contig1:5212175..5212337 | 1693561553.2333207-CDS-P-fluviatile_contig1:5212175..5212337 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5212176..5212337 + |
| 1622815340.3529065-CDS-P-fluviatile_contig1:5213027..5213183 | 1622815340.3529065-CDS-P-fluviatile_contig1:5213027..5213183 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5213028..5213183 + |
| 1693561553.2438383-CDS-P-fluviatile_contig1:5213027..5213183 | 1693561553.2438383-CDS-P-fluviatile_contig1:5213027..5213183 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5213028..5213183 + |
| 1622815340.364553-CDS-P-fluviatile_contig1:5215117..5215336 | 1622815340.364553-CDS-P-fluviatile_contig1:5215117..5215336 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5215118..5215336 + |
| 1693561553.2549212-CDS-P-fluviatile_contig1:5215117..5215336 | 1693561553.2549212-CDS-P-fluviatile_contig1:5215117..5215336 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5215118..5215336 + |
| 1622815340.3763158-CDS-P-fluviatile_contig1:5216092..5216211 | 1622815340.3763158-CDS-P-fluviatile_contig1:5216092..5216211 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5216093..5216211 + |
| 1693561553.2718318-CDS-P-fluviatile_contig1:5216092..5216211 | 1693561553.2718318-CDS-P-fluviatile_contig1:5216092..5216211 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5216093..5216211 + |
| 1622815340.3878543-CDS-P-fluviatile_contig1:5216683..5216891 | 1622815340.3878543-CDS-P-fluviatile_contig1:5216683..5216891 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5216684..5216891 + |
| 1693561553.279629-CDS-P-fluviatile_contig1:5216683..5216891 | 1693561553.279629-CDS-P-fluviatile_contig1:5216683..5216891 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 5216684..5216891 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.470.1 >prot_P-fluviatile_contig1.470.1 ID=prot_P-fluviatile_contig1.470.1|Name=mRNA_P-fluviatile_contig1.470.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=676bp
MHPDLDEEFIRVLESHRDIPATAAMQSIREPSFVVLRSPNDEAFCSMMMR NLTQTAVKAKKSPVQRQLASAMKRFLSAQPQGPAARRAVVTASLSLFRHS CAVLIPPKLASDAAHEVLRALAATDAAVGSSDGKNEERCQHEHQHGGASA VAGGAQAEAMGGKRLVLGTEGFPESQVAAFLLDATRLEPPPPPTPPIAVP SDIAVKIISVFGVGKGSEDALEWGSPLVSASLRGSVRRVANRLQREGNWD QVLALVKHMETSSKGVEECQEVFGLQLGEMIASAMLQEQWESARKLVSAA AAGPVRQTLAKALIPAAVDAGAFEVATRLIEDHHLVSDFPIYKELLDKVW LLVKKRKLQAVVKKPGWKMAQQMLDRGSKFKHELCIWLVEYMVELGNLPA AVSLMDHWDLHRDLPPLDPSRVEAAARERAAAHLQLPISMSRVLVVDGSQ TLRYAQRALEDPPAVGWRDGLPGVRCVGLDVERCPTTHTAQLLQVATSTD VFLFDLMALSAHRPASEVFRRFDATMEALLWDPRIVKLGFAFGEDANSLR RVYPPARGFRKIVALLEVGEVSLAVLGSKTTSLSKTCEAWLGKPLDKTEC ASRWGNRPLTIDQVKYAALDSHCLVGIFEEMLIERGRQIAAMGVAGGGGD GGGDPHEWWTKFLRDNISEPYGKIR* back to topmRNA from alignment at P-fluviatile_contig1:5207785..5218303+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig1.470.1 ID=mRNA_P-fluviatile_contig1.470.1|Name=mRNA_P-fluviatile_contig1.470.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10519bp|location=Sequence derived from alignment at P-fluviatile_contig1:5207785..5218303+ (Porterinema fluviatile SAG_2381) GCTACGCCCGCAGTTAGCAAGCAATACCATGCATCCCGATCTCGATGAGG
AATTCATTAGGGTTCTTGAGTCACACCGAGATATACCAGCCACGGCTGCG
ATGCAATCCATCCGAGAGCCCTCCTTCGTGGTGTTGAGAAGCCCGAACGA
CGAAGCTTTTTGTAGTATGATGATGCGGAACCTCACACAGGTGAGCAGAT
CGACCATGGACGTTGCTCACCTCCTGCACACAAATGCACGTAAATGGAAA
ACATGGGGTGGTAGACCTTGTTTTGAACACTGATCGATCCTCTCGCTTGC
CTTTGAGATTTCTGTGGACAGTCCGAAAACGTGTCACAGGAGCAAGCATA
TCCCACGTGCCCTTGCATCCGGCCTCCCACCCTTCAACCCTTTCCCACGG
CAAAGAGAGCGGGCGAGGGTGCGACCTGCAAGCCATAGCGGCGTCTGGAC
CTTAATTAATCTACCGAGGGTCTACGGCGGCGGCCGCCCATGTATTGGAC
ATCACAGGTTGACACGAGCTGTTGATCTGGCGTCTGCCCTTCGGTGTTTC
AGACAGATGCCATGCGACCTTGTGTGCCGAGCAGCTTCAATCATTCGCTT
CTTGCCGAGCAGGAATGCAGCTTCATTTCACAGACTCGAGACCGTTGAGG
TTCAATTCCACTGTTCCCGAAAGCCCGTCGTATGGCGGCACTGTCCCCCC
GCAATTTCCCTTTCCTTCACCATGTCCGATCCTCATGGACTTGACACAGT
TGGAATTTTCGCGGGTGCTGTTATCAAACACGAAAACCGGCGGCACGCAC
ACAAGGCCACACATTTGTCCGCGTTTACATGGCCTCCATTCCCGCCAACA
CAAACGTCTGCATGGACCTTCAGCCATGAATAATCTCCGTTACCCTTTGA
GTTCTGACGTTGTCAAAATCTTCCGGTGTTCATTCGACTAGCACCTATTC
TGTCGAGCGAGAGCTCGGAATTTGGTGCTGATCTTGTCCTCTTGTCCCGT
GCTGCACCAGGTCGCAAACATGCCTTCTCTACCCCCACGCCTCCTCTTCC
CTCCGCCGCGCCGCCCGCGCTGCCCTCGCCCCCAAAACCCAAACCAGACT
GCTGTCAAAGCGAAGAAGTCTCCCGTGCAGCGACAGCTCGCCTCCGCGAT
GAAGAGATTCCTGTCCGCGCAGCCGCAGGGTCCCGCCGCTCGCCGTGCGG
TCGTTACCGCCTCGCTGAGCCTCTTCCGCCACTCGTGCGCCGTGCTGATC
CCCCCCAAGCTAGCAAGCGATGCCGCCCACGAGGTGCTCAGGGCCTTGGC
CGCCACCGACGCCGCCGTCGGCAGCTCTGACGGTGCGAGGTGTTGTTTCC
TGTCTGCCTGCCGTGTTGGTAACTTTCTTCGCTGCCCGGGCGCAGTGGTT
CTCAGTGTTCAACACACCCCGGACGGTTTCATCTTTTTGTGTGTGTGCGT
TTGAGACGTGCGTGCGTGCGCTGGACTTGTTTCTTTACTGGTGCATTTTT
ATTGGCGCGTCGCCATCGTCGTCGTCGTCGTCGTTGTCGCGGTCTTGACC
GTCTAGGGTGAGAGCAGGTACCCGAGGCGAGATAGGTGAGGCGCGGCGAG
CTAGGAAAGTTGTACGTGGTTCCCGGTCGTGCGTGCTACTGAAGTTGGGC
GTGCTTTTCCTGTTTTGGTAGTCGTGCTGTCTAGTATAAATTCGTAATGT
TTCTTGAGACCGTTGCCTGACCGTTCCTCCGCCGATTCGAATCCTCTCAT
AGAATCGGTGGCCAACACAACGTTTGCCTACCCCCCCCCCTCGTTTTCCT
GCGCTCGTCGCGTCGCGAAAACAGGaAAAAATGAGGAGCGATGCCAGCAT
GAGCACCAGCACGGTGGTGCGTCGGCGGTGGCAGGGGGGGCTCAGGCGGA
AGCGATGGGGGGGAAGAGGTTGGTCTTAGGCACAGAAGGTTTTCCGGAGT
CGCAGGTCGCGGCGTTTTTGTTGGACGCCACTCGGCTGGAGCCGCCGCCG
CCGCCGACGCCACCGATCGCCGTGCCCTCGGATATCGCTGTTAAGGTAAA
GCAGGAAGATAGGATGTAGTTCCAGACAAGCTCATAGGCTGACGGGGGCA
GGGGGGGGGTCAGAGAATGCCAAAAATGGTCAGTAACATCACATGGGAGG
ACGGGGGATGACAGGGGAAGGAACAGCCAGGGGTCGGTTGATATGCAAGC
AGCGCGGAACATTGGAGGCGAATTGGATGCCTAAATGGCAGTGACACAAA
CGACGAGGAAACACAAGAAAGTTTGTGGTCAACGACACTGGCATTGGGTA
GCAGCAACAACAGGAACACTACACACTACCTCCGTGTTGTTTTGCATTCG
ATTTTTCGAGAACAGATCATTTCCGTCTTCGGTGTGGGCAAAGGCAGCGA
AGATGCTCTGGAGTGGGGAAGCCCCTTGGTATCCGCCAGCCTTCGAGGCT
CCGTTCGACGGGTGGCCAATCGGCTGCAGCGGGAGGGGAATTGGGACCAG
GTTCTAGCGCTGGTGAAGCACATGGAGACGTCGTCAAAAGGGGTGGAGGA
GTGCCAGGAGGTCTTCGGGCTGCAACTCGGCGAGGTGCGATGTCATAGTT
GTTCCGCGTTTCCCATCCGATTTTTGTTCGTTTTTGCGAAAGGTCACGAC
CAACTTTGAGTTTTTAACCCATAACGTTCATTCTACGTGCTTGTCTCACT
AGAGGGAACGGCTTTCGGATAGGAGGAGACAGGTCAGTGCAAATTGTTTG
CCCATGTTTTCCAATTTGATTCTGGTACAGCGTTGGTAATGTTTGAACTA
TTTTTGAGCGCTACCTCCTGGTAATACACGTACGCCCCGCGGTGCGAAAA
AAAATGTGTTCCGTCATAAGGAAACGAAACCGGGCAGGTGGTCGTTGGCG
TTCGCCTGGAACTTTTCCCTGGACGGGTCCGCGTGAATATCGGTGCGAGT
GCAAGAAAGATAGGGCGCGCGCCCCTGCCTTTGCCGCCGCATTGGAAGTC
ATTTCATGGCATGCCACAATATGGTTTATGTTGGACGGTTGCCGTAAGGC
ATGCCATAGTGATGTTTGCATTGTACGGTCGCCGGAAAATTTCGGTTGCT
GGCCTTCCGCTACCAGCCGCTTGCCCCCGCCCTCCCCCGCGTCTGTGTTT
ACTCGTTCTCGTTGTTCGCGTCTGTTCCCCCCCTCACTCTTGGCACAAAG
ATGATTGCTTCAGCGATGCTGCAAGAGCAGTGGGAGTCGGCGAGAAAGCT
CGTGTCAGCGGCCGCGGCGGGGCCGGTGCGCCAGACCCTAGCGAAGGCCC
TCATACCGGCGGCGGTGGACGCGGGCGCGTTCGAGGTCGCGACGCGCCTG
ATAGAGGACCACCACCTGGTGTCAGATTTCCCGATTTACAAGGAGCTGCT
GGTGAGCGAGAAATGCTCGCGCTGAGTGCGCAAGCGCAATTTTTTCGACC
GGCACTGCTGCTGCTCTTGGTGTTGCAGCCTGCTGTTCCTACCGATGCTA
TGATGGTACATTGCAGTCGTAATGTTTACCCGTATTCTGCTTGTGGCTCT
CAGCATTTTCATTTGGTGTCACCGCCCCTCTTGAGTCTTCAAAGTACTTG
AAGGATATTTCACGACGTTCGTGAGTCCTTGCCCGCAGTTCTTGATAATA
CCTTCTCGCTGACCAACTTGCGTGTTTTCCTGTGGTCTATCACATTCGAG
GGGGCACCCAGATGAGATGAGCTTATCCGGCCCCCTCTGGCGCCGAAGGT
CACCCGAAAGTGCACCTGCGGTTTGAGCGCCGTGCTCTTGGCTCGCGCTC
CCTGGTCCTGCCCTGAGCGGAGCAAGGGCTTCGCGTCTCCTCGGGGATCC
CTGACCTTGTCACAAGCGTGCTTTGCCGATCGCCTTTTGTGCTCTCGTCC
GTTCCGTGTGGTGGTCTCCCGCCGTTCGCCCTCGTTTGCGTGTGGTTGGG
GACGAGGGGATTGGATACGCGCAGGACAAGGTCTGGCTGCTAGTCAAGAA
GCGAAAGCTGCAGGCGGTCGTCAAGAAGCCGGGGTGGAAAATGGCGCAGC
AGATGCTGGACCGAGGGTCTAAGTTTAAGCACGAGCTGTGTATCTGGCTG
GTGAGCAAAGCCTCTGCAGTTAGCGCTCTTGGGCTGCCGCCCGGGGGTCG
GGAGGAGAAGCAGAAGCCGCAGAAGTAGCAACAGCAGCAGCAGCAGCAGA
GGGAGCGCTTGGTATCGCAAGGAGTTGTATCGTCAAGGAAGACGAGTGGC
CGAAGCATTTCGAAGGGTCGCTTTTGCTGTTCCTTCGGGTCAAGAAATGA
TCGCCTCCAGCAGCTGCAACAGCAACGACCAAAGACGCAGCGAGTGAAAT
CAAGCCCGACACAATCTTCTCGTCCCATTTTCTCGGTACAGGTGGAGTAC
ATGGTCGAGCTCGGCAATCTTCCCGCGGCGGTGTCGCTGATGGACCACTG
GGACCTCCACCGGGATTTGCCGCCACTGGACCCCTCCCGCGTCGAAGCGG
CCGCGAGAGAGCGGGCCGCGGCGCACTTGCAGCTCCCGATCAGCATGTCG
AGGGTGTGTGGTAGTTCGTTCGCTGGCTTCGTCTCTGCCACCATTTCTGC
TCCTTGTTTTCCTTATCTTCGAAGTCGCTCCTCGCGTCCGTCGCGCCCTG
CGCTGGTTTGGTGCCGCCTGCCGTCGCCTGTCCTTTTCATTACCGCTGAA
CAGGGTGTGTATTGCTGGTGAGTTCCTTTTCGTGTTGTCCGCGGCAGTCA
TCCTTTCACCCAGTTGGTTGACTCTCCCCTTCGTTTGGAGGGGACGAAGA
CGGTGCGTCGAGTGCGCGCTAGGCCACGAGAAGCCGAACGAGCCACTGCC
GGGGTCTCCGCAGGGGCAAAGGCAGCCCATTGGGATGCAGGTAGACCCGC
CCCCATCCCCCCACCGCGTGCGCGTCAGCACTCCCGGCGACGAGTCTCAG
CCGTGCCGGTGCATGGCGCGTTGGAGAGTGGGTGAGGGTAGGTTGAAGGG
TCCACGTTCTTGAAGACTGCAGATTCTGCTGTCTCGGTAGGTTGGGTTTG
GTTGGGTTAGGTTGGTTTCTGTTTGGTCGGGGTTGGCGGGGTTGATTCCG
CAGGCACACGCACGTGCGCCAAAAACTATCCCAAAGAGAGCGCAAACGCT
CGCGAGTGGGAAGCAATGCGGTAAGCGTTCCACACAGACACACACACTAC
ACGCGCTCCCCGTTGCATCGCTCTCGGACTGAAACCATCGCAGGTGCTTG
TCGTGGACGGGTCGCAGACCCTCCGGTACGCCCAGCGCGCGCTGGAAGAC
CCGCCGGCCGTGGGCTGGAGGGACGGCCTCCCGGGGGTCAGATGCGTGGG
ATTGGATGTAGAGCGATGCCCGACCACACATACGGCACAGCTGCTTCAGG
TGTGGTGGACGCGGTTGGGGCTGCTTGTAGAGGTATGGTTTGGTTTGTTT
GCTTTTGCGACTGTAAAGCAACACACGCAGCCGTTTTGGACGTGGCGGCT
TCGTACGCGTCAGGGTAGGCGGTGCACGCGACTCAAATATGTGGTATCGT
TCAAACGTCTGGGCCGACATTCCATGTTGCATGCTTTTTCCTGTCTTCAA
CTCAACTCTTTGGCGCCACCGTCTGGCACATACGTTGACACCCGCCCAGC
TTTGTTCCCCCTGCCCCCCCCCCCTTTTTCGAGGGTGGATTGGTCGAGGT
AGGGTTGGCTCTTGTGGCATGGAGCTGTAAAACTGCTGTATAGGGCATGG
GGTTGTTCATGCGGTATATCCTGTGAGCTTGTGGACTCCGGTCCTAGAGA
TCACACCCTATAGGATGTCCGCTGAACGCTGGATAGTTGGAACGCCCTAG
AGCAATCATACTTATGAAATATCCACCTGTGGGGTATATAAGCAGATTAT
TCTCCAAGTGTATCACACACGAAGCGACGTGTTCGCTGTGTGTGGCGCGC
CAATATGATAAGTGCGCGCAAAGATCGAAGTcCCTTGCGGTACTTGAAGA
ATAGTCGAGCCTGCCGAATGTGAAACGTTTGGTTTACCGGATGCCCAATC
AACCCATGGCAGACCCGGTTTGGCTCAGCAAACACAAGGATGATGGCCAG
ATGCTGGCTTATCCTTGTGAAACGCGCCTGGCCGGCGAAAACCCGGCGTA
TCGCTCCGTCCCGGCATTGTAGGTGACGCGAGGTCTATGGTCTGACCGAC
TACGGCATGCGTTTTCATGAGTACACCCCCCTGCCCCATGCTCCGTCCTC
TCGAGGACGCGTGGTCAATGGTCTAACAACTAAGGCATGCAAAACATGAG
TACGCCCCCTGCCCCCCCCGCTGGCTCTCACCTCGGTGTTTGCCAGCGGG
ATTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCAATTCACT
TCGTGAACTCGGCAACCAGGTTACCGTCTTTTTTTTCCCTCTGGTTTTGT
TGGCGGTAACCATAAAGGTGGTCGAGTAGATCATGTTGTGCGGGGTGGAG
AACCCTCACTCCGCGCAAGGGGGATGATCGCACCACGTTGTGTTTAAATG
GTCAAGCACCCTCGAGGCAGTTACACAGTGCTAACAACTGTCTCTGGAAA
GTGAAAGTACCAGAAATAAATTAACCCATACGCACCTGTCATCCGTATGC
TAGGAAGTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCGCACC
CTTCATGCGACTCGCCGAATACCTCACGGCGCTTCGGGCTTGGTGGTGTG
AGAGCCTGGTCCGGTGAGAACCCGGACCGGAGTGCTCCGTCCCGGCTTTG
TAGGGATGCGAGTCAATGGTCTAACGACTACGGCATGCACGACTATGAGT
ACACCCCCTCCCTGCCCCGCCCGAACCCCCTTGATCGCCCCAAAGACCAT
CGACTGGAATCCATCGTACTTCTCGCGTGTGACTCTTTGACGGGGCAATT
ACTCCACGTATTGGATGCATCTCGGTTCGGTCCCTCCGTGATGAAGGCGC
CTTTCTGTTCAGCTTACAGCTCGCTTTGGCGGCTTGTGTCTTTCCGCCCG
CCCGGCGGGCACCATCTTTAGCTTGCTTTCTATGAACAAGTCGAGCCCCC
GGACATTCTGCTTTCTGTGCCCAAAGATGAATCGTGCACAGAGGTTCACC
CGTATTTCGCGTCGTGTCTTCGCCAACGGGGCGATCCTTGCTCCCTCCCC
CTCCCCAAAAAAGAGGAAAGATTGTCACCTGCTGCGCCTACAACCGAAAA
GCACACCACCAACCTCTTGCGACGAAGACGGCCGCTTTGAGATTCGTTGC
CTGATCTCTCTGAACACGACAAAATCGAATCAGGTAGCCACGAGCACAGA
CGTGTTCCTGTTCGACCTGATGGCTCTGTCGGCCCACCGGCCGGCGTCAG
AGGTGTTTCGGCGCTTCGACGCCACCATGGAGGCGCTCCTGTGGGACCCC
CGCATCGTCAAGCTCGGATTCGCGTTCGGCGAGGACGCCAACTCCCTCCG
GAGGGTCTACCCCCCGGCACGGGGGTTCCGAAAAATAGTGGCGTTGTTGG
AGGTGAGGGGAAGAGGGGGGGGTGCCAGGGCTGATTAGATGCTACGCGCT
CAGAAGTTTGGGGGTGTTGCGCTTGGATTTGGTTTGTGCTGCCGGGTGAT
AGTTGCCTGTTGGTGATCTTAGGAATGTAGGTGAAATGCCACCAGGATGA
GTAATTGGTTGGGGGGGCACTCAAACAACCTTGGGGTCCTGCAGCTTTTG
TTCAAAGTCGACGCGGGTCTTGATCGCGTTCTTCATCTGTTCCGTTCGCA
TCCGAGAGTGCATTGCCTTTTTGGGCGAGCGAGTCATGTAACACACCTGC
CGAGACATCGAGCTTTCCCGCGCCGTCCGTCGCCGATTATCGACGTCCAT
CAGCCCCGTGGGAACTTTCACGGAGACTCGGCCGCTTTCGATCGTTCAAG
CACGCGCACACGACTAAGCTTTCAGGAAATCATTCGCCGCTGCAGACCTC
TCGCCCGCATTTTAGCAAGCGCTACGCTCGCCCTCGGATCCAACATATCA
ATCTTCGGCTGCTTTGCTCGTCTGCCTGCCTGCACTATCTCTTCGCTATG
CGCGTTTACGTCGTCGTCAAACAAACCCGGGTGTTGCACTCTCGAAAACC
CCATCGATTGCTGGGAAATCACACTGGTGCTTCCATGTTTGGCCAAACAC
ACATTTTGGACGAGATTTTTTAAACTCTGGCCCTGGTTTCCTCCTCGCGC
TACGATATCCCTTTAATACGCTTGGGTTTTCCTCGCCGCGCTGTTGTCAA
CCTGATAGGTAGGAGAGGTCAGTTTGGCGGTGCTCGGTAGCAAAACCACG
TCGCTGTCGAAGACGTGCGAGGCATGGTTGGGCAAGCCGCTGGACAAGAC
GGAGTGCGCGTCGAGATGGGGGAACAGGTATCGAGACTGCTATTCACTCT
CGAGCGATCGGGATTAACCTGTTGCAAACGCCATTGGCGTCGTTGTTGAT
GTGTGGGTGCTGCCGTCACCGTTATTCATCAGCGTCCTCATGTTTCTAAG
CTTACGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCTCTGACT
CTCGTCTCTCTGTGTCTCTCTTTCTCTCTCTGCCTCTGCCTCTCTGTCTC
CCTCTCTCTCTGTCTCCCTCTCTCCCCCGCTCTCTATATATCTATATCTC
TCTCGCTTTCTCTCTTTCTCGCTCTGTCTCCCTCGCTCTCTCTGCCGCTT
CCGCTCGCTCTCGCTCTCGATTCTTGGCTGCGCCGGCCCTGCCCGCTAGG
CCCCTTACCATAGACCAAGTGAAGTACGCCGCCCTAGACAGCCACTGCCT
CGTCGGCATCTTCGAGGAGATGTTGATCGAGAGAGGGCGGCAGATTGCGG
CGATGGGTGTTGCTGGTGGTGGTGGCGACGGCGGCGGGGACCCGCATGAG
TGGTGGACAAAGTTTTTGAGAGACAATATCAGCGAGCCATACGGCAAGAT
TCGCTGATTCGATGAATGATGTGATATAATTTTAGGCTGGAGCTTTCAAA
CTTTTTTCCATTCTTTTTTTCCCCATTTTTGAGCGTTCCACCTGGGGAAA
TCGCTCGCACGGGAAAACACGGTGGTCGCTGCTCGCGAAGAGGCAATTGA
GAAACACATGCGTGCTTGTGCAGAAATGTAGCAGTCCTCTTGCCCTGCCT
AGCAGATCTAGGGATCAAGACGCGGGTAAGCCTGTTTCCCTCTTGCTTTG
CCGTAGATCAGTTTCGTGCAAGGGAAAAAAATCAGGGAGCCGACGCCCCG
GCCCTTCACACATTTTTGTGTGTTGCTTTATCTTGCGAGTGGTTCTTGCT
TACCAAACCGACGCTAGGGCTGACTATTGATCATACATCAAGTCCAACCC
AGTGAATACTCGCGTCTGCGTGCGCGTGCGCGTGCGTGTGCGCGTGCTCC
GGTTTTGTTGTTTTTTTGTGTGGGTCAACGCTCTCGATTTCAAGTCGGCC
TCGCTTCCATTTCCCTCGTTGAGCTCTTCCTGCCTTGGCTGCTCGGTGAC
ATTCGCTTGTCGTGCCGGGCGCCATCTATCCCCTCTTTCCGACTCGACAG
CAGCAGCAGCAGCGGCGGCAGCAGCCAGCAGCGATACTCGGAGCAGGCAG
GTTTACTTATTTTCCTTCTTCGATTGCGGGTATGGTAGCGGTAACCGCTC
GGGAAAAAAATGCGCAATTTGCCTTTACGTGTGGCGGTATCCTGTCTCCT
CCCACCCCCGCCCTTTCGTTTGCGCACTCGTTGAGTATGTAGAGCAGAGG
CGGCGGAGCGTAGCCACTCACGCGCCAACGCTTTTCACACAGAAATGGTT
GCCATCGGTTTATTGCCGTCCCTCAATCGAGGATGGCAGCGGAAAACCGC
CCGATCTTGTGTTTCAGATTGTACGGTCTATTGCGCAGTGTCGGGGCCCT
GCTTTTGCGATCACTCTGCGGTGTATGGAAGCAGCTTGTTCTCGCCGTGT
TTTGGCTTCACAAATCCCACCGTTTGCGGGTGTCCTCGGGTTCTCTTAAA
TGTTCATTTGACTTTGTGCATCCACCCTGAAGCGAATGTGTGCGTCCTTT
GGGACACCTTCATCACTTCTCGAGGCCTTGCCTTATTTTATGTGGCATGA
CTTAAGAGGGGAGAAGGGGGCTGACTCCTTCTGGGATTGAAGCAAACCGG
ATTTGTCTCAAGTTGGAGTCAAGCTTCATTGGATTTCACGTCTTCGTAAC
GGGCTTGGGCCTGCGAGTTTTGTTTTGAGTAACGTGAACGAAAGCGTCTC
ACCAGGGCGTGGACGCAAAAATTCCTCGAGTAGAGCCTGCCACCCTCGAG
AGCTGTAGGCCCGTGAGGTGATCAGCCTGTATCCGATGGCCCAACGCAAT
GCATCCGCACACGCGCCGA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig1:5207785..5218303+ >mRNA_P-fluviatile_contig1.470.1 ID=mRNA_P-fluviatile_contig1.470.1|Name=mRNA_P-fluviatile_contig1.470.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4056bp|location=Sequence derived from alignment at P-fluviatile_contig1:5207785..5218303+ (Porterinema fluviatile SAG_2381) ATGCATCCCGATCTCGATGAGGAATTCATTAGGGTTCTTGAGTCACACCG AGATATACCAGCCACGGCTGCGATGCAATCCATCCGAGAGCCCTCCTTCG TGGTGTTGAGAAGCCCGAACGACGAAGCTTTTTGTAGTATGATGATGCGG AACCTCACACAGATGCATCCCGATCTCGATGAGGAATTCATTAGGGTTCT TGAGTCACACCGAGATATACCAGCCACGGCTGCGATGCAATCCATCCGAG AGCCCTCCTTCGTGGTGTTGAGAAGCCCGAACGACGAAGCTTTTTGTAGT ATGATGATGCGGAACCTCACACAGACTGCTGTCAAAGCGAAGAAGTCTCC CGTGCAGCGACAGCTCGCCTCCGCGATGAAGAGATTCCTGTCCGCGCAGC CGCAGGGTCCCGCCGCTCGCCGTGCGGTCGTTACCGCCTCGCTGAGCCTC TTCCGCCACTCGTGCGCCGTGCTGATCCCCCCCAAGCTAGCAAGCGATGC CGCCCACGAGGTGCTCAGGGCCTTGGCCGCCACCGACGCCGCCGTCGGCA GCTCTGACGACTGCTGTCAAAGCGAAGAAGTCTCCCGTGCAGCGACAGCT CGCCTCCGCGATGAAGAGATTCCTGTCCGCGCAGCCGCAGGGTCCCGCCG CTCGCCGTGCGGTCGTTACCGCCTCGCTGAGCCTCTTCCGCCACTCGTGC GCCGTGCTGATCCCCCCCAAGCTAGCAAGCGATGCCGCCCACGAGGTGCT CAGGGCCTTGGCCGCCACCGACGCCGCCGTCGGCAGCTCTGACGGaAAAA ATGAGGAGCGATGCCAGCATGAGCACCAGCACGGTGGTGCGTCGGCGGTG GCAGGGGGGGCTCAGGCGGAAGCGATGGGGGGGAAGAGGTTGGTCTTAGG CACAGAAGGTTTTCCGGAGTCGCAGGTCGCGGCGTTTTTGTTGGACGCCA CTCGGCTGGAGCCGCCGCCGCCGCCGACGCCACCGATCGCCGTGCCCTCG GATATCGCTGTTAAGGaAAAAATGAGGAGCGATGCCAGCATGAGCACCAG CACGGTGGTGCGTCGGCGGTGGCAGGGGGGGCTCAGGCGGAAGCGATGGG GGGGAAGAGGTTGGTCTTAGGCACAGAAGGTTTTCCGGAGTCGCAGGTCG CGGCGTTTTTGTTGGACGCCACTCGGCTGGAGCCGCCGCCGCCGCCGACG CCACCGATCGCCGTGCCCTCGGATATCGCTGTTAAGATCATTTCCGTCTT CGGTGTGGGCAAAGGCAGCGAAGATGCTCTGGAGTGGGGAAGCCCCTTGG TATCCGCCAGCCTTCGAGGCTCCGTTCGACGGGTGGCCAATCGGCTGCAG CGGGAGGGGAATTGGGACCAGGTTCTAGCGCTGGTGAAGCACATGGAGAC GTCGTCAAAAGGGGTGGAGGAGTGCCAGGAGGTCTTCGGGCTGCAACTCG GCGAGATCATTTCCGTCTTCGGTGTGGGCAAAGGCAGCGAAGATGCTCTG GAGTGGGGAAGCCCCTTGGTATCCGCCAGCCTTCGAGGCTCCGTTCGACG GGTGGCCAATCGGCTGCAGCGGGAGGGGAATTGGGACCAGGTTCTAGCGC TGGTGAAGCACATGGAGACGTCGTCAAAAGGGGTGGAGGAGTGCCAGGAG GTCTTCGGGCTGCAACTCGGCGAGATGATTGCTTCAGCGATGCTGCAAGA GCAGTGGGAGTCGGCGAGAAAGCTCGTGTCAGCGGCCGCGGCGGGGCCGG TGCGCCAGACCCTAGCGAAGGCCCTCATACCGGCGGCGGTGGACGCGGGC GCGTTCGAGGTCGCGACGCGCCTGATAGAGGACCACCACCTGGTGTCAGA TTTCCCGATTTACAAGGAGCTGCTGATGATTGCTTCAGCGATGCTGCAAG AGCAGTGGGAGTCGGCGAGAAAGCTCGTGTCAGCGGCCGCGGCGGGGCCG GTGCGCCAGACCCTAGCGAAGGCCCTCATACCGGCGGCGGTGGACGCGGG CGCGTTCGAGGTCGCGACGCGCCTGATAGAGGACCACCACCTGGTGTCAG ATTTCCCGATTTACAAGGAGCTGCTGGACAAGGTCTGGCTGCTAGTCAAG AAGCGAAAGCTGCAGGCGGTCGTCAAGAAGCCGGGGTGGAAAATGGCGCA GCAGATGCTGGACCGAGGGTCTAAGTTTAAGCACGAGCTGTGTATCTGGC TGGACAAGGTCTGGCTGCTAGTCAAGAAGCGAAAGCTGCAGGCGGTCGTC AAGAAGCCGGGGTGGAAAATGGCGCAGCAGATGCTGGACCGAGGGTCTAA GTTTAAGCACGAGCTGTGTATCTGGCTGGTGGAGTACATGGTCGAGCTCG GCAATCTTCCCGCGGCGGTGTCGCTGATGGACCACTGGGACCTCCACCGG GATTTGCCGCCACTGGACCCCTCCCGCGTCGAAGCGGCCGCGAGAGAGCG GGCCGCGGCGCACTTGCAGCTCCCGATCAGCATGTCGAGGGTGGAGTACA TGGTCGAGCTCGGCAATCTTCCCGCGGCGGTGTCGCTGATGGACCACTGG GACCTCCACCGGGATTTGCCGCCACTGGACCCCTCCCGCGTCGAAGCGGC CGCGAGAGAGCGGGCCGCGGCGCACTTGCAGCTCCCGATCAGCATGTCGA GGGTGCTTGTCGTGGACGGGTCGCAGACCCTCCGGTACGCCCAGCGCGCG CTGGAAGACCCGCCGGCCGTGGGCTGGAGGGACGGCCTCCCGGGGGTCAG ATGCGTGGGATTGGATGTAGAGCGATGCCCGACCACACATACGGCACAGC TGCTTCAGGTGCTTGTCGTGGACGGGTCGCAGACCCTCCGGTACGCCCAG CGCGCGCTGGAAGACCCGCCGGCCGTGGGCTGGAGGGACGGCCTCCCGGG GGTCAGATGCGTGGGATTGGATGTAGAGCGATGCCCGACCACACATACGG CACAGCTGCTTCAGGTAGCCACGAGCACAGACGTGTTCCTGTTCGACCTG ATGGCTCTGTCGGCCCACCGGCCGGCGTCAGAGGTGTTTCGGCGCTTCGA CGCCACCATGGAGGCGCTCCTGTGGGACCCCCGCATCGTCAAGCTCGGAT TCGCGTTCGGCGAGGACGCCAACTCCCTCCGGAGGGTCTACCCCCCGGCA CGGGGGTTCCGAAAAATAGTGGCGTTGTTGGAGGTAGCCACGAGCACAGA CGTGTTCCTGTTCGACCTGATGGCTCTGTCGGCCCACCGGCCGGCGTCAG AGGTGTTTCGGCGCTTCGACGCCACCATGGAGGCGCTCCTGTGGGACCCC CGCATCGTCAAGCTCGGATTCGCGTTCGGCGAGGACGCCAACTCCCTCCG GAGGGTCTACCCCCCGGCACGGGGGTTCCGAAAAATAGTGGCGTTGTTGG AGGTAGGAGAGGTCAGTTTGGCGGTGCTCGGTAGCAAAACCACGTCGCTG TCGAAGACGTGCGAGGCATGGTTGGGCAAGCCGCTGGACAAGACGGAGTG CGCGTCGAGATGGGGGAACAGGTAGGAGAGGTCAGTTTGGCGGTGCTCGG TAGCAAAACCACGTCGCTGTCGAAGACGTGCGAGGCATGGTTGGGCAAGC CGCTGGACAAGACGGAGTGCGCGTCGAGATGGGGGAACAGGCCCCTTACC ATAGACCAAGTGAAGTACGCCGCCCTAGACAGCCACTGCCTCGTCGGCAT CTTCGAGGAGATGTTGATCGAGAGAGGGCGGCAGATTGCGGCGATGGGTG TTGCTGGTGGTGGTGGCGACGGCGGCGGGGACCCGCATGAGTGGTGGACA AAGTTTTTGAGAGACAATATCAGCGAGCCATACGGCAAGATTCGCTGAGC CCCTTACCATAGACCAAGTGAAGTACGCCGCCCTAGACAGCCACTGCCTC GTCGGCATCTTCGAGGAGATGTTGATCGAGAGAGGGCGGCAGATTGCGGC GATGGGTGTTGCTGGTGGTGGTGGCGACGGCGGCGGGGACCCGCATGAGT GGTGGACAAAGTTTTTGAGAGACAATATCAGCGAGCCATACGGCAAGATT CGCTGA back to top
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