mRNA_P-fluviatile_contig1.392.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: D8LI31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI31_ECTSI) HSP 1 Score: 642 bits (1656), Expect = 2.410e-220 Identity = 457/707 (64.64%), Postives = 487/707 (68.88%), Query Frame = 3
Query: 60 RRRLRCWLVAFGGSLGCWRVFAADPLPQQAAHPFRTLAAWLREASPDMRSAEPRAISRGITVLSNSQGYVKSFDGLAYEIKGKIKEGASTADIDKLREEAALYESASSAKQANKLVKLLVEVERALNSAEAAEIASQSDPARAVRFTKEAGLQLLPKPXXXXXXXXXXXXXXXASATPAYGAEGSSQGIAAAGNAAARTA----FTAKPKPATRSRAKSPGSNSKSGKVGATGEENAAGKRRPFPSSSSXXXAAGSLQNEGVKKKKGKQGAKVKEGGRGESGKPAAAATGKPVEAFVVTVGGCEVRCLLMLDERGDGGGGEEAEGRGRLVVAVGDSLTGEALLRSLIEEPAMVQLASHGLMRETAYVNRAAFQSACDILEWAGPLIKASVGPGGAFEGYRVHCTGHSFGGAVAACLAGLLDGAIDVDAPSAXXXXXXXXXXXXXXXXXXXXXXXXXGLRRMGSKRGAPEKASGRQKPRNGTSARKRGEAFRDRRKRENGXXXXXXXXXXXXXXXXXXXXXXXXXSDDGDRDRERGGAAVRVEGAAPWVAACRGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGEDDARLAVPGKVWFAKPRRLKNGATLSRVMQGNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
RRRLRCWLVAFGG+L CW AADP QQA HPFR LAAWLREASPDMRSAEP+AISRGITVLSNSQ YVKSFDG+AYE+KGKIKE STADI+KL +A LYESASS K+ANKLV+LL+EVERALNSAEAAEIASQSDP+RA ++ K+AGL+ LP PXXXXXXXXXXXXXXX N R + XXX G+P+EAFVV V GCEVRC LMLDERG GEE EGR LVVAVGDSLTGEALL SL EEPA+VQLASHGLMRETAYVNR AFQ ACDILEWAGP IKASV PGGAFEGYRVHC GHSFGGAVAACLAGLLDGAIDV+ PS XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX AVRV+GA PWV R VTCVTLGCPPCLSQNLRLPFVTSFV+GDDMVPRT+HESLRRLKRRLLQVMPKGKGL+SQG+AFSTSLFTDVAGVAMQGVRQATTLGEDDARL VPG+VWFAKPRRLKNGATL RVM+GN+KEDMLWQLHDIMLTKSMLSHH LDKY+++LDRV
Sbjct: 4 RRRLRCWLVAFGGTLACWVALAADPSLQQAEHPFRNLAAWLREASPDMRSAEPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKETGSTADIEKLTGQAELYESASSVKKANKLVRLLIEVERALNSAEAAEIASQSDPSRAAQYMKDAGLRFLPDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NGPTRVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPLEAFVVNVAGCEVRCFLMLDERG----GEEGEGR--LVVAVGDSLTGEALLESLFEEPAVVQLASHGLMRETAYVNRVAFQCACDILEWAGPFIKASVEPGGAFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVE-PSGKGXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRVDGAEPWVGIRRDGVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQVMPKGKGLLSQGVAFSTSLFTDVAGVAMQGVRQATTLGEDDARLTVPGRVWFAKPRRLKNGATLKRVMRGNVKEDMLWQLHDIMLTKSMLSHHRLDKYIKILDRV 656
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A835YUE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE7_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.070e-65 Identity = 174/386 (45.08%), Postives = 217/386 (56.22%), Query Frame = 3
Query: 1014 AEGRGRLVVAVGDSLTGEALLRSLIEEPAMVQLASHGLMRETAYVNRAAFQSACDILEWAGPLIKASV-GPGGAFEGYRVHCTGHSFGGAVAACLAGLLDGAIDVDAPSAXXXXXXXXXXXXXXXXXXXXXXXXXGLRRMGSKRGAPEKASGRQKPRNGTSARKRGEAFRDRRKRENGXXXXXXXXXXXXXXXXXXXXXXXXXSDDGDRDRERGGAAVRVEGAAPWVAACRGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGEDDARLAVPGKVWFAKPRRLKNGATLSRVMQGNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
A+G+ R+V A+ D L G ALLR+L P + LA+ GL+ ET + A + +A +L P + + P GA G V GHSF GAVAA AGLLDGA+ V+ XXXXXXX G R G A + G G+S R +G A E G XXXXXXXX + +V A RGRV CVT GCPPC+S LP VTSFV+GDDMVPR + +SL +LKRRL QV+P+G G Q +A T+LFTDVAGVA QG+RQ + G DD+ L VPG VWF KPRRL+ GAT+++ G L++D+LWQ+HD+MLTKSMLSHH L +YV VLDRV
Sbjct: 183 AQGK-RVVAALADDLGGGALLRALSAAPIALPLAARGLLHETLHTAPAVWAAAHALLAAIAPAVLNFLRSPAGA--GATVLFVGHSFAGAVAAVAAGLLDGALAVEGGGGSXXXXXXXS----------------GRRSEGKVGSAEARCKG------GSSRRAKGVA-------EGGDGGMXXXXXXXX--------------------------------SGGYVGAARGRVKCVTFGCPPCVSGAAALPCVTSFVLGDDMVPRVSAQSLEQLKRRLRQVLPRGSGFFGQSLAMGTTLFTDVAGVAAQGLRQRSAAGGDDSALIVPGTVWFVKPRRLRAGATMTKSRSGALRDDVLWQMHDVMLTKSMLSHHSLARYVAVLDRV 504
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A4D9DDN3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDN3_9STRA) HSP 1 Score: 135 bits (341), Expect = 9.910e-30 Identity = 127/398 (31.91%), Postives = 183/398 (45.98%), Query Frame = 3
Query: 1029 RLVVAVGDSLTGEALLRSLIEEPAMVQLASHGLMRETAYVNRAAFQSACDILEWAGPLIKASVGPGGAFEGYRVHCTGHSFGGAVAACLAGLLDGAIDVDAPSAXXXXXXXXXXXXXXXXXXXXXXXXXGLRRMGSKRGAPEKASGRQKPRNGTSARKRGEAFRDRRKRENGXXXXXXXXXXXXXXXXXXXXXXXXXSDDGDRDRERGGAAVRVEGAAPWVAACRG-------RVTCVTLGCPPCLSQNLR--LPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAF--STSLFTDVAGVAMQGV--RQATTLGEDDAR-----LAVPGKVWFAKPRRLKNGATLSRVMQGNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
RL ++VGDSLT L L P V L GL+R + VN + +A ++E ++ + Y +H G S GG+V A +AG+LDG I V+ RR ++RG +A G + + GE XXXXXXXXXX + W A RG VT PC+S+N+R F TSF++GDDM+PR T S++RL++RLL + +G + G+ F + S V G +Q V Q T E++ L +PG+V++ KPR+L GAT+ VM+GNL+ED+LW++HDI +++SML HH LDKY+ VL R+
Sbjct: 259 RLTLSVGDSLTWAQRLDVLRAPPLTVPLRPRGLLRRSMMVNPRLWAAAATVIERVRAVLTTARET---CPNYALHVVGFSLGGSVGALVAGVLDGTIFVEGAVPAPP-----------------------TRRSHTRRGRAARA--------GVAVPEEGEXXXXXXXXXXXXXXXXXXXXX--------------------------------SSTSSWAHALRGATGLAHDNVTAFVFAPSPCISKNIRGLRRFTTSFILGDDMMPRATALSIKRLEKRLLDYVSEGD---ATGIYFDYARSWMKGVVGATLQQVVTHQVTKKEEEEDEGGVEALILPGRVYYIKPRKLHGGATIKEVMRGNLREDVLWKIHDIFVSQSMLKHHSLDKYITVLARI 587
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S2S0W5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0W5_9STRA) HSP 1 Score: 113 bits (282), Expect = 3.490e-25 Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 3
Query: 1701 RGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGE-DDARLAVPGKVWFAKPRRLKNGATLSRVMQG-NLKED-----MLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
+GR + V LG PPCLS N++ +VTS V GDD+V RTT +S+ RL RR ++ K ++Q A+ TD + M +R E ++A+LA+PG+V+ KPRR + +L +V N K +LWQL+DI+L+ SM +HH L Y++ LDRV
Sbjct: 7 KGRTSAVVLGPPPCLSPNVKASYVTSLVHGDDIVCRTTPQSMDRLYRRTVRAYNKNNNPLTQSFAW----MTDTLSLTMSNIRTYAHGSEGEEAKLALPGQVYIIKPRRYHHACSLHQVGGDINAKHQAWRAALLWQLNDILLSSSMWTHHSLPAYIQALDRV 165
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S1B8E3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8E3_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.450e-23 Identity = 68/165 (41.21%), Postives = 101/165 (61.21%), Query Frame = 3
Query: 1680 APWVAACRGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMA--FSTSLFTDVAGVAMQGVRQATTLGEDDARLAVPGKVWFAKPRRLKNGATLSRVMQGNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
A AA +G++T + LG PP LS + PF++S + GDD++PRT++ S+ RL R+ G L+S A S ++ T V G+ G R A GE+ R++VPGK + KPRRL +GA++ V +GN++ ++LWQLHD+ L+ M H LD Y+ LDRV
Sbjct: 374 AGTAAALQGKITGMLLGPPPILSPLVACPFLSSVLYGDDILPRTSNRSMSRLYGRIQSSRSTGHKLLSAVGASWVSAAVSTSVDGI---GKRVAGREGEE-FRMSVPGKAFVVKPRRLDHGASMYEVEEGNVRAEVLWQLHDVPLSIKMWRHGTLDSYIHGLDRV 534
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S0C3U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3U1_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.170e-22 Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 3
Query: 1701 RGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGE-DDARLAVPGKVWFAKPRRLKNGATL-------------SRVMQGNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV*I--FAGSGDGGGG 2204
RGR + TLG PPCLS N+R +VTS + GDD+VPRT SL RL RL Q KG G++ + + S TD + + G++ + E ++ RLA+ GK + +PRRL G++ + + L+ +LWQL+D++L+KS+ +HH L Y+ LDR+ + AG DG G
Sbjct: 136 RGRTSAFTLGAPPCLSPNVRAGYVTSLMYGDDVVPRTQRASLDRLCTRL-QKQLKG-GVLQKTVGKSVGWMTDAVSLTVSGLKTHSHGSEGEETRLALVGKTYLIRPRRLGGGSSACGKISSFHEIGSTTHSAKDALRASVLWQLNDVLLSKSLWNHHALPSYIEGLDRLMLRSLAGVADGEAG 317
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S1UN44_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN44_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.260e-22 Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = 3
Query: 1701 RGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGE-DDARLAVPGKVWFAKPRRLKNGATLSRV--MQGN---LKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
RGR + V LG PPC+S NL+ FV S V GDD+V RTTHES+ RL R + M KG L Q +D + +R E ++ RL+V G+ + +PRRL ++ V +G L+E +LWQL+D++L+ S+ HH LD Y+ LDRV
Sbjct: 55 RGRASAVALGPPPCISSNLKAAFVKSIVYGDDVVCRTTHESIERLLSRTKRSM-KGGFLGRQ-----VGWMSDTMSLTATSLRSHAQGSEGEEGRLSVAGQAYLVRPRRLGGTCSIHEVGSQKGGREALREKLLWQLNDVLLSDSLWKHHQLDSYIHGLDRV 210
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S2LJY6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJY6_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.740e-21 Identity = 63/170 (37.06%), Postives = 104/170 (61.18%), Query Frame = 3
Query: 1677 AAPWVAACRGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGEDDARLAVPGKVWFAKPRRLKNGATLSRVMQG------NLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
A W R RV+ + LGCPPC+S + + FVTS + GDD+VPR+++ +L+RL R + + KG G++ +G+ + +D A + + G+ ++ + DA LAVPG+V+ +PRR+ G++ + G N + +LWQL+D++L+KS+ HH Y+R LDRV
Sbjct: 372 ATRWSGFARDRVSALCLGCPPCMS-GIEVDFVTSVINGDDIVPRSSYRTLQRLYGRTERSI-KG-GILGKGVGW----MSDAARLTVTGLTSGSSK-KKDAHLAVPGRVYLIRPRRIGGGSSSIHEVGGSIGGRENFRAAVLWQLNDVLLSKSLWKHHSQSSYIRSLDRV 533
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A6T5V5A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5V5A5_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.390e-20 Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 3
Query: 1701 RGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGE-DDARLAVPGKVWFAKPRRLKNGATLSRVMQ----GNLKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV 2168
+GR + +G PP LS N+R FVTS + GDD++ RTT +SL RL R+ + + +G + G +D + M ++ E ++ +L++PG +F KPRRL +L V G ++ +LWQL DI+L+KSM HH LD Y++ LDRV
Sbjct: 389 QGRSSAFIIGSPPVLSPNVRAAFVTSLIHGDDIICRTTKDSLDRLNNRMEKALSRGMFTKNIGWV------SDAVSLTMTNLKNHARGSEGEETKLSIPGTKYFVKPRRLGGACSLHHVGDISGTGAIRASVLWQLDDILLSKSMWDHHGLDNYIQALDRV 543
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Match: A0A7S3Q7N7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7N7_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.340e-20 Identity = 61/180 (33.89%), Postives = 100/180 (55.56%), Query Frame = 3
Query: 1701 RGRVTCVTLGCPPCLSQNLRLPFVTSFVVGDDMVPRTTHESLRRLKRRLLQVMPKGKGLVSQGMAFSTSLFTDVAGVAMQGVRQATTLGE-DDARLAVPGKVWFAKPRRLKNGAT-------------LSRVMQGN--LKEDMLWQLHDIMLTKSMLSHHCLDKYVRVLDRV*IFAGSGD 2192
RGR + V LG PP LS N++ F+TS ++GDD+V R+T E+L RL++R + K L + TD + M ++ E ++ RLA+PG+V+ +PR +K+G++ + + G L+ +LWQL+D++L++S+ HH LD Y+R LD+V + GD
Sbjct: 571 RGRTSAVALGAPPSLSANIKASFITSVILGDDIVCRSTQETLNRLRQRSM------KRLQGNLLTKKVGWMTDTVSLTMASLQSHAHGSEGEEGRLAIPGQVYLVRPRSMKSGSSXXXXXXXXXNTSSMHEIGTGRDALRAAILWQLNDVLLSRSLWKHHSLDAYIRGLDKVVLRGVGGD 744 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.392.1 >prot_P-fluviatile_contig1.392.1 ID=prot_P-fluviatile_contig1.392.1|Name=mRNA_P-fluviatile_contig1.392.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=713bp MGLFGMICHRRRLRCWLVAFGGSLGCWRVFAADPLPQQAAHPFRTLAAWLback to top mRNA from alignment at P-fluviatile_contig1:4532485..4538507- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.392.1 ID=mRNA_P-fluviatile_contig1.392.1|Name=mRNA_P-fluviatile_contig1.392.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6023bp|location=Sequence derived from alignment at P-fluviatile_contig1:4532485..4538507- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4532485..4538507- >mRNA_P-fluviatile_contig1.392.1 ID=mRNA_P-fluviatile_contig1.392.1|Name=mRNA_P-fluviatile_contig1.392.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4278bp|location=Sequence derived from alignment at P-fluviatile_contig1:4532485..4538507- (Porterinema fluviatile SAG_2381)back to top |