mRNA_P-fluviatile_contig1.389.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: D8LI34_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI34_ECTSI) HSP 1 Score: 190 bits (483), Expect = 8.090e-56 Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 2
Query: 167 DGDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQKNA 484
D DVE+LREQDRFLPIANI+R+VK RLP+NAKVAK+AKET QECVSEFICWITADASDKCQDEKRKTI+GEDIITSM TLGF DYIEPLKVYLAKYRA+VKG +NA
Sbjct: 9 DDDVEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDRNA 114
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A835YU51_9STRA (Nuclear transcription factor Y subunit B4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU51_9STRA) HSP 1 Score: 164 bits (416), Expect = 3.900e-46 Identity = 78/103 (75.73%), Postives = 93/103 (90.29%), Query Frame = 2
Query: 170 GDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
GD E+LREQDRFLPIANI+RI+K LP AK+AK+AKET+QECVSEFIC+IT++ASDKCQ EKRKTINGEDI+ +M+TLGF Y+EPLK+YLAKYR SVKG+K
Sbjct: 8 GDAEELREQDRFLPIANISRIMKKSLPDAAKIAKDAKETVQECVSEFICFITSEASDKCQQEKRKTINGEDILWAMSTLGFDKYVEPLKLYLAKYRESVKGEK 110
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A6H5L5I3_9PHAE (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5I3_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.310e-43 Identity = 73/102 (71.57%), Postives = 92/102 (90.20%), Query Frame = 2
Query: 173 DVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
D E+LREQDRFLPIANI+RI+K LP NAK+AK+AKET+QECVSEFIC+IT++ASDKC+ EKRKTINGED++ +M+TLGF Y++PLK+YL+KYR SVK +K
Sbjct: 8 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLSKYRESVKLEK 109
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A6U3SNW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SNW2_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.290e-42 Identity = 72/110 (65.45%), Postives = 95/110 (86.36%), Query Frame = 2
Query: 149 TESFIPDGDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
T + I +G +++REQDRFLPIAN++RI+K LP NAK+AK+AKET+QECVSEFI +IT++ASDKCQ EKRKTING+D++ +M TLGF Y++PLKVYL+KYR S+KG+K
Sbjct: 7 THAGIEEGPDDEMREQDRFLPIANVSRIMKRSLPQNAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMNTLGFDKYMDPLKVYLSKYRESIKGEK 116
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A6U1F424_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1F424_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.500e-42 Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 2
Query: 173 DVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
D E++REQDRFLPIANI RI+K LP NAK+AK++KETLQECVSEFI +IT++ASDKC EKRKTING+D++ +M+TLGF Y+EPLK+YLAKYR +V+G+K
Sbjct: 11 DYEEIREQDRFLPIANIARIMKLTLPENAKIAKDSKETLQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKIYLAKYREAVRGEK 112
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A7S2IGW8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGW8_9STRA) HSP 1 Score: 155 bits (391), Expect = 7.330e-42 Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 2
Query: 104 LQSSRAAAAVTV----ARMTESFIPDGD-VEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
LQS+ AA ++ A + +S P GD E++REQDR+LPIANI RI+K+ LP NAK+AK++KET+QECVSEFI +IT++ASDKC EKRKTING+D++ +M+TLGF Y+EPLK+YLAKYR +V+G K
Sbjct: 27 LQSTTAAPVTSMMSAAAAVADSKNPPGDDYEEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDK 156
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A7S2U8L2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8L2_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.970e-42 Identity = 76/124 (61.29%), Postives = 99/124 (79.84%), Query Frame = 2
Query: 107 QSSRAAAAVTVARMTESFIPDGDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
Q AAAAV A+ P D E++REQDR+LPIANI RI+K+ LP NAK+AK++KET+QECVSEFI +IT++AS+KC EKRKTING+D++ +M+TLGF Y+EPLK+YLAKYR +V+G K
Sbjct: 27 QPMSAAAAVADAKNP----PGDDYEEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASEKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDK 146
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A7S1U555_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U555_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.610e-41 Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 2
Query: 173 DVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
D+ ++REQDRFLPIANI RI+K LP NAK+AK+AKE +QECVSEFI +I+++ASDKCQ EKRKTING+D+I +M+TLGF +Y+EPLK+YL+KYR SVKG+K
Sbjct: 8 DMAEIREQDRFLPIANIARIMKRSLPDNAKIAKDAKECVQECVSEFISFISSEASDKCQQEKRKTINGDDLIWAMSTLGFDNYVEPLKLYLSKYRESVKGEK 109
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A7S2KKE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KKE3_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.940e-41 Identity = 73/119 (61.34%), Postives = 96/119 (80.67%), Query Frame = 2
Query: 122 AAAVTVARMTESFIPDGDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQK 478
A A+ ARM P + E++REQDR+LPIANI RI+K+ LP NAK+AK++KET+QECVSEFI +IT++ASDKC EKRKTING+D++ +M+TLGF Y+EPLK+YL KYR +V+G K
Sbjct: 31 ADALAAARMP----PGDEYEEIREQDRYLPIANIARIMKNNLPENAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLGKYREAVRGDK 145
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Match: A0A7S2T8U7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T8U7_9CHLO) HSP 1 Score: 151 bits (381), Expect = 2.570e-41 Identity = 73/103 (70.87%), Postives = 93/103 (90.29%), Query Frame = 2
Query: 176 VEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQECVSEFICWITADASDKCQDEKRKTINGEDIITSMTTLGFHDYIEPLKVYLAKYRASVKGQKNA 484
V ++REQDR+LPIANI+RI+K LP+NAK+AK+AKET+QECVSEFI +IT++ASDKCQ EKRKTINGED++ +MTTLGF DY+EPLKVYL K+R + +GQK+A
Sbjct: 19 VGNVREQDRYLPIANISRIMKKSLPNNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGEDLLWAMTTLGFEDYVEPLKVYLQKFREA-EGQKDA 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.389.1 >prot_P-fluviatile_contig1.389.1 ID=prot_P-fluviatile_contig1.389.1|Name=mRNA_P-fluviatile_contig1.389.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=166bp MTESFIPDGDVEDLREQDRFLPIANINRIVKSRLPHNAKVAKEAKETLQEback to top mRNA from alignment at P-fluviatile_contig1:4516845..4518854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.389.1 ID=mRNA_P-fluviatile_contig1.389.1|Name=mRNA_P-fluviatile_contig1.389.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2010bp|location=Sequence derived from alignment at P-fluviatile_contig1:4516845..4518854- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4516845..4518854- >mRNA_P-fluviatile_contig1.389.1 ID=mRNA_P-fluviatile_contig1.389.1|Name=mRNA_P-fluviatile_contig1.389.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=996bp|location=Sequence derived from alignment at P-fluviatile_contig1:4516845..4518854- (Porterinema fluviatile SAG_2381)back to top |