mRNA_P-fluviatile_contig1.394.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI) HSP 1 Score: 220 bits (560), Expect = 4.890e-56 Identity = 153/316 (48.42%), Postives = 173/316 (54.75%), Query Frame = 2
Query: 239 GGASDVPAANSWKCPICTVDNDLMSDKCDVCSQRRPAAALPRGSRKRQRQEHRRAEKMDVGSSGDEEDEFGSDHGSAGGGRDR-----------PYSTGGVRGGAASRQRRGVARVNYAEDSDGDAFGSGXXXXXXASTGAARSRGTKGTAGQQGRXXXXXXSKSTAPVGGKGRAQQAGRNAPLAFSGELRWDARAQEEAEALPDDVRAFRRLVRSAVKLLSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLIRHLCHTDNYG 1153
G D A +W CPICTVDNDL DKC VCSQRRPAAALPRGSR P S+GG RQRRGVARVNYAED+D D+ + XXXXXX K + ++GRNAP+ ELR R E E LP DVR FRR+VRSAVK SKE F+LHFRDAVDL AYPQY ++V EPMDLA+ILFKLRQGEYDS+EGR L RDI LIPENCETFNGK IS+NAHQ+A+ LI L D++G
Sbjct: 2561 GVDDDALAPTTWSCPICTVDNDLADDKCVVCSQRRPAAALPRGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSGGR-----DRQRRGVARVNYAEDNDVDS--------------------------DEXXXXXXXXXXXXXXXAKKSKVVRSGRNAPVPLKDELR---RGVAEEEVLPGDVREFRRVVRSAVKGFSKEAFTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQEGRKLLLRDINLIPENCETFNGKGVQISQNAHQLARDLIDRL---DDHG 2839
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.040e-51 Identity = 146/305 (47.87%), Postives = 165/305 (54.10%), Query Frame = 2
Query: 239 GGASDVPAANSWKCPICTVDNDLMSDKCDVCSQRRPAAALPRGSRKRQRQEHRRAEKMDVGSSGDEEDEFGSDHGSAGGGRDRPYSTGGVRGGAASRQRRGVARVNYAEDSDGDAFGSGXXXXXXASTGAARSRGTKGTAGQQGRXXXXXXSKSTAPVGGKGRAQQAGRNAPLAFSGELRWDARAQEEAEALPDDVRAFRRLVRSAVKLLSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLIRHLCHTDNYG 1153
G D A +W CP CTVDN+L DKC VCS+RRPAAALPRG GRDR QRRGVARVNYAED+D D S XXXXX G K K + + GRNAPL ELR R E L DVR FRR+VRSAVK SKE ++LHFRDAVDL AYPQY ++V EPMDLA+ILFKLRQGEYDS+EGR L RDI LIP+NCETFNGK IS+NAHQ+A+ LI L D++G
Sbjct: 3005 GVDDDALAPTTWSCPTCTVDNELADDKCVVCSKRRPAAALPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GRDR--------------QRRGVARVNYAEDNDVD---SDEXXXXXXXXXXXXXXGAK-----------------------KSKVVRMGRNAPLPLKDELR---RGVAEEVVLLCDVREFRRVVRSAVKRSSKEAYTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQEGRKLLLRDINLIPQNCETFNGKGVQISQNAHQLARDLIGRL---DDHG 3255
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: A0A7J6QV23_PEROL (Histone acetyltransferase kat2b (Fragment) n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QV23_PEROL) HSP 1 Score: 63.9 bits (154), Expect = 1.510e-7 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 2
Query: 869 SKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLI 1123
SK+ F+ FR+ V L P Y EV+A PMDL + K G+Y +RE A DI+L+ +NC TFNG+ + ++ A++V + ++
Sbjct: 124 SKKPFAWPFREPVSLKEAPNYYEVIANPMDLQTMKNKCDSGQYQTREQFIA---DIDLMRDNCITFNGRNSEYTKRANEVHEYVV 205
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: C5KHK5_PERM5 (Histone acetyltransferase n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KHK5_PERM5) HSP 1 Score: 63.9 bits (154), Expect = 3.240e-7 Identity = 31/86 (36.05%), Postives = 53/86 (61.63%), Query Frame = 2
Query: 866 LSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLI 1123
+SK+ F+ FR+ V L P Y E++ +PMDL + K G+Y +RE A D++L+ +NC TFNG+ + +E A++V + ++
Sbjct: 197 VSKKPFAWPFREPVSLREAPNYYEIITKPMDLQTMKNKCDSGQYQTREQFIA---DVDLMRDNCITFNGRNSEYTERANEVHEYVV 279
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: A0A7J6T603_PEROL (Histone acetyltransferase n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6T603_PEROL) HSP 1 Score: 63.5 bits (153), Expect = 7.100e-7 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 2
Query: 851 SAVKLLSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLI 1123
S + +SK+ + FR+ V L P Y EV+A PMDL + K G+Y +RE A DI+L+ ENC TFNG+ + ++ A++V + ++
Sbjct: 270 SIITSVSKKPSAWPFREPVSLKEAPNYYEVIANPMDLQTMKNKCDSGQYQTREQFIA---DIDLMRENCITFNGRNSEYTKRANEVHEYVV 357
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: G4ZZM5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZZM5_PHYSP) HSP 1 Score: 58.9 bits (141), Expect = 4.660e-5 Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 2
Query: 866 LSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLIR 1126
L + +L F V++N P Y E++ PMDL I +L +G YD R L RD+ L+ ENC TFN +A IS A+++ R
Sbjct: 3017 LLRNELALAFSAPVNVNEVPGYAELIKHPMDLGTIKIRLSRGFYDQR--FEMLVRDVNLVWENCFTFNRLDADISAGANRLRSIFNR 3101
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Match: W2PP57_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PP57_PHYPN) HSP 1 Score: 58.5 bits (140), Expect = 6.150e-5 Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 2
Query: 863 LLSKEGFSLHFRDAVDLNAYPQYVEVVAEPMDLAKILFKLRQGEYDSREGRHALQRDIELIPENCETFNGKEALISENAHQVAQTLIR 1126
+L + +L F V++N P Y +++ PMDL I F+L +G YD R L D+ L+ ENC TFN +A IS+ A+++ R
Sbjct: 3326 MLLRNELALAFSAPVNVNEVPGYADLIKNPMDLGTIKFRLSRGFYDQR--FELLVHDVNLVWENCFTFNRLDADISKCANRLRSIFNR 3411 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.394.1 >prot_P-fluviatile_contig1.394.1 ID=prot_P-fluviatile_contig1.394.1|Name=mRNA_P-fluviatile_contig1.394.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=375bp MRSQLNPKRLSREEDAEDDEGDEGDSDDDDDDDDDERVRGNRRAKGGGGGback to top mRNA from alignment at P-fluviatile_contig1:4559980..4563775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.394.1 ID=mRNA_P-fluviatile_contig1.394.1|Name=mRNA_P-fluviatile_contig1.394.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3796bp|location=Sequence derived from alignment at P-fluviatile_contig1:4559980..4563775- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4559980..4563775- >mRNA_P-fluviatile_contig1.394.1 ID=mRNA_P-fluviatile_contig1.394.1|Name=mRNA_P-fluviatile_contig1.394.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2250bp|location=Sequence derived from alignment at P-fluviatile_contig1:4559980..4563775- (Porterinema fluviatile SAG_2381)back to top |