mRNA_P-fluviatile_contig1.456.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.456.1 vs. uniprot
Match: D8LNE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE5_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 6.100e-157 Identity = 333/574 (58.01%), Postives = 366/574 (63.76%), Query Frame = 3
Query: 1578 GNVSARQFADTATKLGTTLFAFIKAQVLQARRAREGSLAAAARVHRRASSPEAAAAVVDANLAGGNRTA---------AGADGDGAASATGASPEAWAKLSYLTYTRDRTSEKVPFPAGMVVLLKALSEVLNHCVGTGDLA-----------------------------------------------------------IRLSVTLEDLTVYVAQRADKERESITRQLSGPVDAVKDKLGEMEQTLAGFERTMHLVLSEVDADRERSAAIAALGMTVKNMQGLFSRLKDDLESKAGASEIEKALEDMTFKINQTANEQTRLQRLGRALGNDHNSSTPMKRLQIELEQARAVALLSMASSDQNPLIGSKCLSCNRPLGGFSLPQTLKGHDEWFTGAGSLGGPKDRVLEVAGKDERIDAGGSSSGAAXXXXXXXXXXXA--GIGSSRPPGRTQPVMTPAKILPLGSASASSES--PGTLPKKSLQGPLLFERTGS---VGGXXXXXXXXXXXXXXXXAVVGLKGRVLRGGXXXXXSLPADANASISKYPRLVPLTAPKSAPASGKLYQTNTGGAT 3074
G F+D AT LGTTLFAF+KAQVLQARRA +G G++G +S +GASP+AW KL+ LTYTR TSEK+PFPAGMVVLLKALS VLNHCVGTGDLA IRLSVTLEDLTVYVAQRADKERES+ RQLS PVD+VK KLGEME TLAGF+RTMHLVLSEVDADRERS AIA LG TV+ MQGLFSRL +L SKAGASEIEKALEDMT KIN++ANEQT+LQRLGR LG D NSS MKRLQIELEQARA A+LSM SD++ LIGSKCLSCNRPLGGF PQ KG DEW+TGAG LGG DRV+EV G++ GGS G XXXXXXXXX + GIG+SR PGRTQPVMTP KI P GSA+ASS S PGT+P K QGPLLFERTG+ VGG GLKGR+LRGG X S+ AD N S+SKYPRLVPLTAPKSAP KLY TN GAT
Sbjct: 643 GGEEREHFSDRATDLGTTLFAFVKAQVLQARRAEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSEGV-ESSTSGASPQAWVKLNCLTYTRHGTSEKMPFPAGMVVLLKALSNVLNHCVGTGDLAVGTCVCFDLTEAPNHFTTPRLSLFKTWVRTTLTRNAPHKSPGCPPRKLKRHNDRIAKIKIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDSVKGKLGEMENTLAGFQRTMHLVLSEVDADRERSQAIADLGTTVETMQGLFSRLSKELSSKAGASEIEKALEDMTLKINKSANEQTKLQRLGRVLGKDQNSSVAMKRLQIELEQARATAILSMVPSDKDVLIGSKCLSCNRPLGGFGTPQVPKGLDEWYTGAGGLGGRNDRVVEVGGEN-----GGSGHGEQGXXXXXXXXXSSVNGIGTSRTPGRTQPVMTPGKIAPRGSATASSASGEPGTVPPKGPQGPLLFERTGTTDDVGGSGGP---------------GLKGRLLRGGGGXSGSVSADGNVSVSKYPRLVPLTAPKSAPTVEKLYSTNGRGAT 1195
BLAST of mRNA_P-fluviatile_contig1.456.1 vs. uniprot
Match: A0A6H5JL36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL36_9PHAE) HSP 1 Score: 387 bits (995), Expect = 4.350e-119 Identity = 283/534 (53.00%), Postives = 319/534 (59.74%), Query Frame = 3
Query: 1479 GGIRHLLANFSQQSRELEAEIGDPLARAKDIVAGNVSAR-----QFADTATKLGTTLFAFIKAQVLQARRAREGSLAAAARVHRRASSPEAAAAVVDANLAGGNRT------------AAGADGDGAASATGASPEAWAKLSYLTYTRDRTSEKVPFPAGMVVLLKALSEVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESITRQLSGPVDAVKDKLGEMEQTLAGFERTMHLVLSEVDADRERSAAIAALGMTVKNMQGLFSRLKDDLESKAGASEIEKALEDMTFKINQTANEQTRLQRLGRALGNDHNSSTPMKRLQIELEQARAVALLSMASSDQNPLIGSKCLSCNRPLGGFSLPQTLKGHDEWFTGAGSLGGPKDRVLEVAGKDE---RIDAGGSSSGAAXXXXXXXXXXXAGIGSSRPPGRTQPVMTPAKILPLGSASAS-------SESPGTLPKKSLQGPLLFERTGS---VGGXXXXXXXXXXXXXXXXAVVGLKGRVLRGGXXXXXSLPADANASISK 2990
G IRHLL N S+++R LE EIGD AKDIV + +A Q+ K G + +VLQARRA + G + +S +GASP+AWAKL+YLTYTR TSEK+PFPAGMVVLLKALS VLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERES+ RQLS PVD+VK+KLGEME LAGF+RTMHLVLSEVDADRERS AIA LG TV+ MQ LFSRL ++L SKAGASEIEKALE+MT KIN++ANEQT+LQRLGR LG D NSS MKRLQIELEQ +P KG DEW+TGAG LGGPKDRV+EV G ++ XXXXXXXXXXX PGRTQPVMTP KI+P GSA+A S PG +P K QGPLLFERTG+ VGG GLKGRVLRGG XXXX N S+SK
Sbjct: 116 GAIRHLLVNISERARVLEEEIGDLATLAKDIVMDSPAAMVGEELQWGKEGRKGGE------EREVLQARRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGVE----SSTSGASPQAWAKLNYLTYTRHGTSEKMPFPAGMVVLLKALSNVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDSVKEKLGEMENALAGFQRTMHLVLSEVDADRERSQAIAELGTTVETMQRLFSRLSEELSSKAGASEIEKALEEMTSKINKSANEQTKLQRLGRVLGKDQNSSVAMKRLQIELEQ---------------------------------VP---KGLDEWYTGAGGLGGPKDRVVEVGGGNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRTQPVMTPGKIVPRGSATAXXXXXXXXSGEPGIVPPKGPQGPLLFERTGTTDDVGGSGGP---------------GLKGRVLRGGGXXXXXXXXXXNVSVSK 588
BLAST of mRNA_P-fluviatile_contig1.456.1 vs. uniprot
Match: A0A836C707_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C707_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 9.790e-14 Identity = 84/316 (26.58%), Postives = 133/316 (42.09%), Query Frame = 3
Query: 1872 DRTSEKVPFPAGMVVLLKALSEVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESITRQLSGPVDAVKDKLGEMEQTLAGFERTMHLVLSEVDADRERSAAIAALGMTVKNMQGLFSRLKDDLESKAGASEIEKALEDMTFKINQTANEQTRLQRLGRALGNDHNSSTPMKRLQIELEQARAVALLSMASSDQNPLIGSKCLSCNRPLGGFSLPQTLKGHDE-----------WFTGAGSLGGPK-DRVLEVAGKDERIDAGGSSSGAAXXXXXXXXXXXAGIGSSRPPGRTQPVMTPAKILPLGSASASSES 2783
D S + F G+ LL AL L+ C TG+LA+RLSV + DL + E E T + G +++ + TL +R++HL++SEV+ D R A+ L V +++ + +K ++ +KAGA E++ +L+DM K+ + P Q+ ++ +L ++ LIG+KCL+CNRP S H W+ G K DRVLE + I +SRP G+TQ V+TPA ++ A A+ S
Sbjct: 520 DGLSMECTFAEGLAALLSALKACLDGCTSTGELAVRLSVAVSDLAAFARSTCSAEHE-FTVEHQGKLESQVLAMAGQHDTL---QRSLHLLISEVENDVARREAVKGLEGAVLDLRKAYEMVKAEMGNKAGADELQASLQDMAQKL--------------------QGAVAP----QVLTLTLTSILILILSRF----LIGTKCLACNRPFAS-SYQSLFTAHTNTHGMALANGTAWYPGVKPRPAAKGDRVLEPL---DYI-------------------------TSRPKGQTQAVVTPATLIGESGAEAADAS 774 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.456.1 >prot_P-fluviatile_contig1.456.1 ID=prot_P-fluviatile_contig1.456.1|Name=mRNA_P-fluviatile_contig1.456.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=549bp DDPVECAAITLQNWWREVLDSKLEENSSSGSSTSSREGGEDRKLPASEAEback to top mRNA from alignment at P-fluviatile_contig1:5105042..5112091- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.456.1 ID=mRNA_P-fluviatile_contig1.456.1|Name=mRNA_P-fluviatile_contig1.456.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7050bp|location=Sequence derived from alignment at P-fluviatile_contig1:5105042..5112091- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5105042..5112091- >mRNA_P-fluviatile_contig1.456.1 ID=mRNA_P-fluviatile_contig1.456.1|Name=mRNA_P-fluviatile_contig1.456.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3294bp|location=Sequence derived from alignment at P-fluviatile_contig1:5105042..5112091- (Porterinema fluviatile SAG_2381)back to top |