mRNA_P-fluviatile_contig1.469.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.469.1
Unique NamemRNA_P-fluviatile_contig1.469.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.560e-117
Identity = 182/245 (74.29%), Postives = 199/245 (81.22%), Query Frame = 2 
Query:  626 AGDRRRRAVGRQLDGFIDGWR---------GALGSYDGLLKRHYLKMSFGQATALGVMGDTIAQRLERRLNPGQRYELKRTLHAGILNMIIDGVFTPRWYNLVDSVNSEMTLAIAFVKAITASVFYGPFANGLFLAGARTLRYGLKGRRFDWREWMRQLKICTIRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTDLTDESLPFGQRAVPLMICWAKAICGRLGGKGRRATGAPPV 1333
            AG +  +  GR +DGFIDGWR         GALGSYD LL+ HYLKMSFGQATALGV+GDT+AQRLER  NPGQRYE  RT+HAGILNMIIDG+FTP WYNLVD VN EMTL +AF KA+ +SVFY PFANGLFLAGAR LRYG K  RF W  W RQL +CTIRDFEMWPPLH+LNFWLVPKHWRPLAGHLAGVVLLAVIS T LTD  LP GQRAVPLM+ WA+A+ GRL GKGRRA+GAPP 
Sbjct:  188 AGQQWEKVTGR-VDGFIDGWRRDGDGNPFKGALGSYDALLEEHYLKMSFGQATALGVVGDTVAQRLERWRNPGQRYEFLRTVHAGILNMIIDGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYGFK-TRFGWAVWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWARAVGGRLSGKGRRASGAPPA 430
[Close]
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 8.900e-68
Identity = 107/136 (78.68%), Postives = 116/136 (85.29%), Query Frame = 2 
Query:  926 MTLAIAFVKAITASVFYGPFANGLFLAGARTLRYGLKGRRFDWREWMRQLKICTIRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTDLTDESLPFGQRAVPLMICWAKAICGRLGGKGRRATGAPPV 1333
            MTL +AFVKA+ +SVFY PFANGLFLAGAR LRYG K  RF W EW RQL +CTIRDFEMWPPLH+LNFWLVPKHWRPLAGHLAGVVLLAVIS T LTD  LP GQRAVPLM+ WA+A+ GRL GKGRRA+GAPP 
Sbjct:    1 MTLGLAFVKAVASSVFYSPFANGLFLAGARVLRYGFK-TRFGWAEWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWARAVGGRLSGKGRRASGAPPA 135
[Close]
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.030e-44
Identity = 83/186 (44.62%), Postives = 121/186 (65.05%), Query Frame = 2 
Query:  686 RGALGSYDGLLKRHYLKMSFGQATALGVMGDTIAQRLERRLNPGQRYELKRTLHAGILNMIIDGVFTPRWYNLVDSVNSEMTLAIAFVKAITASVFYGPFANGLFLAGARTLRYGLK-GRRFDWREWMRQLKICTIRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVIS-STDLTDESLPF 1237
            RG    YD LL+RHYL MSF QAT LGV+GD +AQ +E RL   + Y +KRT+H G L M+IDG+ TP +YN ++ ++ + T+ +  +K    +  +GP ANG+FLAG   L++GL   + F++  W  QL + TIRD ++WP L +LNF L+PKHWRPLA  LA + ++  +  +T  +  + PF
Sbjct:  138 RGLFKKYDNLLRRHYLSMSFAQATVLGVLGDLLAQGIELRLFR-RSYNVKRTMHVGFLTMLIDGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIVKMFNFASWKHQLLVATIRDLQIWPLLDMLNFKLLPKHWRPLASSLAALGVITFLGFATGFSQTTTPF 322
[Close]
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.010e-26
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 2 
Query:  827 ELKRTLHAGILNMIIDGVFTPRWYNLVDSVNSEMTLAIAFVKAITASVFYGPFANGLFLAGARTLRYG--LKGRRFDWREWMRQLKICTIRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTDLTDESLP 1234
            +++R +  G+L M IDGV TPRWY +++  ++   L +   K + +S+ YGPFANG+FLAG   LRYG  + GR FDW  W RQL I TIRD ++  P    N  LVP  ++PL    + +    V+S     +  LP
Sbjct:    6 DVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELP 143
[Close]
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Match: A0A7S2FW45_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FW45_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 3.310e-7
Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 2 
Query:  704 YDGLLKRHYLKMSFGQATALGVMGDTIAQRLERRLNPGQRYELKRTLHAGILNMIIDGVFTPRWYNLVD-SVNSEMTLAIAFVKAITASVFYGPFANGLFLAGARTLRYGLKGRRFDWREWMRQLKICTIRDFEM--WPPLHILNFWLVPKHWRPLAGHLAGVVLLAVIS 1204
            Y   L+ HY + +  QA  L  MGDT+AQ +E R   G  Y+ KRTL  G+L ++I G+ T RW  L++ SV    T  +   KA+  +  + P AN  +L     L  G        R+ +R  K   +   E+  + P ++++F LVP   RP       +     IS
Sbjct:  121 YIASLEHHYFQTTSLQAFILVAMGDTMAQTIEARAG-GIPYDAKRTLRMGMLGLLIGGLGTARWLQLLEHSVPGNGTPQLVAEKALLDACVWAPMANTAYLI-LTPLSEGKSPASV--RQQLRD-KFVPVMQTELATFLPYNLVSFSLVPPLIRPFTTGFISMCFAVYIS 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JL38_9PHAE1.560e-11774.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF3_ECTSI8.900e-6878.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UZM4_9STRA3.030e-4444.62Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YIQ1_9STRA4.010e-2640.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FW45_9EUKA3.310e-731.18Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5202639..5207686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score63.5
Seed ortholog evalue2.7e-07
Seed eggNOG ortholog9365.XP_007532632.1
Preferred nameMPV17
KEGG koko:K13348
KEGG Pathwayko04146,map04146
GOsGO:0000002,GO:0000302,GO:0001655,GO:0001822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005777,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0019222,GO:0019866,GO:0030198,GO:0031090,GO:0031323,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032835,GO:0032836,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042579,GO:0042592,GO:0043062,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071840,GO:0072001,GO:0072006,GO:0072593,GO:1901700,GO:1901701,GO:2000377
EggNOG free text desc.cellular response to reactive oxygen species
EggNOG OGs3A037@33154,3BNGQ@33208,3CZWS@33213,3JAXV@40674,489VZ@7711,4936N@7742,KOG1944@1,KOG1944@2759
COG Functional cat.S
Best tax levelMammalia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-04_004070.1
Exons5
Model size2793
Cds size1287
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815340.0914378-UTR-P-fluviatile_contig1:5202638..52040861622815340.0914378-UTR-P-fluviatile_contig1:5202638..5204086Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5202639..5204086 -
1693561553.1146822-UTR-P-fluviatile_contig1:5202638..52040861693561553.1146822-UTR-P-fluviatile_contig1:5202638..5204086Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5202639..5204086 -
1622815340.1643143-UTR-P-fluviatile_contig1:5207628..52076861622815340.1643143-UTR-P-fluviatile_contig1:5207628..5207686Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5207629..5207686 -
1693561553.1709442-UTR-P-fluviatile_contig1:5207628..52076861693561553.1709442-UTR-P-fluviatile_contig1:5207628..5207686Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5207629..5207686 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815340.101829-CDS-P-fluviatile_contig1:5204086..52043291622815340.101829-CDS-P-fluviatile_contig1:5204086..5204329Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5204087..5204329 -
1693561553.127564-CDS-P-fluviatile_contig1:5204086..52043291693561553.127564-CDS-P-fluviatile_contig1:5204086..5204329Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5204087..5204329 -
1622815340.1163814-CDS-P-fluviatile_contig1:5205007..52050731622815340.1163814-CDS-P-fluviatile_contig1:5205007..5205073Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5205008..5205073 -
1693561553.1356645-CDS-P-fluviatile_contig1:5205007..52050731693561553.1356645-CDS-P-fluviatile_contig1:5205007..5205073Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5205008..5205073 -
1622815340.130406-CDS-P-fluviatile_contig1:5205688..52058521622815340.130406-CDS-P-fluviatile_contig1:5205688..5205852Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5205689..5205852 -
1693561553.1431453-CDS-P-fluviatile_contig1:5205688..52058521693561553.1431453-CDS-P-fluviatile_contig1:5205688..5205852Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5205689..5205852 -
1622815340.1409051-CDS-P-fluviatile_contig1:5206314..52064351622815340.1409051-CDS-P-fluviatile_contig1:5206314..5206435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5206315..5206435 -
1693561553.1510592-CDS-P-fluviatile_contig1:5206314..52064351693561553.1510592-CDS-P-fluviatile_contig1:5206314..5206435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5206315..5206435 -
1622815340.1528807-CDS-P-fluviatile_contig1:5206935..52076281622815340.1528807-CDS-P-fluviatile_contig1:5206935..5207628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5206936..5207628 -
1693561553.1595004-CDS-P-fluviatile_contig1:5206935..52076281693561553.1595004-CDS-P-fluviatile_contig1:5206935..5207628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5206936..5207628 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.469.1prot_P-fluviatile_contig1.469.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5204087..5207628 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.469.1

>prot_P-fluviatile_contig1.469.1 ID=prot_P-fluviatile_contig1.469.1|Name=mRNA_P-fluviatile_contig1.469.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=429bp
MKILHILFLFALVGPLAVCLAEEEAPLRSTEGGLGAGREEDEVVLKLAEL
QQAASVLAAADQEAVITLEEKLEQVEEKLGQQESNGMSLQVGTEDDEDAE
ADAEEHKAEADGEDAGVEAVGHGAPGAEAAKAMAPEVDAVDIVTGNAIEE
AVDEAASKTSGLEAENEDEAPTAPPGGGALGTEADNAPGAGDRRRRAVGR
QLDGFIDGWRGALGSYDGLLKRHYLKMSFGQATALGVMGDTIAQRLERRL
NPGQRYELKRTLHAGILNMIIDGVFTPRWYNLVDSVNSEMTLAIAFVKAI
TASVFYGPFANGLFLAGARTLRYGLKGRRFDWREWMRQLKICTIRDFEMW
PPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTDLTDESLPFGQRAVPL
MICWAKAICGRLGGKGRRATGAPPVGRG*
back to top

mRNA from alignment at P-fluviatile_contig1:5202639..5207686-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.469.1 ID=mRNA_P-fluviatile_contig1.469.1|Name=mRNA_P-fluviatile_contig1.469.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5048bp|location=Sequence derived from alignment at P-fluviatile_contig1:5202639..5207686- (Porterinema fluviatile SAG_2381)
GCAACATGCAACATCCCAGCTGCTCGCGTGTGCGGGCGTACTGGGCGGTG
TCGTGGCCATGAAGATCCTTCACATCTTGTTCCTCTTCGCTCTCGTGGGT
CCGCTTGCGGTATGCCTGGCGGAGGAAGAGGCGCCGCTGCGATCGACGGA
AGGCGGACTTGGTGCCGGTCGGGAGGAGGATGAGGTCGTGTTGAAACTTG
CCGAGTTGCAGCAGGCGGCGAGTGTTCTTGCTGCAGCAGATCAGGAGGCC
GTAATCACCCTTGAAGAAAAGTTGGAGCAGGTCGAAGAGAAGCTTGGGCA
GCAGGAAAGCAACGGGATGTCGCTGCAAGTAGGCACCGAGGATGACGAGG
ATGCAGAGGCGGACGCGGAGGAACATAAAGCGGAGGCTGATGGTGAGGAT
GCAGGAGTAGAGGCAGTAGGACATGGAGCACCAGGAGCAGAGGCAGCAAA
GGCGATGGCACCAGAAGTCGACGCAGTAGACATCGTTACAGGAAACGCTA
TAGAGGAGGCGGTAGATGAAGCAGCATCTAAAACATCGGGCTTGGAGGCG
GAGAACGAGGACGAGGCGCCGACAGCCCCCCCCGGAGGCGGGGCACTCGG
GACGGAAGCAGATAACGCTCCGGGGGCAGGCGACAGGAGGCGGCGGGCTG
TGGGCCGCCAACTTGACGGCTTCATTGACGGGTGGCGGGGAGCTCTGGGA
AGCTACGACGGGCTCCTGAAGAGGCATTACCTTAAGATGTCTTTTGGCCA
GGTAGCTGGTATACATCTAAATCTCCAGTAGCCTAAACTCAACAGCACGC
ACGTACATGCGGCTCGAATGATGGTGTGGATATTCTCGCTGGTTCCGTTC
GCGCTTCGCAAAGGGTAGATATTGGCCTGGACGTGTTCCACGCCAGCAAG
TTTGCAGCTGAGTGCTACTGTTCGCATTATATGAGCGGTCCACAGGCACC
TCAACGGTTACGGCGCGAAAGGGCCGGGCTACCGTAGTAGACAGCATCAA
TGGCGAATCGAGCCGAGAAGCAGCAGTGGTGTTCTTGACTGCGTGTGTTC
TCGATATATCGCGATGCATTGCAAGTGAGGCCCTCGCAGGAATGTGTCAA
CACGCGCAAGTCGGCCCTAGTACATTTCGTTCCACTGCGGACCGTGCATG
TTGTGCAGTTCGCCGCAAGAAGTCGTCCTCCAACGGGCTTCGACAAAGCT
CAACATTCACTGCGGCGTGACAGGCTTCGGCAAAAACTGTCTTTTTCGCA
GGCAACGGCACTCGGGGTCATGGGCGACACAATCGCCCAGCGGCTGGAGA
GGAGGTTGAATCCCGGGCAACGGTATGAGTTGAAGCGCACGCTGCACGCT
GGCATTCTCAACATGATCATAGGTGCGTTATTTGTTGTCGAGCTTATGGT
TCGGTCTTGGCACACGATGGTGCGCAATTACCGTGTGATCAGGCGCTGCT
GGATTCGCCTCAAGTGTGTTGCGCTTCAGCTGCCTTCGTCCCGGATGCTC
TTCAATACTTTTCTCCAGGAAGTTAGGCTTTCGCGTGTCGTCGCCGGTCT
CGTCGAAGCACATTAACATGATAAACCTTGGCTCACACCAAACGAAGCGT
CGGGACTGGCGAACAGTGCAAGTACCAACCCTCGCAAGGATTGCGCAGAG
ACGTCGTCCGCCCCACCCCCGAAAGTGCTCCTGCGAAGGAGCCAATTGGT
GTGTTCCACATGCTGCTAAAGTTGCCCCCGAGCAGGAGTGCCGAAGTTTC
CGTATCCGTTCATTCCGATACGTAGTCAAAGGAACTCATCAGCTCTAGGC
TATTGGCGGCCCCTCGCGACTCCATTTTGCGCAGACGGTGTCTTCACACC
GCGATGGTACAACCTGGTGGACTCCGTGAATAGCGAGATGACGCTGGCGA
TCGCGTTCGTGAAAGCCATTACGGCGAGTGTGTTTTACGGCCCATTCGCC
AATGGGCTTTTCCTTGCCGGCGCCCGGACACTTCGCTACGGACTCAAGGT
AGCTGCACGAGATTCGTGACGGTGGAGAGACCATCTCTGAGACATTATCT
AGCGTGTACAGCAGTGGTCTCGACCATCTAGGGTACACGGGGAAGGACAC
GGAAGGCACTAAGATAAGCGCGCAGCTAATTTTCAGCATTCTTAGCCGGT
CGCACCTTGTGAAGGCTCGCTTATTTTGAAACAAGCAGTTGGGAAAAGTG
CGTGGAGAGGATCGACGTTTTTGCGCTTGAACCGTCAGGTTTTTCGCTTC
CATGTGTTCTGCGATCCTTCGTTCAGCTTTGCTATCGTTCAGAAGCATTG
CCTCATGCGTTGCCTGCAGGCCATAGCTCGGAAAGTGAACCTGTCATCGC
TATCTGACCGGCTCAAATTTTATATGAAGACCATGTTACTTGTTTTTGTG
GTAGGGTGGCCCCATTAGCATCTTGATTTTCCCACATGGCTCGAAAACAA
GAGGAAAGATTTATTCTGCATGGGTTTCTGCTTGAATTTTTTTCAGTGAA
CATTCTCAGTCAAGGTGACTCATGGGACCGATTTTTCGATGAAAGGCTTC
GATCTCCCTTCTCACGCTACTGTTGGCCGCGCTACACAAACATTCGACGT
TTGGACTCGACAGGGGCGGCGCTTCGATTGGAGGGAGTGGATGCGGCAGC
TGAAGATTTGCACGATTCGAGATTTCGAGGTGAGCCGCAACACGTCCAGC
ATTTTACTGTATGCACGTACCACTCAAGCTCTTCATCTTCACGCCAGTCG
CGCGCATTCCTTTTCTTTCACCGGCGGCGCGAGGAAAGCCTCAAAGCCAG
CGGCATTATCTTTCCTCAAAGTTTACCTTCAAGTACACCGCTGAATTGTG
TTAGCTCACCAGCTGGCTGCGCCCCTGGTTGGTTTTCCCCTCGTGGTAAC
GCTTGAAACACGAAGCAGTGCTTCTTTCACAGTGATTTGCGGGTGCGTGA
GGGAAAGAAAAGGCCCTCGTGAAGTGTGCCGTGCACGGGAGGAATGATAT
TGAACGGGAAGTAGGGCAGGAAGTAGGCCGAACATAAATACGCTGGCTTC
TCCGTCAAACGCGTGAAGCGAGATACGAGACGCTAGGTAGGAGGAGCGGA
ATACGGAAACGTTGGCATTTCCGTCTCTGTCACCTTTGCTCCCATTGCTT
TTGGTGCTTTGCGGTTGCTGGCCTGGTCGACGTCAATGACGATGCTGCCG
TTGTCTCTGTTGCAACTCTCCTAAACATGGATGCGCATACACTCAAACGT
GCATGGTTGCACACTGCGCAAACGTGAACGCGCGCTCGAACACGCACGTA
CGCACACTCGCGCGTATGCGGGCGAAATCGCGCACATGGTTTCGATTGAT
TGGGCAGATGTGGCCGCCGTTGCACATCCTGAACTTCTGGTTGGTGCCGA
AGCATTGGCGTCCCCTGGCCGGGCACCTTGCAGGAGTGGTTCTCCTGGCG
GTGATATCTTCGACCGATCTCACGGACGAAAGCTTGCCCTTCGGGCAGCG
CGCCGTACCTCTCATGATTTGCTGGGCGAAAGCGATCTGCGGACGGCTCG
GTGGGAAAGGGCGGCGAGCCACCGGCGCCCCGCCAGTCGGAAGGGGCTAG
GCTTGAATTTCGTAGAGAGGCGGAATATGTGGGGTGGGCGTTGGCGATGG
GTTTTGGGTCCCCGGGCAGCACAGAGATCCCCGTATTGTGAGTGCCCGCA
AGGGGTCAGGCTTGGTTCGGTGCAAAGAGGCTGCCATATCCAACGCACTT
GCGAAGTCGACCGCTTTATGTCAACGGGTAGCATCTGACTCGTGAAATGT
GTCAACGGAGAGGGGGCATGAGCAGCCAGGAGGGGCAGCGTGTAAGCCCC
TCCGACACACCAGCATACGTGCGCCCCAGAAAAGGGGGAAATGTTCAGTG
GTGTTGCCGAAGGGCAGTGGGTAGAAACACGCCGACACACCCGAAATTGA
TGTCTGTTTGCTTCTGTAGCAGATCCGCTCTCTTGAGTTTGAAGTGTGGA
ACGCTGAACATGAGGCGCCGAGGTAGGGTATTCTGCAAAGTTGCAGAGCA
GGTGTCGTCAAGAAGGCGACTGAGGCTTTGCAGCATGGCCACGGAGGAGA
GCTTGAACGAGTTGGATGGCAATGAAGTTGCTTGTGGAGAGCGCAGCAGA
GTGTTTGCTATGCATCACATCTGACGAGGCGATGTACCTTTGCGGCCAGG
GATATTAGATTGTTGGGAGATGATGGACTACACTGGGAATACAGTGTTTT
TTTAATTTTGCTGTTGATTAGGGCTTTGCTGTTCTCCCTCGATTACAAGG
TAAAATTGATCGCTGTATTCCAGAAAGTTTTTTGTAGTCGCGCACGAATT
GCGCCGTTGCAAGGTATTTGTAGGCTGCCTCTCCAGCCAAGTGTTCTGAC
CCAACCATGTTCTCGCTCCTCGCAGGAGCAGAGCTCAAAGAGGGTGAAAT
GGGCCGGTTGCTGATCAGGCTGTTGCAGATCTTGCACAAGCGCCCCCGCC
GCGCAGTACGCCAGTTACGTGTGAAACCATTCACGATGTCGGAGGGGGTA
TTTGGCAGTAGATCGTGCACCTGCTTGTGTGTAGCTTTGTCTCTTATCCC
TGTGTTTGCCCGTGTGATGCTCCGAGTCAGTATGGGGAGGAAAGAAGAAA
TCCCGTTTGCAATGCTGTCCAATAGACTAGATATTTCGGGTTCCATATTC
CTTAAGGGGGGGTGGTCAGCGGAGCACAGACTGTTTGTAGCACTTTTCCC
AGAATATTGTCACGTTTCCAGGATCAAGACGTTGGGAAAAACTTTGACGA
CGATCCGTATCGTGTGATGGCATCGCGGCCCAAGCGCGCATCTTAATGAG
TTTGACATCGCGAAGTGACAGCAGGGTGTTCACAGCTCGCAGCGCTTGCT
GCCGAAATTTGGCTGCGGCAAAAAAGTATTTGGTTGTGGATAAAGCATGC
GCAATGCCTGCGGCACTCGTGTGACTGGAAGGGAGAATGTTGACCGGTCG
TCTGCAGATGAAACATCTTGTCTTTCTGCACTCGTTCTTGGTTTCGAT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:5202639..5207686-

>mRNA_P-fluviatile_contig1.469.1 ID=mRNA_P-fluviatile_contig1.469.1|Name=mRNA_P-fluviatile_contig1.469.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2574bp|location=Sequence derived from alignment at P-fluviatile_contig1:5202639..5207686- (Porterinema fluviatile SAG_2381)
ATGAAGATCCTTCACATCTTGTTCCTCTTCGCTCTCGTGGGTCCGCTTGC
GGTATGCCTGGCGGAGGAAGAGGCGCCGCTGCGATCGACGGAAGGCGGAC
TTGGTGCCGGTCGGGAGGAGGATGAGGTCGTGTTGAAACTTGCCGAGTTG
CAGCAGGCGGCGAGTGTTCTTGCTGCAGCAGATCAGGAGGCCGTAATCAC
CCTTGAAGAAAAGTTGGAGCAGGTCGAAGAGAAGCTTGGGCAGCAGGAAA
GCAACGGGATGTCGCTGCAAGTAGGCACCGAGGATGACGAGGATGCAGAG
GCGGACGCGGAGGAACATAAAGCGGAGGCTGATGGTGAGGATGCAGGAGT
AGAGGCAGTAGGACATGGAGCACCAGGAGCAGAGGCAGCAAAGGCGATGG
CACCAGAAGTCGACGCAGTAGACATCGTTACAGGAAACGCTATAGAGGAG
GCGGTAGATGAAGCAGCATCTAAAACATCGGGCTTGGAGGCGGAGAACGA
GGACGAGGCGCCGACAGCCCCCCCCGGAGGCGGGGCACTCGGGACGGAAG
CAGATAACGCTCCGGGGGCAGGCGACAGGAGGCGGCGGGCTGTGGGCCGC
CAACTTGACGGCTTCATTGACGGGTGGCGGGGAGCTCTGGGAAGCTACGA
CGGGCTCCTGAAGAGGCATTACCTTAAGATGTCTTTTGGCCAGATGAAGA
TCCTTCACATCTTGTTCCTCTTCGCTCTCGTGGGTCCGCTTGCGGTATGC
CTGGCGGAGGAAGAGGCGCCGCTGCGATCGACGGAAGGCGGACTTGGTGC
CGGTCGGGAGGAGGATGAGGTCGTGTTGAAACTTGCCGAGTTGCAGCAGG
CGGCGAGTGTTCTTGCTGCAGCAGATCAGGAGGCCGTAATCACCCTTGAA
GAAAAGTTGGAGCAGGTCGAAGAGAAGCTTGGGCAGCAGGAAAGCAACGG
GATGTCGCTGCAAGTAGGCACCGAGGATGACGAGGATGCAGAGGCGGACG
CGGAGGAACATAAAGCGGAGGCTGATGGTGAGGATGCAGGAGTAGAGGCA
GTAGGACATGGAGCACCAGGAGCAGAGGCAGCAAAGGCGATGGCACCAGA
AGTCGACGCAGTAGACATCGTTACAGGAAACGCTATAGAGGAGGCGGTAG
ATGAAGCAGCATCTAAAACATCGGGCTTGGAGGCGGAGAACGAGGACGAG
GCGCCGACAGCCCCCCCCGGAGGCGGGGCACTCGGGACGGAAGCAGATAA
CGCTCCGGGGGCAGGCGACAGGAGGCGGCGGGCTGTGGGCCGCCAACTTG
ACGGCTTCATTGACGGGTGGCGGGGAGCTCTGGGAAGCTACGACGGGCTC
CTGAAGAGGCATTACCTTAAGATGTCTTTTGGCCAGGCAACGGCACTCGG
GGTCATGGGCGACACAATCGCCCAGCGGCTGGAGAGGAGGTTGAATCCCG
GGCAACGGTATGAGTTGAAGCGCACGCTGCACGCTGGCATTCTCAACATG
ATCATAGGCAACGGCACTCGGGGTCATGGGCGACACAATCGCCCAGCGGC
TGGAGAGGAGGTTGAATCCCGGGCAACGGTATGAGTTGAAGCGCACGCTG
CACGCTGGCATTCTCAACATGATCATAGACGGTGTCTTCACACCGCGATG
GTACAACCTGGTGGACTCCGTGAATAGCGAGATGACGCTGGCGATCGCGT
TCGTGAAAGCCATTACGGCGAGTGTGTTTTACGGCCCATTCGCCAATGGG
CTTTTCCTTGCCGGCGCCCGGACACTTCGCTACGGACTCAAGACGGTGTC
TTCACACCGCGATGGTACAACCTGGTGGACTCCGTGAATAGCGAGATGAC
GCTGGCGATCGCGTTCGTGAAAGCCATTACGGCGAGTGTGTTTTACGGCC
CATTCGCCAATGGGCTTTTCCTTGCCGGCGCCCGGACACTTCGCTACGGA
CTCAAGGGGCGGCGCTTCGATTGGAGGGAGTGGATGCGGCAGCTGAAGAT
TTGCACGATTCGAGATTTCGAGGGGCGGCGCTTCGATTGGAGGGAGTGGA
TGCGGCAGCTGAAGATTTGCACGATTCGAGATTTCGAGATGTGGCCGCCG
TTGCACATCCTGAACTTCTGGTTGGTGCCGAAGCATTGGCGTCCCCTGGC
CGGGCACCTTGCAGGAGTGGTTCTCCTGGCGGTGATATCTTCGACCGATC
TCACGGACGAAAGCTTGCCCTTCGGGCAGCGCGCCGTACCTCTCATGATT
TGCTGGGCGAAAGCGATCTGCGGACGGCTCGGTGGGAAAGGGCGGCGAGC
CACCGGCGCCCCGCCAGTCGGAAGGGGCTAGATGTGGCCGCCGTTGCACA
TCCTGAACTTCTGGTTGGTGCCGAAGCATTGGCGTCCCCTGGCCGGGCAC
CTTGCAGGAGTGGTTCTCCTGGCGGTGATATCTTCGACCGATCTCACGGA
CGAAAGCTTGCCCTTCGGGCAGCGCGCCGTACCTCTCATGATTTGCTGGG
CGAAAGCGATCTGCGGACGGCTCGGTGGGAAAGGGCGGCGAGCCACCGGC
GCCCCGCCAGTCGGAAGGGGCTAG
back to top