mRNA_P-fluviatile_contig1.461.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI) HSP 1 Score: 450 bits (1158), Expect = 1.000e-150 Identity = 235/328 (71.65%), Postives = 274/328 (83.54%), Query Frame = 2
Query: 92 LLLSLALQLHSGYSFLLPATAATHCHHISRPAPSSKTTALASAPTHVQAEEGGG---DEEQELEQ---DSALTSPAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDGDMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
LLL LALQL +G SFLLP+ A T C + + S+ + ++ AEE ++E ++E D SP+GLTL+GVYKRL +ETQ ADGVVGLESKD DY IEVVKV+++R PSLG+QLEEVARGGDGRGLVL+AG+EP GNAEA+GKI VGDTLCSAGI+GDMSRVEALDWDQTV+VLG FA ESEIVLVIKRLVKRESI VQF LP GSR+++IKAGSNLRGEM+R ++PVYDP+T RFDQPYATGNCAGEGTCGTCFVE+Q+GADLLT PD+EEL+LLSR NLPVRWRLSCKVIVGKENKAGTV++KA+PQAEWRS+
Sbjct: 9 LLLLLALQLRNGASFLLPSPAITRCSGFA--SRSASCGVMRASEADGDAEETASLNVEDEAKVEDEGDDGLARSPSGLTLDGVYKRLTLETQSRADGVVGLESKDTDYAIEVVKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQ 334
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.370e-71 Identity = 133/271 (49.08%), Postives = 181/271 (66.79%), Query Frame = 2
Query: 302 GLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDG--DMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPG-----------GSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEKKK*TQ 1075
G++LEG+YKRLK+E L +G++GLES+DP +GIE+V RGLVLI V GNA +G I GDTL G + DM+RVE D+D TVA LG++A +EI LV+KRLV+R++++V F P G + + AGSNLR EM+RR+IPVYD +T RFDQPYATGNC GEG CGTCFVE+QEGA+LL+PPD E +++ NLP RWRLSC+ +VG +N+AG V++++IPQ+ + +E+K+ T+
Sbjct: 41 GVSLEGIYKRLKIEILDLDEGIIGLESRDPAFGIEIV-----------------------RGLVLIGDV--GGNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMR--NLPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAYVAERKRDTR 284
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK) HSP 1 Score: 234 bits (596), Expect = 1.810e-67 Identity = 124/259 (47.88%), Postives = 167/259 (64.48%), Query Frame = 2
Query: 275 QDSALTSPAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGID-GDMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSR-EYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAE 1045
+D + GLTLE + KM L +G+ GL+++D +YGIE+ K V R+ LGL L E+ G DGRGLVL+ V GNA TG+ VGD L G + GDM+RVE LD+D T+A LG++A + LV KRLV+R+ ++V P GS + ++ AGS LRGEM+R+ + VYDP RFDQPY TGNC GEG CGTC V + EG +LL+ PDR E ++L + P R+RLSC+ IVG N+ G V +K++P E
Sbjct: 57 EDGVTRNADGLTLEEIAGLFKMSVFDLDEGLYGLDTRDVNYGIEIAKARVSREGGLGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.580e-57 Identity = 122/274 (44.53%), Postives = 159/274 (58.03%), Query Frame = 2
Query: 296 PAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKR-DPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEAT----GKIFVGDTLCSAGIDG-DMSRVEALDWDQTVAVLGRF--AGESEIVLVIKRLVKRESIKVQFAL-PGGSREYD----------IKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEK 1060
P LTLE + ++K E L G GLESKD Y +E+ KV++ + +GL LEE+ RG DGRG VL++ + P+GNA GKI VGD +C G + M R E LD++QT+ L RF G I LV+KRLV R S+ V + PG E + AGS LR E++R +PVY TLRFDQPY TGNC GEG CGTC V++ EG +LL D E ++ + WRLSC+VIVG N GTV+ K +PQA + +K
Sbjct: 12 PPPLTLEEISNKIKFEITDLDAGAYGLESKDVAYAVEIAKVDIPLGEGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGA-ANWRLSCRVIVGATNTPGTVRFKLMPQAPFTKKK 284
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA) HSP 1 Score: 191 bits (485), Expect = 5.650e-53 Identity = 101/205 (49.27%), Postives = 139/205 (67.80%), Query Frame = 2
Query: 482 RGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDGDMSR----VEALDWDQTVAVLGRFAGES---EIVLVIKRLVKRESIKVQFALP-GGSREYDIKAGSNLRGEMMRREIP--VYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEKKK 1066
RGLVL+ + P GNA + KI VGDTLC A +R +EA+D D T+ LG + S ++VL+ KRLVKRE + V+ ALP GG + + +GSNLRGEM+R+ +P +YDP+T R+DQP+ TGNC GEG CGTC +E+ +G ++L+ D E +LL N P+RWRLSC+ VG +NK+G+VKV+A+PQ E R +KK
Sbjct: 1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAADPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLE--NQPIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMRESRKK 203
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.290e-51 Identity = 109/258 (42.25%), Postives = 153/258 (59.30%), Query Frame = 2
Query: 305 LTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGD---GRGLVLIAGVEPDGNAEATG-KIFVGDTLCS-AGIDGDMSRVEALDWDQTV-AVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSRE-YDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
L++E + RL ++ + DG GL +DP YG++VVK VKR PSLG+ L E+ D R LVL+ G+E GNA A G + VGD + + A G E D+D + ++G G E+ LV+ RLV+R + + + LP G R AGSNLRG ++ + +YD +T RFD PYATG+CAGEG CGTC V + G DLL+P DR E L+ P+ WR +C+V VG +N+ GTV+V+ PQ+ + E
Sbjct: 58 LSVEDIADRLAIQVFDMDDGKFGLSCRDPAYGLKVVKTSVKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNEALICK--GRPMGWRAACRVFVGADNQEGTVEVRLQPQSRFDDE 311
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.340e-51 Identity = 112/274 (40.88%), Postives = 164/274 (59.85%), Query Frame = 2
Query: 281 SALTSPAGLTLEGVY---KRLKMETQGLADGVVGLESKDPDYGIEVVKVEV---KRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGI-DGDM-SRVEALDWDQTVAVLG-----RFAGESEIVLVIKRLVKRESIKVQFALPGGS-REYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPD-REELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
S+ T +T E +Y +RLK+E L +G+ G +S+DP YG+EV++ E+ +PSLGL L E+A DGRGLVL++ V + + I VGD + DG + R L++D+TV +G G+ + L + RLVKR +I+VQ PG + + AG NLR ++R++I +Y+ +T RFD PYATG+CAGEG CGTC V + EG DLL P D EEL+ R P+ WR SC+ +VG N+ GT++V+ PQ+++ E
Sbjct: 109 SSRTDDMEITDEKLYEIARRLKLEIFDLEEGIFGFDSQDPVYGLEVIQTEIPLSSENPSLGLVLTEMAGNKDGRGLVLVSEVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVGDVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAEELITRGR---PLSWRASCRTVVGSNNEGGTIQVRVQPQSDFEDE 379
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC) HSP 1 Score: 164 bits (415), Expect = 9.410e-42 Identity = 102/268 (38.06%), Postives = 149/268 (55.60%), Query Frame = 2
Query: 290 TSPAGLTLE----GVYKRLKMETQGLADGVVGLESKDPDYGIEVV--KVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSA-GIDGDMS-RVEALDWDQTVAVLGRFAGESE---IVLVIKRLVKRESIKVQFALPGGSREY-DIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
T+ G TL+ + ++ K+E L +G+ G +SKD YG+EVV ++V D LGL L E+A DGRGLV+++ + + I VGDT+ DG + RV A ++D+TV +GR S I L + RL+KR ++V+ G + + AG NLR MR+++ +YD +T RFDQP+ TGNC G+G CGTC V + +G DLL P D E+ + P WR SC+ VG N GT+++ PQ+E E
Sbjct: 38 TASQGATLDQHLMDLAQKFKLEIFDLDEGLFGFDSKDNRYGLEVVHTNIDVGND-GLGLVLTEMAGSPDGRGLVMVSKITGNAAKANPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKRLPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDSHEVFITK--GRPPSWRASCRTTVGFNNVGGTLRISLHPQSELPEE 302
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: D8U521_VOLCA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U521_VOLCA) HSP 1 Score: 61.2 bits (147), Expect = 8.080e-8 Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 2
Query: 722 GGSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLL---TPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQ 1039
G S +++G LR +M ++ +Y + C G G CGTC VE+++GA+LL TP ++++L + P WRL+C+ +VG G V + PQ
Sbjct: 13 GQSLNISVESGDILRTVLMAEKVDLYTTWGKVWQ-------CGGVGNCGTCIVEVRDGAELLSERTPVEKKKL-----SGKPATWRLACQTLVGDGESTGVVTIATKPQ 109
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A2J8AI05_9CHLO (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AI05_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 1.670e-7 Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 2
Query: 830 YATGN----CAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQ 1039
Y T N C G G CGTC VE++EGA+LL+ E LS P WRL+C+ +VG K+G V V PQ
Sbjct: 19 YTTWNKVWQCGGVGQCGTCIVEVKEGAELLSERTAVEKKKLS--GKPESWRLACQTLVGDGEKSGAVTVATKPQ 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.461.1 >prot_P-fluviatile_contig1.461.1 ID=prot_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=345bp MSTTLSLGNTTRRASTLAFLLLSLALQLHSGYSFLLPATAATHCHHISRPback to top mRNA from alignment at P-fluviatile_contig1:5145074..5149064- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.461.1 ID=mRNA_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3991bp|location=Sequence derived from alignment at P-fluviatile_contig1:5145074..5149064- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5145074..5149064- >mRNA_P-fluviatile_contig1.461.1 ID=mRNA_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2070bp|location=Sequence derived from alignment at P-fluviatile_contig1:5145074..5149064- (Porterinema fluviatile SAG_2381)back to top |