mRNA_P-fluviatile_contig1.40.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.40.1 vs. uniprot
Match: D7FXA4_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA4_ECTSI) HSP 1 Score: 222 bits (565), Expect = 7.510e-63 Identity = 100/132 (75.76%), Postives = 112/132 (84.85%), Query Frame = 1
Query: 2899 STSRGELTTQGRTRKPARRRVTKPVWSQLRKACDRCTSKKIKCDGKEGCFQCSKAGTACHFSICRRSGPRDSNGHKAWVLGPIIPRDGYEKVTGRRGSCRTRSPCPFASADGQSKTEHYHCRYPDCEYASKT 3294
ST+ G + ++ R R+P+R++ KPVWSQLRKACDRCTSKK++CDGKEGCFQCS+ G CHFSICRRSGPRDSNGHK +GPIIPRDGYEKVTGRRGSCR S C F SADGQSKTEHYHCR P CEYASKT
Sbjct: 50 STTVGIIISKSRPRRPSRKKTKKPVWSQLRKACDRCTSKKVRCDGKEGCFQCSRVGATCHFSICRRSGPRDSNGHKTGTIGPIIPRDGYEKVTGRRGSCRISSQCRFVSADGQSKTEHYHCRAPGCEYASKT 181
BLAST of mRNA_P-fluviatile_contig1.40.1 vs. uniprot
Match: D7G066_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G066_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.200e-28 Identity = 68/143 (47.55%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 2884 DISSDSTSRGELTTQGRTRKPARRRVTKPVWSQLRKACDRCTSKKIKCDGK------EGCFQCSKAGTACHFSICRRSGPRDSNGHKAWVLGPIIPRDGYEKVTGRRGSCRTRSPCPFASADGQSKTEHYHCRYPDCEYASKT 3294
D+++ + +RG + T R R++ VWSQ RKACDRCT KK++CDG + C C +AG AC F ICRRSGPRD +GHK G I+ R+ +EKVT R G CRT++ C F + DG EH+HCR DC +A KT
Sbjct: 488 DVAAPARNRG-VATAASGRPSPRKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACIFGICRRSGPRDEHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKT 628
BLAST of mRNA_P-fluviatile_contig1.40.1 vs. uniprot
Match: A0A6H5JPG2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG2_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.120e-28 Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 2971 VWSQLRKACDRCTSKKIKCDGK------EGCFQCSKAGTACHFSICRRSGPRDSNGHKAWVLGPIIPRDGYEKVTGRRGSCRTRSPCPFASADGQSKTEHYHCRYPDCEYASKTM 3297
VWSQ RKACDRCT KK++CDG + C C +AG AC F ICRRSGPRD++GHK G I+ R+ +EKVT R G CRT++ C F + DG EH+HCR DC +A KT+
Sbjct: 765 VWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACLFGICRRSGPRDAHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKTL 878
BLAST of mRNA_P-fluviatile_contig1.40.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC) HSP 1 Score: 60.1 bits (144), Expect = 2.360e-5 Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 2980 QLRKACDRCTSKKIKCDGKEGCFQCSKAGTACHFSICRRSGPR 3108
+LR++CDRCTSKKI+CDG C C + G ACH+S RR+GP+
Sbjct: 11 KLRRSCDRCTSKKIRCDGLAACQNCVRRGYACHYSERRRTGPK 53 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.40.1 >prot_P-fluviatile_contig1.40.1 ID=prot_P-fluviatile_contig1.40.1|Name=mRNA_P-fluviatile_contig1.40.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1112bp MDGAHGSNTRPFLIAVPSRRSPGIFPAPLEGASAALRQKNDGEGDSSSNQback to top mRNA from alignment at P-fluviatile_contig1:686964..694845+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.40.1 ID=mRNA_P-fluviatile_contig1.40.1|Name=mRNA_P-fluviatile_contig1.40.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7882bp|location=Sequence derived from alignment at P-fluviatile_contig1:686964..694845+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:686964..694845+ >mRNA_P-fluviatile_contig1.40.1 ID=mRNA_P-fluviatile_contig1.40.1|Name=mRNA_P-fluviatile_contig1.40.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6672bp|location=Sequence derived from alignment at P-fluviatile_contig1:686964..694845+ (Porterinema fluviatile SAG_2381)back to top |