mRNA_P-fluviatile_contig1.395.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE) HSP 1 Score: 1248 bits (3230), Expect = 0.000e+0 Identity = 823/1216 (67.68%), Postives = 892/1216 (73.36%), Query Frame = 2
Query: 5 MGGMGEWGPSPGVPKALDWTLSRRTRECLETAEQARVLHDALRILGRREGGWLPSPSGSWSPGEWVAVLTALVSMVVETHTLNQFFSDAEQRCENLRKKAVSGAKMSARSFQ--GMLLSVGGNPAVEFWQRLLEEIDGEMD-IKSYAEEDDDEEDEDFGKTPGVCIVCWCPTANIDASQILMCDGCQGEVHLQKLCSGLRRKPAEDTPFYCSGCTARRDRQARAAXXXXXXXXXXXXXXXXXXXGDGTENGLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRMEFYEDAXXXXXXXXRESALKMSVVERILDAKVRAERERKQIKDEAAPPAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------------------DSRKNNGPNKLKQPCVKRRCRSLPGDAIDWADALLPDWREGGNGGHSSPSLPVPELECEYCFKREKELCSPMVVDLSPEEAEAYLKQQEAEHSGNGGGS---DGGHRKVRFPRFRRARHGEGGDGTG----SPKASGPTVHETCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPRDSRRVFVSQPVREGESDG----------GCGGGGETPDGGTTAEPPRPPQTLAVVPPRSPAPLEQDMMVYENDGDLEPLMAWLNESGQREGPLRAALLRAFPPP--------AAVKDEEEADGDTIKSESATA----------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGPRRGA-RRVNDA-KDRGVLARPSRNQELPRMLAEGSVELRVAVNPPGASNNVIVPATEAVVDFDNDGEFAEDDPSN--GGAVTWSKKYYAVRLHDATNGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQPGGDAAPVEKKKGFNIKPLEFHVKVSPRFTFTGAVAALHKLRAVQFLKHRHREESGAVAVDLDLSFDCHEVECLKMGIFTVLSALPKGALKAGEGGGMSATEPPLDSDISDDTFEQQGAGLD-----AAASGWTPALRECWIPHVASATRCQDLMEALLLLESCIDPKWLKHWYRPTQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVATTAQRGSRLRSGIQLRERSGAAATRG 3454
+GGMGEWGPS GVPKALDW+LSRR RECLE+ + ARVLHDALRIL RREGGWLPSP+G WSPGEWVAVL ALV+M VETHTLN FFSDAEQRCENLRKK VSG KMS RSFQ GMLLSVGGN AVEFWQRL++ +DGEMD +K+ A+E+D DFGKTPGVCIVCWCPTA+IDASQILMCDGCQGEVHL+K CSG RRKP++DTPF+C GCT RRDRQAR XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++++ A RE +A + R ++ D GXXXXXXXXXXXXXXXXXXXXXXXXXX R DS+KNNGPNKLKQPC+KRRCR+LPGDAIDWADALLPD R G GG ELECEYCFK EKELCSPMVVDLSPEEAE +LK QEAE +G+G G HRKVRFPRF RAR GEG SP+ASGP VHE CAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFP DSRRVFVSQPVREG+ DG GGGG+ G A +P V P PAP E+D MVYENDGD++ L+AWLNESGQREGPLRAALLRAFPP AA+ E+ GD +K +A XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGG RR + RR DA DRGVLARPSRNQELPR+LAEG VELRVAVNPPGASNNV+VP TE VV+FDNDGE EDD N GG+V+WSKKYYAVRLHDA+ GEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTG FRLVFHVVPAQFYAAP QPG + A +KKGF IKPLEFHV+VSPRFT+TGAVAALHKLRAV +LK RHREES AV VDLDL FDC E+ECLKMG+FT+L+ALPKGA K EGG L +D + EQQ + SGWTP+LRECW+ VASATR QDLMEALLLLE C+D KWLK WYRP QQKM S HLLRLSTPAAVALRLFALDRAILYDKVAT AQRGSRLR+GIQLR RS A++ G
Sbjct: 1670 VGGMGEWGPSEGVPKALDWSLSRRARECLESEDNARVLHDALRILSRREGGWLPSPTGCWSPGEWVAVLAALVAMAVETHTLNHFFSDAEQRCENLRKKVVSGTKMSTRSFQASGMLLSVGGNGAVEFWQRLMKSVDGEMDAVKNCADEEDXXXXXDFGKTPGVCIVCWCPTAHIDASQILMCDGCQGEVHLKKSCSGFRRKPSDDTPFFCGGCTTRRDRQARVEAAPAPAAEAEGXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKYHGGANLGLEDSRREG-----------EAAGQESRRGRRRWDRGDGEGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGRGEGATPVAGGAGAKRSKRCGICVGCRAKACDRCKYCLDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWADALLPDPRANGGGGGG-------ELECEYCFKMEKELCSPMVVDLSPEEAETFLKHQEAEQNGDGSGGAECSNPHRKVRFPRFSRARPGEGXXXXXXVGKSPRASGPVVHEVCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPGDSRRVFVSQPVREGKGDGLDSVVSEATGADGGGGDAKAAGVAAA--QPSWRKLVPSPGGPAPAEEDFMVYENDGDVDALVAWLNESGQREGPLRAALLRAFPPASPSPPXXEAALALEKADHGDGLKPSAAAMVADGEGXXXXXXXXXXXXXXXGADNVAAATAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRGGARRSSSRRAGDAASDRGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVVVPETEVVVEFDNDGEAVEDDARNEGGGSVSWSKKYYAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQFYAAP---QPGDEGAATAEKKGFKIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDELECLKMGLFTLLNALPKGAFK--EGG--------LTTDEVEGLSEQQXXXRERLPATTTTSGWTPSLRECWVSQVASATRGQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGRSSASSRGG 2846
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI) HSP 1 Score: 1212 bits (3137), Expect = 0.000e+0 Identity = 767/1225 (62.61%), Postives = 834/1225 (68.08%), Query Frame = 2
Query: 5 MGGMGEWGPSPGVPKALDWTLSRRTRECLETAEQARVLHDALRILGRREGGWLPSPSGSWSPGEWVAVLTALVSMVVETHTLNQFFSDAEQRCENLRKKAVSGAKMSARSFQGMLLSVGGNPAVEFWQRLLEEIDGEMD-IKSYAEEDDDEEDEDFGKTPGVCIVCWCPTANIDASQILMCDGCQGEVHLQKLCSGLRRKPAEDTPFYCSGCTARRDRQARAAXXXXXXXXXXXXXXXXXXXGDGTENGLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRMEFYEDAXXXXXXXXRESALKMSVVERILDAKVRAERE-------------------------------------------RKQIKDEAAPPAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDSRKNNGPNKLKQPCVKRRCRSLPGDAIDWADALLPDWREGGNGGHSSPSLPVPELECEYCFKREKELCSPMVVDLSPEEAEAYLKQQEAEHSGNGGGSDGG--HRKVRFPRFRRARHGEGGDGT--GSPKASGPTVHETCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPRDSRRVFVSQPVREGESDG------------GCGGGGETPDGGTTAEPPRPPQTLA--VVP-PRSPAPLEQDMMVYENDGDLEPLMAWLNESGQREGPLRAALLRAFPPP--------AAVKDEEEADGDTIKSESATARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGPRRGARRVNDAKDRGVLARPSRNQELPRMLAEGSVELRVAVNPPGASNNVIVPATEAVVDFDNDGEFAEDDPSNGG--AVTWSKKYYAVRLHDATNGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQPGGDAAPVEKKKGFNIKPLEFHVKVSPRFTFTGAVAALHKLRAVQFLKHRHREESGAVAVDLDLSFDCHEVECLKMGIFTVLSALPKGALKAGEGGGMSATEPPLDSDISDDTFEQQGAGLDAAA--SGWTPALRECWIPHVASATRCQDLMEALLLLESCIDPKWLKHWYRPTQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVATTAQRGSRLRSGIQLRERSGAAATRG 3454
+GGMGEWGPS GVPKALDW+LSRR RECLE+ + ARVLHDALRILGRREGGWLPSP+G WSPGEWVAVL ALV+M VETHTLN FFSDAEQRCENLRKKAVSG KMS RSFQGMLLSVGGN AVEFWQRL++ +DGEMD +K+ A+ED DFGKTPGVCIVCWCPTA+IDASQILMCDGCQGEVHL+K CSG RRKP++DTPF+C GCTARRDRQAR XXXXXXXXXXXXXXXXXG G++ XXXXXXXXXXXX +MEF E+ +E+ALK + K +RE + + + P XXXXXX XXXXXXXXXX DS+KNNGPNKLKQPC+KRRCR+LPGDAIDWADALLPD R G GG ELECEYCFK EKELCSPMVVDLSPEEAE +LKQQEAE +G+G G++G HRKVRFPRF RAR GEGG G SP+ASGP VHE CAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFP DSRRVFVS PVREG+ DG G GG + +VP P PAP E+D+MVYENDGD++ L+AWLNESGQREGPLRAALLRAFPP AA E+ DGD +K ++ A XXXXXXXXXXXXXXXXXXXXXX R + A DRGVLARPSRNQELPR+LAEG VELRVAVNPPGASNNV+VP TE VV+FDNDGE E+D NGG +V+WSKKY+AVRLHDA+ GEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTG FRLVFHVVPAQFYAAP P G AA EKKKGFNIKPLEFHV+VSPRFT+TGAVAALHKLRAV +LK RHREES AV VDLDL FDC E GL AA SGWTP+LRECW+ HVASATR QDLMEALLLLE C+D KWLK WYRP QQKM S HLLRLSTPAAVALRLFALDRAILYDKVAT AQRGSRLR+GIQLR RS A++ G
Sbjct: 1276 VGGMGEWGPSEGVPKALDWSLSRRARECLESEDNARVLHDALRILGRREGGWLPSPTGCWSPGEWVAVLAALVAMAVETHTLNHFFSDAEQRCENLRKKAVSGTKMSTRSFQGMLLSVGGNGAVEFWQRLMKSVDGEMDAVKNCADEDXXXXXXDFGKTPGVCIVCWCPTAHIDASQILMCDGCQGEVHLKKSCSGFRRKPSDDTPFFCGGCTARRDRQARVEAAXXXXXXXXXXXXXXXXXGKEEAAGVK---------DEVKEGVGDKAPAAXXXXXXXXXXXXAKKMEFCEEPEDEQRRKKKEAALKGGA--NLGLQKFGPKREGPGPGNPPGRTQWEPHRGEGGGGRPRYPGGWDQTQQAGWELPGKPPPRHQPKEPPGGNPSGPPTAGRGEVAAPAXXXXXXKRSKRCGICVXXXXXXXXXXKYCLDSKKNNGPNKLKQPCIKRRCRNLPGDAIDWADALLPDPRANGGGGGG-------ELECEYCFKMEKELCSPMVVDLSPEEAETFLKQQEAEQNGDGSGAEGANPHRKVRFPRFSRARPGEGGGGGVGRSPRASGPVVHEVCAQSMFKARAERAQHKLRGLREQAVEEAIRLGGYQTLPLGRDRHGRFYYRFPGDSRRVFVSHPVREGKGDGLDIVVSEATGADGAGGDAKAAXXXXXXXXXXXXXXXXRKLVPSPGGPAPAEEDLMVYENDGDVDALVAWLNESGQREGPLRAALLRAFPPAXXXXXXXXAAAALEKTDDGDGLKPLASAAMVADGEGDGXXXXXXXXXXXXXXXXXXXXXX---------------------------------RAGDAASDRGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVLVPETEVVVEFDNDGEAVEEDARNGGGGSVSWSKKYHAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQFYAAPQPGDEG--AATAEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDE-------------------------------------------------GLPAATTTSGWTPSLRECWVSHVASATRSQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGRSSASSRGG 2398
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Match: A0A7S0SWC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWC1_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.500e-21 Identity = 94/335 (28.06%), Postives = 165/335 (49.25%), Query Frame = 2
Query: 2396 NNVIVPATEAVVDFDNDGEFA--EDDPSNGGAVTWSKKYYAVRLHDATNGEVLVPSQRQGISVVYEIWRG--QQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQPGGDAAPVEKKKGFNIKPLEFHVKVSPRFTFTGAVAALHKLRAVQFLKHRHRE---ESGAVAVDLDLSFDCHEVECLKMGIFTVLSALPKGALKAGEGGGMSATEPPLDSDISDDTF--EQQGAGLDAAASGWTPALRECWIPHVASATRCQDLMEALLLLESCIDPKWLKHWYRPTQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKV 3373
NN ++ E V D ND E +DD S+ ++SKKY+A+ L + + V +P + I+V Y+I R + ++P P+ N +Y+F++ F ++G + + F + +F NIKPL F+V+V + G++ A+++L A+++ + +R+ + LD + E + L++ I T+ +ALP G+L P +D + S ++ E A L A ++ W+ L + W + S T LME LLLLES I +WL +P + ++ + +++ALRLF LD+AILY+K+
Sbjct: 91 NNYVI-EEEDVFDDTNDNENVTEDDDISHVEYFSYSKKYFAIALVNKSEKRVKLP--KGTITVTYQIHRQGIASPLAYSPLSEPWSDN-IYYFSSINFKKSGKYTISFLI---EFK---------NQNNQTSSVNVANIKPLVFNVQVEAKNVLCGSIHAIYQLNALKYYNYANRQINMNRNDLKTLLDDITNESEFKALQISILTLYAALPLGSL------------PTVDDENSKNSSLDEVNIANLIAESNNWSDILDQTWRGLIHSTTSLTILMECLLLLESFISKQWLHASNVKLLNALPLPHYAMKSISLSSIALRLFCLDKAILYEKL 397
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Match: A0A4D9D954_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D954_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.190e-20 Identity = 103/333 (30.93%), Postives = 152/333 (45.65%), Query Frame = 2
Query: 2411 PATEAVVDFDNDGEFAEDDPSNGGAVTWSKKYYAVRLHDATNGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQPGGDAAPVEKKKGFNIKPLEFHVKVSPRFTFTGAVAALHKLRAVQFLK-HRHREESGAVAVDLDLSFDCHEVECLKMGIFTVLSALPKGALK----------AGEGGGMSATEPPLDSDISDDTFEQQGAGLDAAASGWTPALRECWIPHVASATRCQDLMEALLLLESCIDPKWLKHWYRPTQQKMPSTS-HLLRL-STPAAVALRLFALDRAILYDK 3370
P V+D + D + D AV ++KY+AV L DA + + + + V ++I++G + VE + K+ +++F +F G + L + V D E IKPL V+V R T + L+ + FL R S +V+LD+ D EV L++ + + LP GAL A GGG S D ++ + A WT AL+ WI H+ A ++ME LLLLESC+ P+WLK W+ P ++ +TS HLLRL +T AA A LF LD+AILYDK
Sbjct: 1660 PVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVW----EGRNLGVRFQIFKGGEEVEESSTPRAH-KDHIFWFNVYEFLLPGLYTLRYTV----------------DTLSRE------IKPLCLRVEVRARRAATSVRSVLNS--HLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEV---------GPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDK 1954
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Match: A0A7R9U4T2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4T2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 5.850e-12 Identity = 71/258 (27.52%), Postives = 110/258 (42.64%), Query Frame = 2
Query: 2639 DKNGVYFFTAPKFHRTGTFRLVFHVVPAQFYAAPPPVQPGGDAAPVEKKKGFNIKPLEFHVKVSPRFTFTGAVAALHKLRAVQFLKHR----HREESGAVAVDLDLSFDCHEVECLKMGIFTVLSALPKGALKAGEGGGMSATEPPLDSDISDDTFEQQGAGLDAAASGWTPALRECWIPHVASATRCQDLMEALLLLESCIDPKWLKHWYRPTQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVATTAQRGSR 3400
D G + F +G +R +F A F A P+ +K + ++ S R G++A LRA++ + +R GA L +VE LK GI TV +ALP+G+ LD G+ ++RE W HV S+ Q+L EA+++LES + W+ + + S ++ LR++TP AVALRLFALD+ + YDK+ +R R
Sbjct: 1552 DARGYFLFNTVHPKMSGKYRYLFR---ATFPAD------ADSTGPIRAEKEYFMR------ATSARSLVGGSLALKSSLRALEVAEQDKYALNRALVGAQRPSLTPGIIQKDVESLKTGILTVAAALPRGS-------------------------------LDEEGHGFVESVREAWESHVLSSETVQELSEAVVILESFLQKAWIG---KGSGTVSSSAAYFLRIATPGAVALRLFALDQLVRYDKLEAGGRRRGR 1760 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.395.1 >prot_P-fluviatile_contig1.395.1 ID=prot_P-fluviatile_contig1.395.1|Name=mRNA_P-fluviatile_contig1.395.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1247bp MGGMGEWGPSPGVPKALDWTLSRRTRECLETAEQARVLHDALRILGRREGback to top mRNA from alignment at P-fluviatile_contig1:4563802..4573182- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.395.1 ID=mRNA_P-fluviatile_contig1.395.1|Name=mRNA_P-fluviatile_contig1.395.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9381bp|location=Sequence derived from alignment at P-fluviatile_contig1:4563802..4573182- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4563802..4573182- >mRNA_P-fluviatile_contig1.395.1 ID=mRNA_P-fluviatile_contig1.395.1|Name=mRNA_P-fluviatile_contig1.395.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7482bp|location=Sequence derived from alignment at P-fluviatile_contig1:4563802..4573182- (Porterinema fluviatile SAG_2381)back to top |