mRNA_P-fluviatile_contig1.451.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.451.1
Unique NamemRNA_P-fluviatile_contig1.451.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: D8LNE0_ECTSI (eIF-2B GDP-GTP exchange factor subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE0_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 6.250e-148
Identity = 232/252 (92.06%), Postives = 240/252 (95.24%), Query Frame = 2 
Query: 1571 RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETK-HFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLYGEA 2323
            RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGH FVRDGTVVLTHGYSRCALHLLLMAAETK   +  + EGRPDGAGFKAAA L+K GVPVTVVLDSAVGYHME+ADLCVTGAEGVLENGGIVNKVGTFQMAVLAK +NVPFYVAAESYKFARLFPLDQRDLP+GKIPRAPFAAP GTP+SVATFSP+VDYTSAEYITLLFTDLG LTPSAVSDELIRLYGEA
Sbjct:   69 RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHNFVRDGTVVLTHGYSRCALHLLLMAAETKVTLACSLREGRPDGAGFKAAAALSKVGVPVTVVLDSAVGYHMEMADLCVTGAEGVLENGGIVNKVGTFQMAVLAKAYNVPFYVAAESYKFARLFPLDQRDLPKGKIPRAPFAAPEGTPESVATFSPSVDYTSAEYITLLFTDLGALTPSAVSDELIRLYGEA 320
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: A0A835YUA3_9STRA (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA3_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.070e-97
Identity = 167/250 (66.80%), Postives = 201/250 (80.40%), Query Frame = 2 
Query: 1571 RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSG--TPDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            +STI+L+SGC+LFLR+V+R    S+    F E CK+Q+LHRGE+FAE+S TSR +IA LGH FVRDG V++THGYSR    LLL AA+TKHF++++ EGRP+GAGF+AAAV +KAG+PV+V+LDSAVGY ME  DLCV GAEGV+ENGG+VNKVGT QMAV+AK  + PFYVAAESYKFARL+PL+QRDLPEG+ P        G   P  V   +P VDYT A+YITLLFTDLGVLTPSAVSDELIRLY
Sbjct:   75 KSTIALSSGCELFLRYVTRC---SLDFPNF-EDCKKQVLHRGEKFAEMSVTSRVRIAELGHGFVRDGAVIMTHGYSRVVASLLLRAAQTKHFTIMIPEGRPEGAGFEAAAVFSKAGIPVSVILDSAVGYFMEQVDLCVVGAEGVVENGGVVNKVGTCQMAVVAKALHKPFYVAAESYKFARLYPLNQRDLPEGRTPMIRLDPVGGEPAPPGVDCTNPCVDYTPADYITLLFTDLGVLTPSAVSDELIRLY 320
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: A0A6G0WSA6_9STRA (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSA6_9STRA)

HSP 1 Score: 283 bits (724), Expect = 5.830e-84
Identity = 152/254 (59.84%), Postives = 188/254 (74.02%), Query Frame = 2 
Query: 1574 STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSV-------ATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            S IS+T+GCQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S TSR++IA LGH FVRDG VVLTHG SR    LLL AA+TKHFSV+V EGRP+GAG+K A  L+ AG+P TV++D+A+GY+ME AD+ + GAEGV+ENGGIVNK+GTF  A++AKT N PFYVAAESYKFARL+PL+Q D P          + +  P+ V          SP+ DYT  +YI+LLFTDLGVLTPSAVSDELI+LY
Sbjct:   80 SPISVTAGCQLFLRYVTRCFLEF---DDFDQ-CKAQLIDRGKLFAETSSTSRKRIADLGHNFVRDGMVVLTHGASRVVTKLLLQAAQTKHFSVVVTEGRPNGAGYKTAEHLSNAGIPTTVIVDAAMGYYMERADMVIVGAEGVVENGGIVNKIGTFSCAMIAKTMNTPFYVAAESYKFARLYPLNQSDFPHNPTEEPMLPSCNCDPELVLPRHPLLTVGSPSCDYTPPQYISLLFTDLGVLTPSAVSDELIKLY 329
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: A0A485LJE4_9STRA (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJE4_9STRA)

HSP 1 Score: 274 bits (700), Expect = 1.900e-80
Identity = 147/254 (57.87%), Postives = 183/254 (72.05%), Query Frame = 2 
Query: 1574 STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSV-------ATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            S+IS+T+GCQLFLR+V+R   E    E FD+ CK QL+ RG+ FAE S  SR++IA LGH FVRDG  VLTHG SR    LLL AA+TKHFSV+V EGRP+G+G+K A +L+ AG+P TV++D+A+GY+ME  D+ V GAEGV+ENGGIVNK+GTF  A++A     PFYVAAESYKFARL+PL+Q D P  +       +    P+ V          SP+ DYT   YI+LLFTDLGVLTPSAVSDELI+LY
Sbjct:   85 SSISVTAGCQLFLRYVTRCFLEF---EDFDQ-CKSQLIQRGKLFAETSSMSRKRIADLGHNFVRDGMQVLTHGASRVVTKLLLQAAQTKHFSVVVTEGRPNGSGYKTAELLSNAGIPTTVIVDAAMGYYMEKVDMVVVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHNRTEETMLPSCGCDPELVLPTHPLLTVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLY 334
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: T0R713_SAPDV (eIF-2B GDP-GTP exchange factor subunit alpha n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R713_SAPDV)

HSP 1 Score: 272 bits (696), Expect = 4.000e-80
Identity = 147/253 (58.10%), Postives = 184/253 (72.73%), Query Frame = 2 
Query: 1574 STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGK------IPRAPFAAPSGTPDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            S+IS+T+ CQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S  SR++IA LGH FVRDG  VLTHG SR    LLL AA+TKHFSVLV EGRP+GAG+K A VL+KAG+P TV++D+A+GY+ME  D+ + GAEGV+ENGGIVNK+GTF  A++A     PFYVAAESYKFARL+PL+Q D P  +      +P       +    ++   SP+ DYT   YI+LLFTDLGVLTPSAVSDELI+LY
Sbjct:   68 SSISVTAVCQLFLRYVTRCFLEF---DDFDQ-CKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAKTKHFSVLVTEGRPNGAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHSRKDDMSNLPACACRPKTTAQANLTVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLY 316
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: A0A1V9YVZ8_9STRA (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVZ8_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.240e-79
Identity = 146/247 (59.11%), Postives = 180/247 (72.87%), Query Frame = 2 
Query: 1574 STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            S+IS+T+ CQLFLR+V+R   E      FD+ CK QL+ RG+ F   S TSR++IA LGH FVRDG  VLTHG SR    LLL AA+TKHFSV+V EGRP+ AG+K A VL+KAG+P TV++D+A+GY+ME  D+ + GAEGV+ENGGIVNK+GTF  A++A     PFYVAAES+KFARL+PL+Q D P           PS T  ++   SPT DYT   YI+LLFTDLGVLTPSAVSDELI+LY
Sbjct:   69 SSISVTAVCQLFLRYVTRCFLEFAD---FDQ-CKAQLIDRGKMFVATSLTSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAKTKHFSVVVTEGRPNNAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESFKFARLYPLNQSDFPHNCTDEN---VPSETHPNMTVGSPTCDYTPPHYISLLFTDLGVLTPSAVSDELIKLY 308
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: W4GIQ1_9STRA (eIF-2B GDP-GTP exchange factor subunit alpha n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GIQ1_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.910e-78
Identity = 146/259 (56.37%), Postives = 184/259 (71.04%), Query Frame = 2 
Query: 1574 STISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPR---APFAAPSGTPDS---------VATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            S+IS+T+GCQLFLR+V+R   E    + FD+ CK QL+ RG+ FAE S TSR++I   GH FVRDG VVLTHG SR    +LL AA++KHFSV+V EGRP+GAG+K A +L+ AG+P TV++D+A+GY+ME   + + GAEGV+ENGGIVNK+GTF  A++A     PFYVAAESYKFARL+PL+Q D P  +          APS T D          +   SP  DYT  +YI+LLFTDLGVLTPSAVSDELI+LY
Sbjct:   83 SSISVTAGCQLFLRYVTRCFLEF---DDFDQ-CKSQLIDRGKLFAETSSTSRKRIVDFGHNFVRDGMVVLTHGASRVVTKVLLQAAKSKHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMERVSMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQHDFPHSRRTDESVVSMLAPSCTCDPELVLPSHPLLTAGSPACDYTPPQYISLLFTDLGVLTPSAVSDELIKLY 337
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: F0XX64_AURAN (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX64_AURAN)

HSP 1 Score: 265 bits (676), Expect = 7.020e-78
Identity = 146/248 (58.87%), Postives = 170/248 (68.55%), Query Frame = 2 
Query: 1571 RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            R+ IS++SG +LFLRHV+R   E    E FDE CK+ L  RG  FA  SE SR +IA LGH FVRDG  VL HG SR A  LL  AAETKHFSV V EGR DGAG   A+ LA  GVP T++LD+AV Y+ME  D+ + GAEGV+ENGG++NKVGT  +A  AK    P YVAAESYKFARL+PL+QRDLPE          P      V   SP  DYT  ++ITLLFTDLG+LTP+AVSDELIRLY
Sbjct:   29 RTVISVSSGSELFLRHVTRTFLEF---EDFDE-CKRMLGARGSSFARQSEASRARIAELGHAFVRDGAAVLVHGRSRVATALLAKAAETKHFSVFVTEGRLDGAGVDYASDLAALGVPTTMILDTAVAYYMENVDVVLVGAEGVMENGGVINKVGTLTVATCAKAMRKPVYVAAESYKFARLYPLNQRDLPESHAHTVALPLPESAHADVVAKSPACDYTPPQFITLLFTDLGILTPAAVSDELIRLY 272
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: A0A7S2EC59_TRICV (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EC59_TRICV)

HSP 1 Score: 265 bits (677), Expect = 2.410e-76
Identity = 154/281 (54.80%), Postives = 188/281 (66.90%), Query Frame = 2 
Query: 1571 RSTISLTSGCQLFLRHVSRFVAESVGEEGFDESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLP----------------EGKIPRAP-------FAAPSGT----------PDSVATFSPTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            RSTI+L SGC+LF+++V+R   E+        +C   ++ RGERFA++S  +R++IA +G  FVRDG+VVLTHG+SR    +LL AAET+HFSV+V EGRPD AG KAA V A AG+P TVVLDSA+GY ME AD+ V GAEGV+ENGG+VNK+GT+ + V A+    PFYVAAESYKFARLFPL+QRDLP                E     AP        AA + T          P  V   +P  DYT A+YITLLFTDLGVLTPSAVSDELIRLY
Sbjct:  120 RSTIALASGCELFMKYVTRCFLEAPDFA----TCMANVVERGERFADISLAARDRIADVGRSFVRDGSVVLTHGWSRVVASILLKAAETRHFSVIVLEGRPDAAGAKAAKVYADAGIPTTVVLDSAMGYVMERADMVVVGAEGVVENGGVVNKMGTYALGVCARESGKPFYVAAESYKFARLFPLNQRDLPTMGPNAELTFVDTASWEATGGMAPTKGGDSGIAAAATTDEIPGVVRLRPGRVEVENPPCDYTPAKYITLLFTDLGVLTPSAVSDELIRLY 396
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BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Match: K3WD48_GLOUD (eIF-2B GDP-GTP exchange factor subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD48_GLOUD)

HSP 1 Score: 261 bits (666), Expect = 8.450e-76
Identity = 145/272 (53.31%), Postives = 192/272 (70.59%), Query Frame = 2 
Query: 1514 AANQPDRVLTEAAVA*RFCRSTISLTSGCQLFLRHVSRFVAESVGEEGFD--ESCKQQLLHRGERFAEVSETSREQIARLGHIFVRDGTVVLTHGYSRCALHLLLMAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVADLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFPLDQRDLPEGKIPRAPFAAPSGTPDSVATFS---PTVDYTSAEYITLLFTDLGVLTPSAVSDELIRLY 2314
            AA+Q     T+ + + R+ +++I+ T+GCQLFLR+V+R   E      FD  E CK QL+ RG  FAE S +SR++IA +GH F+RDG  VLTHG SR  + LL  AA+TKHFSV + EGR +G+G + A  LA+ G+P TV+LDSAVG++ME  D+ + GAEGV+ENGGIVN VGT+ MAV+A+    PFYVAAESYKFARL+PL QRD+P+ ++  +     +    ++A  S   P  DYT   YI+L+FTDLGVLTPSAVSDELI+LY
Sbjct:   55 AAHQLKTYQTDDSSSSRY-QNSIATTAGCQLFLRYVTRCFLE------FDDFELCKSQLIDRGNFFAETSLSSRKRIAEVGHNFIRDGMRVLTHGASRVVIALLCEAAKTKHFSVFITEGRSNGSGLQTAEKLAETGIPTTVILDSAVGFYMEQTDMVIVGAEGVVENGGIVNSVGTYSMAVIAQALKKPFYVAAESYKFARLYPLTQRDVPQTQMELSVSGTLAKNEAALANISLKNPFFDYTPPGYISLMFTDLGVLTPSAVSDELIKLY 319
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNE0_ECTSI6.250e-14892.06eIF-2B GDP-GTP exchange factor subunit alpha n=2 T... [more]
A0A835YUA3_9STRA1.070e-9766.80eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
A0A6G0WSA6_9STRA5.830e-8459.84eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
A0A485LJE4_9STRA1.900e-8057.87eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
T0R713_SAPDV4.000e-8058.10eIF-2B GDP-GTP exchange factor subunit alpha n=2 T... [more]
A0A1V9YVZ8_9STRA2.240e-7959.11eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
W4GIQ1_9STRA2.910e-7856.37eIF-2B GDP-GTP exchange factor subunit alpha n=4 T... [more]
F0XX64_AURAN7.020e-7858.87eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
A0A7S2EC59_TRICV2.410e-7654.80eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]
K3WD48_GLOUD8.450e-7653.31eIF-2B GDP-GTP exchange factor subunit alpha n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5064579..5069570 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.0
Seed ortholog evalue5.8e-75
Seed eggNOG ortholog2880.D8LNE0
Preferred nameEIF2B1
KEGG koko:K03239
KEGG Pathwayko03013,map03013
GOsGO:0000166,GO:0001882,GO:0001883,GO:0002181,GO:0002183,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005085,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005850,GO:0005851,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0007417,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009605,GO:0009628,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009987,GO:0009991,GO:0010001,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0010647,GO:0014003,GO:0016020,GO:0017076,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019899,GO:0021782,GO:0022008,GO:0023052,GO:0030154,GO:0030234,GO:0031323,GO:0031326,GO:0031667,GO:0032045,GO:0032091,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0034248,GO:0034284,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042063,GO:0042221,GO:0042594,GO:0042802,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043393,GO:0043434,GO:0043603,GO:0043604,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050851,GO:0050852,GO:0050896,GO:0051020,GO:0051098,GO:0051099,GO:0051100,GO:0051171,GO:0051246,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1903832,GO:1903833,GO:1904424,GO:1905097,GO:1905098,GO:1990928,GO:2000112
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1184@1,KOG1466@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioneukaryotic translation initiation factor 2B alpha subunit
Ec32 orthologEc-04_004190.2
Exons5
Model size2893
Cds size504
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815337.2014499-UTR-P-fluviatile_contig1:5064578..50651451622815337.2014499-UTR-P-fluviatile_contig1:5064578..5065145Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5064579..5065145 -
1693561549.526807-UTR-P-fluviatile_contig1:5064578..50651451693561549.526807-UTR-P-fluviatile_contig1:5064578..5065145Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5064579..5065145 -
1622815337.2616587-UTR-P-fluviatile_contig1:5067486..50676161622815337.2616587-UTR-P-fluviatile_contig1:5067486..5067616Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5067487..5067616 -
1693561549.5981112-UTR-P-fluviatile_contig1:5067486..50676161693561549.5981112-UTR-P-fluviatile_contig1:5067486..5067616Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5067487..5067616 -
1622815337.270236-UTR-P-fluviatile_contig1:5067878..50695701622815337.270236-UTR-P-fluviatile_contig1:5067878..5069570Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5067879..5069570 -
1693561549.6096954-UTR-P-fluviatile_contig1:5067878..50695701693561549.6096954-UTR-P-fluviatile_contig1:5067878..5069570Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5067879..5069570 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815337.2179244-CDS-P-fluviatile_contig1:5065145..50652601622815337.2179244-CDS-P-fluviatile_contig1:5065145..5065260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5065146..5065260 -
1693561549.5441217-CDS-P-fluviatile_contig1:5065145..50652601693561549.5441217-CDS-P-fluviatile_contig1:5065145..5065260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5065146..5065260 -
1622815337.2281094-CDS-P-fluviatile_contig1:5065959..50661411622815337.2281094-CDS-P-fluviatile_contig1:5065959..5066141Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5065960..5066141 -
1693561549.5614574-CDS-P-fluviatile_contig1:5065959..50661411693561549.5614574-CDS-P-fluviatile_contig1:5065959..5066141Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5065960..5066141 -
1622815337.2366765-CDS-P-fluviatile_contig1:5066968..50671571622815337.2366765-CDS-P-fluviatile_contig1:5066968..5067157Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5066969..5067157 -
1693561549.571257-CDS-P-fluviatile_contig1:5066968..50671571693561549.571257-CDS-P-fluviatile_contig1:5066968..5067157Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5066969..5067157 -
1622815337.2482872-CDS-P-fluviatile_contig1:5067468..50674861622815337.2482872-CDS-P-fluviatile_contig1:5067468..5067486Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5067469..5067486 -
1693561549.5802362-CDS-P-fluviatile_contig1:5067468..50674861693561549.5802362-CDS-P-fluviatile_contig1:5067468..5067486Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5067469..5067486 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.451.1prot_P-fluviatile_contig1.451.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5065146..5067486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.451.1

>prot_P-fluviatile_contig1.451.1 ID=prot_P-fluviatile_contig1.451.1|Name=mRNA_P-fluviatile_contig1.451.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=168bp
MAAETKHFSVLVAEGRPDGAGFKAAAVLAKAGVPVTVVLDSAVGYHMEVA
DLCVTGAEGVLENGGIVNKVGTFQMAVLAKTFNVPFYVAAESYKFARLFP
LDQRDLPEGKIPRAPFAAPSGTPDSVATFSPTVDYTSAEYITLLFTDLGV
LTPSAVSDELIRLYGEA*
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mRNA from alignment at P-fluviatile_contig1:5064579..5069570-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.451.1 ID=mRNA_P-fluviatile_contig1.451.1|Name=mRNA_P-fluviatile_contig1.451.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4992bp|location=Sequence derived from alignment at P-fluviatile_contig1:5064579..5069570- (Porterinema fluviatile SAG_2381)
GCACAGGGAAACAGGAAACAGAGAGAGAGAGAGAGAGGCAGACACGAGCG
GAGAGAGAAGACTATGGGGAACGACACATACTGAGTGAGAGCAGAGGGAG
AGAGCGCGGGGGTGCAGGCGCGAATGATTCTCGCGTCTTTCGCGCATCGC
CGTTATGAAGAGCATGACCTGCTGCGCGGTTCTAGAGGTCTGCCGGGTTG
TCTTGGTCTCGTGGGTATCACTGCATGAGGACGCACTTGTTCTCTCCGAT
ATGTCCTCGATCAAACAGCAGAGGCGAAGAATCATTGACTTGTGCTTTCG
ATTTTGAAATACATTGCTGCAATCGTCGTGAAGCTACACATATTGACAAA
CACCCCCCCACACGGTCGCCGAGAACGTGCGGGTATGCCGTGCTTGAGAC
TCATGAATACGTAGAGCAATGGCACCCGGGAAACTTACGAATCGTCGAGT
GGATGGTTGATGTTCCTCGGTAGCTTGAAGGTTACAAGGGCCAATAATCA
CACACTGGTGCTGGCAGCAGCCATATTGTCCGCGGCAACCCACACGGACA
TCCAGCCATCAGATCGGGACGCTGGTGAACCGGTGAAACGGCTCACCTAC
TGCCACTAGAATCAAGTACTCTTAGCCTGATGCGACTCTATTTCGTTGTG
CGAAGCAACCCGTACCCGTACATCTGTCTGATTGCTTCGAGGGTGGATGA
TCCAAGGTCGCCTGCTTCACCCCTCCCAAAAATAACGAAGGTGGAGTCGA
AAAGTCGCAGTCTTGTCCGCTACCCTCCCATGGCAAGATATCGTAGCCAT
CCCCGTTCTGGTGTTGCATACTCCTCGTACCAGAGGGATACGAATATCCC
CTTGCACGTTGGCGTTCCATGCCCTCCCTCCCGGATCGCGCACAAGGATG
CCGCAGCCCAGACCTTACGCGTCTCTTCAGGGATTCGTGGTCGTAGGGAG
GGTGGTCGAATGACCTCGTAGCACGGTCCAACTGGCAACAGCTGTGTAAA
CCCCCCTTCTCCGCCCGCGCTCCCCCAGATCTTTCATGCTGAGTTGCTTC
TTGTCTTGTCCTTTGTCTGTACATGGCAACTCTAACAATGAGCTCGGCCC
CTGAAGGCTGTCCTTGTTGAGGTCAGAAATGGGCCTCCTACCTGGTGACA
GCAACAGCAATCACCATGAGGAGCATATCCATTTTCCCGTATCCTACCCT
TCCATCCAGCCCTTCTGACAGTAACTGCTCACGGCCCCACCAATTGCGCA
CCTTCAATAGTTGTACCATAAAACGCCAACGAGAGCTGCTCGCAGTCTAC
TGACATCGCGAATGGTAACAATTGTAAGCCGTCAGCATGGTCATGTGACC
GCTGTTTCGAACTCGCTCCTCGCCGAAACGGTGCTGTTTTCTGTTGGGTT
TGCTTGTTTTCTGTTCCCTCACGCCTTCAATACCGGCGATCATTAAGCCT
CGCTCGCGACATTATGGATGCAAGCAAATCCAACCAGCGTTTTTCGACTG
CTACCTCCCGATCGCTGCAAACCAACCCGACCGTGTTCTGACTGAGGCTG
CCGTGGCGTGACGGTTTTGCAGAAGCACGATTTCTCTCACGAGCGGGTGC
CAGCTGTTCCTCCGACACGTGTCCCGCTTCGTGGCGGAGTCGGTCGGGGA
GGAGGGCTTCGACGAGTCCTGCAAGCAGCAGCTACTGCACAGGCGAGTGA
GGGAGGGAGTGGGCGAATGATTGGAGGAATGGGCGGTTGAATGAACGAAT
GGAGGAAGCTCAGTCGGTTGCCCGCCCCACCTGTGGAACTTGCGATGTAC
GACGTCCTGACTTTCGTCTGTTCTGCACTCACACTGACTCGATCTTCCGC
TTCATCTCTATCCTTCTCTCTCCCCCCTTCTCTCGCTCCCGCCCCGCCCT
TTTGTGGTCTCCCCCTCGCGCTCCCTATCGTTCCGCGTCCCCCCGCCTGA
AAAGGGGGGAACGATTCGCGGAGGTGTCCGAGACCAGCAGAGAACAGATC
GCGCGGTTGGGGCACATCTTCGTCAGGGACGGCACGGTGGTGCTGACGCA
CGGCTACTCGCGCTGCGCCCTGCACCTCCTGCTCATGGCCGCGGAAACGA
AGGTCGGCGCAGTAGCATGGTTTGGTGTGTCGGACGGTGCTGCATTTTGT
TCGAGTGTATTAATACCCGAAAGCGATGCTGGTTGTGAGACTCCGCATGT
GCTCAAAGAGAAGAGGTAAAGCTTTGTTTTTCGCATGCGCATAAACAAAC
GAATGGTCGCGTGGCTCAAGCGCTGAGCAATGTGAAGAAAAAAAACTCTC
GGCCATCGAATCTCCGCTCTCTCCCTCCCCCCCGTCGCCTCCTCCCCGCC
CGTCTCCCATCCGCTGTTTGTCCGATGCACATAACCCTCACCTCATCAAC
TTCCGTACCACAGCACTTTAGCGTGCTGGTCGCGGAGGGAAGGCCGGACG
GGGCAGGCTTCAAAGCCGCCGCTGTGCTGGCCAAGGCCGGGGTCCCCGTG
ACTGTTGTGCTGGACTCCGCAGTCGGGTACCACATGGAAGTGGCGGACCT
ATGCGTAACGGGCGCGGAGGGGGTGCTGGAAAACGGGGGCATCGTGAACA
AGGTATGCGAGGGCGTCTCGGTTGGCCTTAACAGCGCGGCCATCGGTTGA
TCGACGAAGCTTGTCAGCGTCGCGGGGCATGGTTGCCATGCTTGTTAGTT
TTGTTTGAAGCGCCTTCTTTTCATTGGCGAAATGCTAGTTAGCTTCTCAT
ATTCCGGTCATTCTTTTTTTGACCTTCGTGCCCGAGATCGGTGGTACGCG
TGATGTTTGGTAGATCACAAAAGCAGATAATTCGCATAAATGTCTTCTGG
TGGTGTCGCATTGTCCGTGAGACAGCGGTGGAAGGAACGCCAGGGTAAGT
AGGGACCCGTTGCGATCGAAGGCCAACCGTCATTCGTCGTGAAGGGAATC
TGGGCCGGCGCCGTGTTTTTTTTTGGAACTTCGGGGTCATGCTTGACAGG
TTTGCATTTCAAATATAATGAAACGCACCAACAGTTCCGCGAACCCATCG
AATGCGCAAGCGCATTGAAACCGTTCAATTGCACGCCAGTGCGGACCCGC
CACACGTCCGTGACAAAAGGCCGCACGGCAATGTATGGACACATGGGGTA
CTGGCCCCCTAGGGGGTGGGTTCCGGGAGGAGGGAGATGCGCGCGCTCGG
ACGAAGTAGGTGGGGACACGCCAAGACCTTTGAGGCAACCTTGTAGCAGG
CGGGCGCGGAAGTGCCAAACAAATAAACACCTGGTCTTAACTAAAACGTC
ACGCGATTCCACTCTTGCAGAGCTTCTTCATGTCGTCCCTGCGCGAACCT
CCTCAACACGACGACACCCCGCCCAAACGCACCACATCATAGCACGCACC
GTTTCGAACCCTCCCCCCCCCTCTGCTAGGTTGGGACGTTCCAGATGGCG
GTGCTGGCAAAGACGTTCAACGTCCCCTTCTACGTGGCGGCGGAGAGCTA
CAAGTTCGCCCGTTTGTTCCCCCTTGACCAGCGAGACCTGCCCGAGGGCA
AGATCCCGAGAGCTCCGTTCGCCGCGCCGTCGGGCACTCCGGACAGCGTC
GCCACCTTTAGGTGATGAATAATCATGAGATGTTGGCAACAACGGGATTG
GATGTTTGCGCCGCTACCTGCGGCGGGGGTTGAACATGAGCATTTAGAGC
GAAAAGGGGTTGCGATTTTGCATCGCCAACTAAAGTTTGGAATGTGTGAG
CAGTCAGAGCGAACACGATGTGTGCGCAAAATATGCCAGTTTAAGGTATG
GACCACGCCGACAAATTGGGAGCACCTCTCGTGACTCAAATGTGGAGAAA
AACATGGGTCGGTTGTCTGAGTCTTTGTGTGAGTGTGTGGGAGAAGGAGA
CTTCTTGCTAGGAGGCGGTAGGCATCGTCGCCGTTGCTCACAATCACACG
TTGATGGGGAGAAAAGGAAACGGTGCAAATTTGTTCGTGCGGAGGCTTCG
TGCCTGTCGCTCGCTTGATGGGATGAACCCCCCAGGGCGGACAAGACACC
GCGTTTTGTCGCGAACTCGAAAGCGGCTAACTGCCGTGCAGACAATAAGG
TTATGTGCGACAACAGCGTCGACCCGGGGAGCGAGATGGGACAGAGAAAG
GGGGGAGCACCATCCCTCCTAATCTGGCCCCTCGCTTTTCCCCCCGCGCA
GTCGCTACTAGCGTATGTCCGCGTCCTCCGATTTATCTTCGTTTATCAAA
TTCATCCCTAATCATTGCCCTCACCATCACCGCTCGCTGACGACGGACGA
CAAAATGCAGCCCAACGGTGGACTACACCTCGGCTGAGTACATCACGCTC
CTCTTCACCGACCTCGGGGTCTTGACGCCATCCGCAGTGTCCGACGAGCT
CATCCGCTTGTATGGCGAAGCGTGAGGGGTTTCGCGATAGAGGGATATTG
TTGAGCTGCCGATAGGGATTGCGGAATAGAGTTGTCGATGCCGAGGATTT
CAGGCGGGAGGGTAGGGCGGATTTAATGGCGTGTGGATTAAGTATGATGG
TCGACTTCGGAGGGAGGGAGCAGCATGTCAAATGTTCGTGTTTCGTTTGT
GTGACGGCATCCAACTGTGTTTTTCGATTACGTCGCTGCGAAATGCGGCC
CTTCCTACGCAGTCGGATGAGCGAGGCCCACGTCGAGTCAGTGATGGCTG
TGCTCGTGGGCCAGGCCCACCCATTTAGCGGGGGCGTTCTCTTCAATTTT
CCAGCGCACTGCTTTTGTGTCTAGCGCAGAGAAGGCGACAGAGTGGGAGT
TCCTACGTGAAAAGCTCCGGGTATGACTTTCCCTGCCGTGCGGCTTCTGT
GTGCTGTTGCCGCCGCATTGGCTGTTGGTCTTTCTCCAGACCTGACTCGC
ATAGAAAAAAGGCCACGTCAGTCAAAGTTAGTACGCGTTTGAGTGTGTGT
CTAACGCAGCGGTTCAAGCGGCGCGAAGACAGCAGAGAGCGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5064579..5069570-

>mRNA_P-fluviatile_contig1.451.1 ID=mRNA_P-fluviatile_contig1.451.1|Name=mRNA_P-fluviatile_contig1.451.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1008bp|location=Sequence derived from alignment at P-fluviatile_contig1:5064579..5069570- (Porterinema fluviatile SAG_2381)
ATGGCCGCGGAAACGAAGATGGCCGCGGAAACGAAGCACTTTAGCGTGCT
GGTCGCGGAGGGAAGGCCGGACGGGGCAGGCTTCAAAGCCGCCGCTGTGC
TGGCCAAGGCCGGGGTCCCCGTGACTGTTGTGCTGGACTCCGCAGTCGGG
TACCACATGGAAGTGGCGGACCTATGCGTAACGGGCGCGGAGGGGGTGCT
GGAAAACGGGGGCATCGTGAACAAGCACTTTAGCGTGCTGGTCGCGGAGG
GAAGGCCGGACGGGGCAGGCTTCAAAGCCGCCGCTGTGCTGGCCAAGGCC
GGGGTCCCCGTGACTGTTGTGCTGGACTCCGCAGTCGGGTACCACATGGA
AGTGGCGGACCTATGCGTAACGGGCGCGGAGGGGGTGCTGGAAAACGGGG
GCATCGTGAACAAGGTTGGGACGTTCCAGATGGCGGTGCTGGCAAAGACG
TTCAACGTCCCCTTCTACGTGGCGGCGGAGAGCTACAAGTTCGCCCGTTT
GTTCCCCCTTGACCAGCGAGACCTGCCCGAGGGCAAGATCCCGAGAGCTC
CGTTCGCCGCGCCGTCGGGCACTCCGGACAGCGTCGCCACCTTTAGGTTG
GGACGTTCCAGATGGCGGTGCTGGCAAAGACGTTCAACGTCCCCTTCTAC
GTGGCGGCGGAGAGCTACAAGTTCGCCCGTTTGTTCCCCCTTGACCAGCG
AGACCTGCCCGAGGGCAAGATCCCGAGAGCTCCGTTCGCCGCGCCGTCGG
GCACTCCGGACAGCGTCGCCACCTTTAGCCCAACGGTGGACTACACCTCG
GCTGAGTACATCACGCTCCTCTTCACCGACCTCGGGGTCTTGACGCCATC
CGCAGTGTCCGACGAGCTCATCCGCTTGTATGGCGAAGCGTGACCCAACG
GTGGACTACACCTCGGCTGAGTACATCACGCTCCTCTTCACCGACCTCGG
GGTCTTGACGCCATCCGCAGTGTCCGACGAGCTCATCCGCTTGTATGGCG
AAGCGTGA
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