mRNA_P-fluviatile_contig1.465.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A835ZGM2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM2_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.030e-37 Identity = 70/140 (50.00%), Postives = 92/140 (65.71%), Query Frame = 1
Query: 4 RIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSI-DPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLKSSAY 420
RIE+ +IPARFL TLGH + V ++ +K + AGL+ P+ D+A ANS+VN AL A+ CF LDF + FG S FM KVN LQ + HF G +L + V+EEWDYR W IV +CNVP AI E+ V+ +F LK +Y
Sbjct: 4 RIEEALIPARFLTTLGHFLAVLILAGSKATVVNAGLAGGQPSADDIAAANSEVNGALIFALFCFLLDFAGLGFGFSAFMPKVNALQILVHFAGGVLTSRLVVEEWDYRVFWYIVAMCNVPAAIAELLVMALIFGLKVYSY 143
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A7S2UVK1_9STRA (Transmembrane protein 107 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK1_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.140e-36 Identity = 63/140 (45.00%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 1 MRIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLKSSAY 420
M +E R+IPARFL+TLGHL+ +V + +YAGLS D T ++A A +++ A+ LA++CF +D + + G +IF +VNV Q +AHFVG I ++ F+ E WDYR LW IV CNV TA+VE+ V+ +F +++ Y
Sbjct: 1 MGLERRLIPARFLITLGHLIPTVMVMYVMEEQVYAGLSADATDKEIAAATAELEGAVLLAIICFLVDLLGLVAGFTIFSTRVNVFQIIAHFVGGIQVSTFIHEVWDYRVLWYIVVFCNVTTALVEIFVILRIFVVRALLY 140
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: D8LNF7_ECTSI (Transmembrane protein 107 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF7_ECTSI) HSP 1 Score: 128 bits (321), Expect = 2.950e-35 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 1
Query: 1 MRIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMK 243
M+IEDRVIPARFLVTLGHLVGV L+ KTK+DN+YAGLS DPT +VATAN VNAAL LAMVCFGLDF+S+FFGLSIFMMK
Sbjct: 1 MKIEDRVIPARFLVTLGHLVGVILISKTKSDNVYAGLSSDPTAAEVATANGHVNAALALAMVCFGLDFMSLFFGLSIFMMK 81
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: F0YLV6_AURAN (Transmembrane protein 107 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLV6_AURAN) HSP 1 Score: 117 bits (293), Expect = 3.620e-31 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 22 IPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLK 408
IPARF++T+GHLV + ++ TK +NI AGL DP A ++ AA + + CF D V I G S+F K N+LQ + HF G +L+++ + + W Y+ +W +V CNVPTA+ E+A+L +F LK
Sbjct: 2 IPARFMLTMGHLVSLLMIVYTKKENILAGLPRDPGKARYDEAKAEFEAAYVVCLACFVFDMVGILTGTSLFFPKANLLQIICHFAGGVLVSSMIAQSWQYQYIWLVVAFCNVPTALCEIAILVAIFVLK 130
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A7S3NE17_9STRA (Transmembrane protein 107 n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NE17_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.700e-31 Identity = 52/135 (38.52%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 4 RIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLK 408
R+ + +IPARF++T+GHLV + ++ TK +N++AGL +DP+ + A + A L+++CF D IFFG SIF +K+N+LQ + HF G ++++ + + W Y+ +W I+ + N PTA E+A+L +F L
Sbjct: 5 RVLEVLIPARFVLTVGHLVAMLMIAYTKRENLFAGLPVDPSNTRLDKAKKEFEIAYILSLICFAFDLFGIFFGTSIFFVKMNLLQIICHFTGGVMVSLMIEQAWQYQYIWLILAITNFPTAFFEIAILIAIFGLN 139
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A8J2S4M7_9STRA (Transmembrane protein 107 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4M7_9STRA) HSP 1 Score: 101 bits (251), Expect = 8.870e-25 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 22 IPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLK 408
IPARFL+T+GHLV V + T+ +N+ + +S DP A + A + +VCF +D + I G S+F K N+LQ + HFVG+ I + + + W Y+ +W + CN+P A+ EV++L F LK
Sbjct: 10 IPARFLLTVGHLVSVLTMVHTRKENLSSAVSADP-----KDAQKEFMMAYAICLVCFAVDVLGILMGTSLFFPKANLLQIICHFVGSCFITSMITQSWQYQYIWFSIATCNIPCALCEVSILIGTFALK 133
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A6H5JQF3_9PHAE (Transmembrane protein 107 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF3_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.390e-24 Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 241 KVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLKSSAY 420
+VN LQTVAHF GA+LIA+F+ E WDYR LW+IVG C+VPTAIVEVAVLF+VF+LKSS Y
Sbjct: 14 RVNALQTVAHFSGAVLIAHFISEAWDYRCLWQIVGCCSVPTAIVEVAVLFSVFHLKSSVY 73
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A3P3Y2A6_PLABS (Transmembrane protein 107 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2A6_PLABS) HSP 1 Score: 94.4 bits (233), Expect = 5.110e-22 Identity = 54/135 (40.00%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 1 MRIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLF-TVFY 402
M IE ++P RFL+T HL+ + +F +K NI A L I T V ++ N+ + AAL +A+VCF ++++ +F G+SI N VAHF+GAILIA+F +E W+ ++W +V ++ A++E +VL TV Y
Sbjct: 1 MGIESTLLPTRFLLTTVHLMAILTLFNSKDANIRAALPISYTTVQYSSMNNQMLAALWIAVVCFIVEYLGMFSGVSIMKHAHNSFYVVAHFIGAILIASFALESWNMLAIWYVVIPLSLVPALLEASVLAQTVLY 135
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A7S3HJZ1_9STRA (Transmembrane protein 107 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.020e-21 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 7 IEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCNVPTAIVEVAVLFTVFYLKSSAY 420
++ +I ARF+ T+GH + + L+F T +NI L + + A AAL + +CF DF +FFG S+F N+ + HF+G IL++ V W+Y++LW IV CN+PTA+ E+++L + K Y
Sbjct: 4 VQQYLISARFITTMGHFIALLLLFSTIDNNIDESLGDNYDSEEKQWATETSWAALIIGFLCFVCDFAGLFFGTSLFYNTGNMFHILVHFIGGILLSWVVTYSWNYKALWPIVATCNIPTALYEISILLGIKVFKIIVY 141
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Match: A0A1S8W9G7_9FUNG (Transmembrane protein 107 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W9G7_9FUNG) HSP 1 Score: 70.5 bits (171), Expect = 1.460e-11 Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 1 MRIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANSDVNAALTLAMVCFGLDFVSIFFGLSIFMMKVNVLQTVAHFVGAILIANFVIEEWDYRSLWRIVGLCN 354
M I +IPARFLVT+GHL+ + F TK NI + L I T+ D + AAL L + F ++F + G ++F + + VAH G I ++ F+ E W Y + W I C
Sbjct: 1 MTILSSIIPARFLVTIGHLIATIMAFLTKDSNIMSALPISSTL-DYRAFEQSLVAALILTWILFVIEFSGLLSGRTMFCTASSTIHIVAHAAGMISLSLFMTEGWHYITYWYIFIFCR 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.465.1 >prot_P-fluviatile_contig1.465.1 ID=prot_P-fluviatile_contig1.465.1|Name=mRNA_P-fluviatile_contig1.465.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=141bp MRIEDRVIPARFLVTLGHLVGVTLVFKTKTDNIYAGLSIDPTVVDVATANback to top mRNA from alignment at P-fluviatile_contig1:5181732..5184193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.465.1 ID=mRNA_P-fluviatile_contig1.465.1|Name=mRNA_P-fluviatile_contig1.465.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2462bp|location=Sequence derived from alignment at P-fluviatile_contig1:5181732..5184193- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5181732..5184193- >mRNA_P-fluviatile_contig1.465.1 ID=mRNA_P-fluviatile_contig1.465.1|Name=mRNA_P-fluviatile_contig1.465.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=846bp|location=Sequence derived from alignment at P-fluviatile_contig1:5181732..5184193- (Porterinema fluviatile SAG_2381)back to top |