mRNA_P-fluviatile_contig1.467.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: D8LNF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNF5_ECTSI) HSP 1 Score: 348 bits (892), Expect = 3.020e-110 Identity = 183/242 (75.62%), Postives = 206/242 (85.12%), Query Frame = 1
Query: 295 PSPTKTCKLNHSPSDADNKQLPAAA---GRAVTVTAEGAGPTDSERVEAQALSSVGLAVGSRLEVMWLLEDDEKSVEKWWGCSVAGAKTGEREEGEGRPVFTLHYDAYEAFEEANHDVCFVDRYRLVHLEDGSEMTWKREGEEVDREAVLASLADEDVDLQEVMAAQEEENDGQSAESIETQGMEALAQLPHHQQVAMAAGFRRMADVVKEHLRAKM-QDGGDVVVSAADIENMFRDVRGGG 1008
P +KT K N S ++ P A G V VTAEGA PTDSERVEA+ L S+GLAVG+RLEVMWLLEDD+KSVEKWWGCSVAGAKTGER+E EGRPVFTLHYDAYEAFEEA+HDVCFVDRYRLVHLEDG+EMTWKREGEEVDREAVLASLADEDV+LQEVMAAQEEE+ + AES+ET+ M+A+AQLP HQQ AM AG+RRMADV+K+HLRAK+ Q GG+ VVS AD+ENMFRDVRG G
Sbjct: 41 PPASKTSKPNSSEDKKKDEVQPTPASGGGVVVPVTAEGAQPTDSERVEAECLRSLGLAVGTRLEVMWLLEDDDKSVEKWWGCSVAGAKTGERDEEEGRPVFTLHYDAYEAFEEADHDVCFVDRYRLVHLEDGAEMTWKREGEEVDREAVLASLADEDVNLQEVMAAQEEEDANEGAESVETRSMKAIAQLPPHQQAAMMAGYRRMADVIKKHLRAKITQTGGETVVSEADVENMFRDVRGSG 282
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: A0A8J4C7I1_9CHLO (Uncharacterized protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C7I1_9CHLO) HSP 1 Score: 104 bits (260), Expect = 2.100e-21 Identity = 72/215 (33.49%), Postives = 112/215 (52.09%), Query Frame = 1
Query: 403 GPTDSERVEAQALSSVGLAVGSRLEVMWLLEDD-EKSVEKWWGCSVAGAKTGEREEGEGRPVFTLHYDAYEAFEEANHDVCFVDRYRLVHLEDGSEMTWKREGEEVDREA----------------------VLASLADEDVDLQEVMAAQEEENDGQSAESIETQGMEALAQLPHHQQVAMAAGFRRMADVVKEHLRAKMQDGGDVVVSAADIE 978
G ++++E + L ++G+ VG R+EV W++E D E++ +WWG ++ G E G PV+ L YD Y AFE+ + V F+ ++L L + E+TW+REG+E D + VL S+AD + +QE A GQ + +E Q AL L +++A+AAGFR D + E LR + G D VV+A DI+
Sbjct: 34 GNFQNDKIEIRKLDAIGVTVGGRVEVKWMVEPDGEEAYLRWWGATIVGPSNQPDVERPGAPVYELLYDNYGAFEQERNHVVFIGEHKLHQLGEAGELTWRREGDEWDDDCDEXXXXXXXXXEREEGIRTEGDVLYSMADLNRMVQEDFA-------GQDLDELERQ---ALQSLEPSKRIAVAAGFRDFTDDLSEFLRERC--GQDGVVTADDIK 236
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: A0A8J4LMH7_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LMH7_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 1.110e-19 Identity = 72/213 (33.80%), Postives = 111/213 (52.11%), Query Frame = 1
Query: 388 TAEGAGPTDSERVEAQALSSVGLAVGSRLEVMWLLEDD-EKSVEKWWGCSVAGAKTGEREEGEGRPVFTLHYDAYEAFEEANHDVCFVDRYRLVHLEDGSEMTWKREGEE-----------VDREAVLASLADEDVDLQEVMA----AQEEENDGQSAESIETQGMEALAQLPHHQQVAMAAGFRRMADVVKEHLRAKMQDGGDVVVSAADIE 978
T + G +++ E L ++G+AVG R+EV WL+E D E++ +WWG ++ G E PV+ L YDA+ FE+ V F+ +++ LE+ E+TW+REG+E D EA + D D+ MA +E+ GQ + +E Q AL L +++A+AA FR AD + E LR + G D VV+A DI+
Sbjct: 29 TTQATGNFQNDKFEFPKLDALGVAVGGRIEVKWLVEPDGEEAYFRWWGATIVGPSNQPDVERPAAPVYELLYDAHGDFEQERSHVVFIGEHKMHQLEETDELTWRREGDEWDDGCDEDEGSEDAEAEMEEGIRTDGDVLYTMADVKRMVQEDLAGQDLDELERQ---ALQSLEPSKRIAVAAEFRDFADNLSEFLRERC--GQDGVVTADDIK 236
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: A0A7S2YY04_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YY04_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.020e-7 Identity = 56/221 (25.34%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 415 SERVEAQALSSVGLAVGSRLEVMWLLEDD-------EKSVEK-WWGCSVAGA--KTGEREEGEGRPV------------FTLHYDAYEAFEEANHDVCFVDRYRLVHLEDGSEMTWKREGEEVD---REAVLASLADEDVDLQEVMAAQEEENDGQSAESIETQGMEALAQLPHHQQVAMAAGFRRMADVVKEHLRAKMQDGGD-VVVSAADIENMFRDVR 999
S++ + +GL +GS +EV+W + E S+++ WW + K G+ E EG+ + L Y YEAFEE V F+D + L+ +D + W+ +G + + R+ + A+ D +V+A D A+++ ++GM L ++P +Q A+ +R MAD K+ LR +++ G+ V D+ M ++
Sbjct: 88 SQKCNLHPVKDLGLRIGSTIEVLWEIASPDAVDATGEASLDRVWWAGQLVAEEEKEGQEEVQEGQEAEAGSLPFAASSKWRLRYQKYEAFEEEERTVVFLDPHLLLDFDDMQVLEWREDGSDYEPEMRQRPEFAAAERD----DVVAI----GDMAGADAV-SEGMRELNKMPFDKQQIFASSYRVMADSFKQKLREILKNKGEGYVFGEEDVRTMIEGIK 299
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: C1DYK3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1DYK3_MICCC) HSP 1 Score: 58.2 bits (139), Expect = 1.940e-5 Identity = 62/213 (29.11%), Postives = 97/213 (45.54%), Query Frame = 1
Query: 424 VEAQALSSVGLAVGSRLEVMWLL-EDDEKSVEKWWGCSV-AGAKTGEREEGEGRPVFTLHYDAYEA--FEEANHDVCFVDRYRLVHLEDGSEMTWKREG---EEVDREAVLASLADE-------------DVDLQEVMAAQE----EENDGQSAESIETQGMEALAQLPHHQQVAMAAGF----RRMADVVKEHLRAKMQDGGDVVVSAADIE 978
VEA ++GL+ G RLEV W++ +DD++ WW C++ A +G E LHYDA EA F F + + +G + W+REG ++VD + D D+ L++++ Q E N G+ +E GM A LP +Q AMA F R+ ++KE L+A+ G V++ DI+
Sbjct: 66 VEASVAPNLGLSEGDRLEVRWVITDDDDEDTVVWWPCTLRAIVPSGPSASWE------LHYDANEAHGFAAEVRPATFTNSRWVHDPGEGQHLRWRREGSTEDDVDDDXXAGDADDPNIVYAAEIDPDEGDLSLEDLVNRQRVVDAERNGGEGG--LEAAGMATFASLPMERQHAMAGAFLDMKERITSLIKE-LQARHGPG--YVITKDDID 267
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Match: A0A7S2YY33_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YY33_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 3.220e-5 Identity = 47/180 (26.11%), Postives = 84/180 (46.67%), Query Frame = 1
Query: 514 EKWWGCSVAGA--KTGEREEGEGRPV------------FTLHYDAYEAFEEANHDVCFVDRYRLVHLEDGSEMTWKREGEEVD---REAVLASLADEDVDLQEVMAAQEEENDGQSAESIETQGMEALAQLPHHQQVAMAAGFRRMADVVKEHLRAKMQDGGD-VVVSAADIENMFRDVR 999
E+WW + K G+ E EG+ + L Y YEAFEE V F+D + L+ +D + W+ +G + + R+ + A+ D +V+A D A+++ ++GM L ++P +Q A+ +R MAD K+ LR +++ G+ V D+ M ++
Sbjct: 3 EQWWAGQLVAEEEKEGQEEVQEGQEAEAGSLPFAASSKWRLRYQKYEAFEEEERTVVFLDPHLLLDFDDMQVLEWREDGSDYEPEMRQRPEFAAAERD----DVVAI----GDMAGADAV-SEGMRELNKMPFDKQQIFASSYRVMADSFKQKLREILKNKGEGYVFGEEDVRTMIEGIK 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.467.1 >prot_P-fluviatile_contig1.467.1 ID=prot_P-fluviatile_contig1.467.1|Name=mRNA_P-fluviatile_contig1.467.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=181bp MWLLEDDEKSVEKWWGCSVAGAKTGEREEGEGRPVFTLHYDAYEAFEEANback to top mRNA from alignment at P-fluviatile_contig1:5193751..5198542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.467.1 ID=mRNA_P-fluviatile_contig1.467.1|Name=mRNA_P-fluviatile_contig1.467.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4792bp|location=Sequence derived from alignment at P-fluviatile_contig1:5193751..5198542- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5193751..5198542- >mRNA_P-fluviatile_contig1.467.1 ID=mRNA_P-fluviatile_contig1.467.1|Name=mRNA_P-fluviatile_contig1.467.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1086bp|location=Sequence derived from alignment at P-fluviatile_contig1:5193751..5198542- (Porterinema fluviatile SAG_2381)back to top |