mRNA_P-fluviatile_contig1.387.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.387.1
Unique NamemRNA_P-fluviatile_contig1.387.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A6H5KPN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPN3_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 1.310e-118
Identity = 189/231 (81.82%), Postives = 208/231 (90.04%), Query Frame = 3 
Query:  675 GRSVEILQGFAFAIVSNPLSRFGMAAANEGALALTGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKYVVPMQEAAEQR 1367
            G  +   +G  FA+VSNP+SRFGMAAANEGA+AL+ ALPMQVSVTFTTWIASL AG+WRV+LTPLDTCKTVLQVEG KGFASLMKKVW G LGCLYQGATAAAAATAVGYFPWFLTFN+LN R+ +PSA++ MLLRNA IGLASS+SSDVCSNSIRVLKTTKQAAAA+D+KVTY GAAALVIE DG  GLFGRGL TRI+ANGLQSMLFTVVWRYLHDK+VVP +EAAE R
Sbjct:  212 GGVLRFYRGVVFALVSNPMSRFGMAAANEGAMALSDALPMQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGQLGCLYQGATAAAAATAVGYFPWFLTFNFLNGRLRRPSALAGMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDSKVTYSGAAALVIENDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKFVVPRREAAELR 442
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A7S0GIN6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIN6_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.630e-52
Identity = 107/217 (49.31%), Postives = 144/217 (66.36%), Query Frame = 3 
Query:  687 EILQGFAFAIVSNPLSRFGMAAANEGALALTGALPMQVSVTFT--TWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLL--RNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAK--VTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRY 1319
             + QG  FA+V  PL+RFG  AAN G LAL  + P   S+     T   S+ AG WR++  P+DT KT +QV+GS+GF  L +KV +     LYQGA A+A ATAVG+FPW+LT+NYLN  + + S  + +L   R+A IGL SS  SD CSNSIRV+KTTKQ A+  + K  ++Y+    L+IE+DG  GLFGRGL TR++ N LQ  +F+V+W+Y
Sbjct:   32 RLYQGLPFALVQGPLTRFGDTAANVGILALLESFPETASLPMPLKTVCGSVAAGSWRILCMPIDTSKTAMQVQGSEGFNKLKEKVLSEGPSPLYQGAIASAVATAVGHFPWYLTYNYLNEAIPEVSKETLLLFLGRSALIGLTSSCVSDCCSNSIRVIKTTKQTASLDEGKSDMSYKEILDLIIEQDGLIGLFGRGLQTRLLTNALQGAVFSVLWKY 248
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.550e-52
Identity = 115/248 (46.37%), Postives = 147/248 (59.27%), Query Frame = 3 
Query:  633 WHFHRGRGLRAV-----PPGRSVEILQGFAFAIVSNPLSRFGMAAANEGALAL------TGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKYVVP 1343
            + +  G   RA        G      +G   A+V  PLSRFG  AAN G LAL      T  LP+ V     T  AS  A LWR++L P+DT KT++QVEG  GF +L KK  A     LY GA AA+AAT VG++PWF T+NYL  R+ K +A    L RNA IG ASS+ SD CSNSIRV+K  KQ++      VTY  AA  VI  DG  GLFGRGL T++IANG+Q ++F+V W++  +++  P
Sbjct:   50 YQYRHGTSTRAAITHLYKEGGIPRFYRGVVPALVQGPLSRFGDTAANTGVLALLESMDSTKGLPVGVK----TLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTE---PVTYLQAAKNVIASDGVLGLFGRGLKTKLIANGMQGLMFSVFWKFFEEQFNGP 290
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: E1ZB14_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZB14_CHLVA)

HSP 1 Score: 189 bits (479), Expect = 1.400e-51
Identity = 108/218 (49.54%), Postives = 140/218 (64.22%), Query Frame = 3 
Query:  675 GRSVEILQGFAFAIVSNPLSRFGMAAANEGALALTGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHD 1328
            G      +G A A++  PLSRFG  AAN G LAL   + M V++   T  AS  A  +R+ L P+D CKT++QVEG  GF  L++KV  G  G LY GA AA+AAT VG++PWF  +NYLN  + +   +   LLR+A IG  +S  SD CSNSIRV+KTTKQ A      +TY  A  +V+EKDG  GLFGRGL T+I+ANG+Q +LF+V+WR   D
Sbjct:   36 GGVTRFYRGLAPALLQGPLSRFGDTAANAGMLALLEGVDMPVALK--TMAASGAAASFRIFLMPVDACKTIMQVEGKGGFGKLVQKVRVGGPGVLYHGALAASAATFVGHYPWFAVYNYLNHVLEQYDDLPKRLLRSAFIGFCASAVSDTCSNSIRVVKTTKQTATE---PLTYPQAVKMVVEKDGVIGLFGRGLKTKIVANGMQGLLFSVLWRLGQD 248
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A7S2P162_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P162_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.620e-51
Identity = 110/218 (50.46%), Postives = 146/218 (66.97%), Query Frame = 3 
Query:  696 QGFAFAIVSNPLSRFGMAAANEGALALTGALPM--QVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYL-NSRVGKPSA--MSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKY 1334
            QG +FAI+  PLSRFG  AAN+G  AL  ++          +T IAS   GLWR+ L P+DTCKT+LQV+ S GF +L++KV AG +  LYQGA A A A+ V ++PWF T+N L NS+  + S   + + LL+NA +G  +SI SD  +N+IRV+KTTKQA AA  A VTY  A  ++   DG+ GLFGRGL  RI++NGLQS++F VVWR L  +Y
Sbjct:   27 QGLSFAIIQAPLSRFGSVAANDGINALLASMESTRHWGAGRSTLIASFAVGLWRMFLMPIDTCKTILQVDSSDGFKTLLRKVKAGKIHVLYQGAFANALASIVAHYPWFFTYNQLLNSKFFQRSIEFLKFSLLKNALVGFLASIVSDTITNAIRVVKTTKQAMAAKHA-VTYGEAIRMIWTADGWKGLFGRGLRARILSNGLQSIIFVVVWRGLQQRY 243
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A4S9C5_OSTLU (MC family transporter (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9C5_OSTLU)

HSP 1 Score: 186 bits (472), Expect = 1.990e-50
Identity = 107/210 (50.95%), Postives = 133/210 (63.33%), Query Frame = 3 
Query:  687 EILQGFAFAIVSNPLSRFGMAAANEGALALTGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWR 1316
             + +G +FAIV  PLSRFG  AAN G +A   A   Q+ V+  T  AS+    WR+ LTP+DT KT LQV+G+  FA L  KV  G +G LY GA A  AA  VG +PWF TFNYL   + K         RNA IG+A+SI SD  SNS+RV+KT KQ +   DAK++Y GA   V+EKDG  GLFGRGL TRI  N LQ+M+F+V W+
Sbjct:   58 RLYKGMSFAIVQAPLSRFGDTAANTGVIAALEAYYPQMPVSVMTGFASVGGATWRIFLTPVDTFKTTLQVQGNAAFALLKDKVRTGGVGVLYNGAAANFAANWVGNYPWFATFNYLQKAIPKQDTKLKNNARNALIGMAASIVSDCISNSLRVVKTVKQTSG--DAKLSYTGAIKGVLEKDGMKGLFGRGLSTRIATNVLQAMVFSVAWK 265
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A6C0CTP4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTP4_9ZZZZ)

HSP 1 Score: 186 bits (473), Expect = 2.560e-50
Identity = 101/213 (47.42%), Postives = 138/213 (64.79%), Query Frame = 3 
Query:  696 QGFAFAIVSNPLSRFGMAAANEGALALTGALPM--QVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHD 1328
            +G++ AIV  PLSRFG  AAN G  +L    PM   + +   T  AS+ A  +R++L P+DT KTV+QVEGSKG A+L  K+       L+ GA AA+ AT VG++PWF T+NYLN R+  P+     L+RNA IG  SSI SD CSNS+R++KTT+Q         +Y     +++E+DG++GLFGRGL T+II NG+Q MLF+V W+   D
Sbjct:   72 RGYSAAIVQGPLSRFGDTAANTGVFSLLNQYPMTKDMPIFIKTGFASITASGFRILLMPIDTIKTVMQVEGSKGIATLKDKMQTSGSKVLFHGAMAASVATLVGHYPWFATYNYLNHRIQVPNDPKEKLMRNAFIGFVSSIVSDTCSNSVRIVKTTRQT---IHEDTSYTKIIKMILERDGWSGLFGRGLKTKIITNGVQGMLFSVYWKMGQD 281
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A7S2UB41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB41_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.750e-50
Identity = 111/234 (47.44%), Postives = 149/234 (63.68%), Query Frame = 3 
Query:  696 QGFAFAIVSNPLSRFGMAAANEGALALTGALPM--QVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKYVVPMQEAAEQRHSKVQGTG 1391
            +G  FA+V  PLSRF   AAN+G  AL  AL M  Q     TT +A+L+ G WR++L P+DTCKTVLQV+  +GF  LM KV AG    LYQGA A A  + V ++PWF T+N+L S       +S   +RNA IGL S I+SDV SN +RV+KTTKQA  +    ++Y    ++++  DG+ GLFGRGL TRI+AN LQS+LFTVVWR L +++        + R  +++G G
Sbjct:  132 RGVGFALVQAPLSRFVSTAANDGINALLPALEMTKQWGPGRTTVVAALVVGAWRMLLMPIDTCKTVLQVDSVEGFRHLMLKVQAGQFSVLYQGAVAQAIGSFVSHYPWFYTYNFLVSINFMHHLISSQHIRNALIGLISGITSDVVSNCLRVVKTTKQAMGS-KRSISYAETISMILNADGYRGLFGRGLKTRIMANALQSILFTVVWRGLAERWDTSHTADKDNRRMELEGEG 364
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A4D9D315_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D315_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.280e-49
Identity = 103/217 (47.47%), Postives = 142/217 (65.44%), Query Frame = 3 
Query:  696 QGFAFAIVSNPLSRFGMAAANEGALAL------TGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHD 1328
            +G  FA++  PLSRFG  AAN+G  AL      T  LP+ V     T +A+L AG WR+ L P+DT KTVLQVEG++G+ SLM+++  G L   YQG+ A AAA A+G+FPWF  +  LN  +  P+     L RNA IG  +S+ +D  +N +RV+KTTKQA A+  + ++Y     +++  DG+ GLFGRGL TRI+ NGLQS++FTVVWR L +
Sbjct:  186 EGLGFALIQGPLSRFGSTAANDGCRALLKNFETTRGLPLFVP----TAMAALAAGSWRIFLMPIDTAKTVLQVEGNEGYRSLMRRIGRGELSAFYQGSLATAAAAALGHFPWFYVYTLLNEAIRAPAGWLGKLCRNAFIGFVASLVADTLTNVMRVVKTTKQATASLSS-ISYAQTVQIILAADGWNGLFGRGLSTRILTNGLQSIVFTVVWRALSE 397
[Close]
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Match: A0A192ZID8_9EUKA (Mitochondrial carrier family protein 3 n=1 Tax=Stygiella incarcerata TaxID=1712417 RepID=A0A192ZID8_9EUKA)

HSP 1 Score: 185 bits (469), Expect = 3.570e-49
Identity = 107/223 (47.98%), Postives = 141/223 (63.23%), Query Frame = 3 
Query:  675 GRSVEILQGFAFAIVSNPLSRFGMAAANEGALALTGA--LPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQVEGS-KGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSRVGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVTYRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKY 1334
            G       G   A++  PLSRFG  AAN G L +  A  L  ++ V   T  ASL AG WR+ LTP+DT KT++QV GS KG   L  K+    +GCLY GATA+A ATAVG+FPWF  FN LN+++ K   +   LLRNA +G   S++SD+ SNSIRVLKT +Q     D  +TY  AA +VI + G  GL  RGL ++I+ANG+QS++FTV+WR +  K+
Sbjct:  109 GGIARFYSGAGPALLQGPLSRFGDTAANTGMLEMFKATRLNTKIPVFAQTACASLAAGTWRMFLTPVDTLKTMMQVHGSTKGMQMLKAKLHKSGVGCLYYGATASATATAVGHFPWFFVFNTLNAKLPKAKTVPGNLLRNAFMGFCGSLTSDLISNSIRVLKTVRQT---HDVPITYVAAAQMVIAESGIQGLMFRGLSSKILANGIQSVMFTVMWRMMEAKF 328
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPN3_9PHAE1.310e-11881.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0GIN6_9STRA2.630e-5249.31Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A835ZPC0_9STRA4.550e-5246.37Mitochondrial carrier domain-containing protein n=... [more]
E1ZB14_CHLVA1.400e-5149.54Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A7S2P162_9STRA4.620e-5150.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A4S9C5_OSTLU1.990e-5050.95MC family transporter (Fragment) n=1 Tax=Ostreococ... [more]
A0A6C0CTP4_9ZZZZ2.560e-5047.42Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A7S2UB41_9STRA2.750e-5047.44Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A4D9D315_9STRA1.280e-4947.47Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A192ZID8_9EUKA3.570e-4947.98Mitochondrial carrier family protein 3 n=1 Tax=Sty... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4502807..4509585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue9.6e-95
Seed eggNOG ortholog2880.D8LI24
EggNOG free text desc.Mitochondrial carrier protein
EggNOG OGs28MPG@1,2QU7F@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-04_002970.1
Exons5
Model size2079
Cds size726
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.9156864-UTR-P-fluviatile_contig1:4502806..45028931622815328.9156864-UTR-P-fluviatile_contig1:4502806..4502893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4502807..4502893 +
1693561509.6004434-UTR-P-fluviatile_contig1:4502806..45028931693561509.6004434-UTR-P-fluviatile_contig1:4502806..4502893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4502807..4502893 +
1622815328.9352748-UTR-P-fluviatile_contig1:4503122..45037781622815328.9352748-UTR-P-fluviatile_contig1:4503122..4503778Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4503123..4503778 +
1693561509.6104121-UTR-P-fluviatile_contig1:4503122..45037781693561509.6104121-UTR-P-fluviatile_contig1:4503122..4503778Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4503123..4503778 +
1622815328.9984398-UTR-P-fluviatile_contig1:4508975..45095851622815328.9984398-UTR-P-fluviatile_contig1:4508975..4509585Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4508976..4509585 +
1693561509.6514654-UTR-P-fluviatile_contig1:4508975..45095851693561509.6514654-UTR-P-fluviatile_contig1:4508975..4509585Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4508976..4509585 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.9483476-CDS-P-fluviatile_contig1:4503778..45038321622815328.9483476-CDS-P-fluviatile_contig1:4503778..4503832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4503779..4503832 +
1693561509.6184201-CDS-P-fluviatile_contig1:4503778..45038321693561509.6184201-CDS-P-fluviatile_contig1:4503778..4503832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4503779..4503832 +
1622815328.9624345-CDS-P-fluviatile_contig1:4504801..45049361622815328.9624345-CDS-P-fluviatile_contig1:4504801..4504936Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4504802..4504936 +
1693561509.6258144-CDS-P-fluviatile_contig1:4504801..45049361693561509.6258144-CDS-P-fluviatile_contig1:4504801..4504936Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4504802..4504936 +
1622815328.9727335-CDS-P-fluviatile_contig1:4506302..45066081622815328.9727335-CDS-P-fluviatile_contig1:4506302..4506608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4506303..4506608 +
1693561509.6334999-CDS-P-fluviatile_contig1:4506302..45066081693561509.6334999-CDS-P-fluviatile_contig1:4506302..4506608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4506303..4506608 +
1622815328.9843123-CDS-P-fluviatile_contig1:4508744..45089751622815328.9843123-CDS-P-fluviatile_contig1:4508744..4508975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4508745..4508975 +
1693561509.6416633-CDS-P-fluviatile_contig1:4508744..45089751693561509.6416633-CDS-P-fluviatile_contig1:4508744..4508975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4508745..4508975 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.387.1prot_P-fluviatile_contig1.387.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4503779..4508975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.387.1

>prot_P-fluviatile_contig1.387.1 ID=prot_P-fluviatile_contig1.387.1|Name=mRNA_P-fluviatile_contig1.387.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=242bp
MAAANEGALALTGALPMQVSVTFTTWIASLLAGLWRVILTPLDTCKTVLQ
VEGSKGFASLMKKVWAGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNSR
VGKPSAMSWMLLRNAAIGLASSISSDVCSNSIRVLKTTKQAAAAFDAKVT
YRGAAALVIEKDGFAGLFGRGLITRIIANGLQSMLFTVVWRYLHDKYVVP
MQEAAEQRHSKVQGTGGGGGGGTDRSSTRHHTNERDQQRRR*
back to top

mRNA from alignment at P-fluviatile_contig1:4502807..4509585+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.387.1 ID=mRNA_P-fluviatile_contig1.387.1|Name=mRNA_P-fluviatile_contig1.387.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6779bp|location=Sequence derived from alignment at P-fluviatile_contig1:4502807..4509585+ (Porterinema fluviatile SAG_2381)
ATGGACACAAGAGTGCGAGTAGAGCGCGAAGGAGGGAGAGCACACGACAA
AGCGAGAAACACACCGCGCGATGAGAGATCCTCACAGGTTAGCTCTCCTA
TTTGTACGCCTCCACCGCGCATTATTTGCTCGCGGTAAAGCTTTTCAAGC
TCGTCGCAAGAGACAGGTCAGCGGTGCGCGGGCAACGTTCGTTTTAACTC
TCATCGAACAGAGTAGGCGAACATGAGTATTGCAGCCATACATCGGTTAC
TCGGCCAATCATGCACTCAGATCATACGTTGCTGCATTCGCTCTTCATCT
GATTTGGCGGTGTCAGGAGCCGGCGGCGACGGTTGGCCTCCCTGGCTGTA
ACATGTGTGGGGCTTGCCCAAGGCCGCGTGCCAAGCGCAACGCTGGGCTT
CGCCAAAGAAGGGTGCAGTCGTTGCGACGGTAGGACGCCATCACCGTCCG
CATTATCGGATATTCCTCCGGGCAGCGGAAGGGCTGCTCGAGTTATCTTT
CGTTGCTCGACCTCCGGCACAGAAGGGTCATCGGTCGACTCCAGAACGGC
AGGCGGTGGCCACACCCGGTCGGCAACCGGGCGGCTGGTCACCCACGGTC
TCACGGGCGGGGCCGTATTCCCTCGCAACGGGCACGCCCGAAAACAGCAA
CGACCGCAGCCTCGATTACCGAAGAGTAACGCTGCAACGCACACCGCTGA
CTACGGAAACACTGAGCGGAGCGCCTGGCCAGAGGTCCGGCGCGTTTTTA
GGAGATGCTTGGCGAGGGCGGGGAGCGGAGGTCTCCAGGGGCGGCGGCTG
GCTTCTTGCAGGTCTTCACCCTCATGTGGCTGAGGACGATCGTGAACTAC
CAGTGCCGGTATGGCACTTCCATCGCGGCCGCGGCCTCCGAGCTGTACCG
CCAGGGCGGAGTGTTGAGATTCTACAGGGGTTTGCCTTCGCCATTGTGTC
CAACCCGCTGTCGCGGTTCGGGATGGCCGCGGCCAACGAGGGTGCTCTGG
CGCTCACCGGCGCACTACCGATGCAGGTACCTAAATCTTACAGTACGATC
GAGCATTTTCGTTGGCCAAACATGCGATAATGCCGGACTCTGCGTTGATC
CTTTCCAACCCTTTTGTCGCACCCCTCCCCCCCCCACATCACTGGAAATG
GGCAAAAAAATTCGTGAGCAGTTTGATGAGACGTGTGGGTTTTCTTTTGT
TCCGTAAATCATGAAGGCTCATGCTGTCTTTCTCCTCAATCTCCCTTCGA
GACAACCTTCTTTCAAGTGACTTTCGTGGGTTTTTACGGACCTATGATAC
CCTCTTTTAGTGGCAGGGCTCAGCGTCTCTGTGGGAGAGTCGGGCGTCTT
GGGAGGGCTTCAAGTATCCCAAAGTGCTCCCTTTCCCTCCTGACGGTCGC
CGCCTTGAGTTTGGTCAAGAAGCGGGGGGGGTGCGCGCTGTGGCTTTTTT
CGCTCCCCGTCTCGAGTGAAATTTACCCCGGGGTGTTTCCACTTAATGTA
CGATCTTCCCGCCCTGGCGCATTTTATCCCCGGTGTAGCGGAATCCCACA
CCGCAAAAATGACTCCTGCCAAACCGAGATGCACATGGTGTGTGGGTGTT
GCTGTCCTTGTCTCTACGTGGCAACCCCCCTGCTCGCACGCTCCCACCAC
TCTGTTGAAGCTGGCTTCCACTTGAGCCTTCGCGTGCGCACGGTTTCGCT
GTACAGTGGCAGTCCCAGTTCAACAAATCCCTGTTTGGCGACGTGCTTCG
TAAGGCGACCCCTGTAGACGTCCGTGCATACTCGGCTTGAATTTGGCGAT
CTGCCCTGAATAGTGGTTGGATTTCGTGCTGTCTATGGGGATCGCCAAAC
CGGGACCTCCACTGCTGTACCACCTGCATCACACATTACACACACCGTTT
CCATATTTTTCTGCCTTGTCGACGTCGCTACCTCCGGGAAATCGCGTGTG
TTCCAGAATTGACGGACCAAGGTATTTTCATCGTCCTCACGGCAGGTATC
GGTGACTTTCACGACGTGGATCGCCAGTCTCCTGGCCGGGTTGTGGAGGG
TGATACTGACGCCGCTCGACACGTGCAAGACCGTGCTGCAGGTGGAAGGA
TCCAAGGGGTTCGCGTCGCTGATGAAAAAGGTCAGCGCGACACAGCTGAT
GCCTACATTGACGGCCGCCAACGCAGGTCTCGACGACCATTCGATTTTGT
CAAGCGCCCTTTGGCTCCCGATTTTGGGCGCCCGGTGTGCATTTCGGACA
ACGGCTTGGAGCGAGGCTTCGAATCAGCTGGTGCATCGGCTCACAGTATC
CGCCTTGACTCGCCAATATCCGAGCCCGCGCGATGTGAGGGAGGCCCGCT
TGTCTGGGCGTTGCGGGCGGGCATGCTTCTCGGGCAGAAGTCTGTTCGTG
GACCGATAAAAAAAGAACGGACGTCACTTCGGACGTCTTTACCGTGTGAT
TTTGGCAAGTGTGAACCAACAAGATGAGACGAAACTGCACGCATTTCTAC
GGCTAGCTTTTGTCTACCCTGAGCTGTCCCTCCAGGCTCCGCTTGTGGGC
AATTTTGAGGGACTTTTGCTGGACGCTCCGGTGTACAAATCAGCAGTGAC
TGGTGCAGGCCATCCTCCTTTAATGCTGCAGTTCAATCACGGACAATCAA
GGCGAGCCGGTGTTTGTGAGCCGGCGAACACACGAGACATCGAGCCACCA
ATGTTCTTTGTCGTGGTAATGTTGCTGCTCCGCTACCGAAAAACATTATT
TCTTGAGAAGTAGCGAGCAGGGCATTCCTCTTTCAACTTTCAGGTGATTT
CTACAAAACAATAATGCCCGCGACCATTGATCTGGCCGGTAGTCACTTAT
TGAGCACACGCAGTTTGCCACGTAGAAATCAAGACAAATTTTGAGCTACA
AAGCCGGAAAAAAGCCTCCGATGTTTACCTAGGATTCTAGACAGAGGCAA
CAGCGAGGCCGCTGGACGGTCACAATGAATTGAAACACAGTGACCACCGG
ACCGATCGGTGTAGATGAAGGCGGCTCCGGCAAGGGGCAGTTCGCAGCAA
CGGAAAGTTTGGAGCCTTGCATTCTTCCACGAGCTCAGCAACTCACTCCC
ACGAACAGCGGTCGTCCAAAGCAGTGGCTGCTGTTTTGACGACGTTCTCG
GAATGGCATCGCTTGCTGCGGGCGTGTAAGATCGGTGTCCCCACCTGCCC
GTTACGCAGTAGCAATGGCGGTGCTGCCGAGGGATCAAGAAAAATGTTGA
CCCGAACGCAGTAAAAAAATTATTGGGTTCGCTTCAGGAACGTACGTTAG
GACAGTTGGGTGGCGCGTTCGGAAGGAGGTCAAGGCATAGCTGTTGCAAA
AGCCGGCTGGAGGGAGTTGTCACGCCCCTTTGCTCTCGATGTATCTTTCA
TCCCACTTCCAAGCGCAAAATGCACTTCTCAAAATGTCGCATCCGTCTCT
CCTGGTCTAGAAGTATCAATGTCCGCCGTCGTCTGCGCAACAACAGGTGT
GGGCTGGCAACCTTGGTTGCCTCTATCAGGGGGCAACCGCTGCGGCTGCG
GCGACCGCTGTAGGCTACTTCCCGTGGTTCCTGACCTTCAACTACCTCAA
CTCCCGCGTGGGAAAGCCCTCGGCCATGTCCTGGATGCTCCTGAGAAACG
CGGCGATCGGTCTCGCATCGTCAATCTCTTCTGACGTGTGCTCCAACTCC
ATCCGCGTCCTGAAGACTACAAAGCAAGCGGCCGCCGCGTTCGACGCGAA
GGTCACATACAGGGGAGCGGCGGCCCTGGTCATCGAGAAGGACGGCTTCG
CGGTGAGTTTTTAGTCCGTGGGAATGGCGGCGAGTTTTTAGGTGTGGGAA
GCGGACGAGCACGGTGAACACCTACCATTGGTTCCATGCGAAAGTCAGGC
GGGCCATACCACTCCAAATTCGATTGCGGCGGGCGTGGAACACGCCCACA
GCCCTTGCATAGAATGTAGGTACACTCCACGGTTCGGGCCAAACGGCACA
AACCAGTCAAGTTGGCTGCCCCCCTTTTGTTCGACAACTCGGTGACGATA
CCCATCAATTATTTTGCTTTTGCCTTCGCCCACTTCTGTCTTACCTTCAT
GCCCCAATTTTGTGCACTACTATGACCTCGGGAGCTACCCTCTCCGTCAC
CGCACGGCCTGAGATAGAGTAGCCTCGGAGGTCTCTTCCACACTTCTCTG
AACTGAAGATTGACCTTTGCGAAGAAACGAGAAACCATGAGTGCGGTTCA
TGCACTCGCACAAGCACACACACTCGGCTTGCGCGCATACCCGGCACGAG
GACGAACCCCTCGGATCGCGGAAGCACGCCCGGAGCGCCCTTTATCTCCC
TCGCAGAGTCAGGGCAAGGATCATATGACGGTCAGGACAATTCTGTTCAA
CCCTCATGCACGGGAAATGAGGGGAAATCCTCTGCCCGCCCGCTGTAGGG
TTGGAGAGAGAGAGGGCAGGAGAGAAAGAGAAAGACGCAGGCGGACAGTT
ATGAAGGGTCAACTCTTTCACAGCGGATGGTCTTTGGATTGGTACAGGTG
CAGCAGAGATGTTCGAGGAAATTCCATGAACTTCCGTGTGCCCCGCAATA
ACGTGTAATCCGAAGGCCCGGAACCCGACAAAAGCGTGAGTATCAAAGCG
GGGGCTGGAGTAGGAATTCGGGAGTGATCGATGAATTTCAGAAGCAGTGG
GTGGTGTATTCAACCGGGACCAAGGGTACCACGTTCGACCGACGAAAGCA
TACTCCGGTGATAACATTTTGAGTTTTAAATATCATCACCGGGTATCACT
TCGGGAGCGTGCTTTCTCATGTAGCCCTGTCACATGATCCTGGAGTACTT
TTGTGTTCGAGGCTCCATTGAACTCTTGGAAGTAGGAGCACCGGTGTGCT
GTGCTTTCGTGCGGGGGTGTGCTTTCTTCTGTGCGTGTGCTTTATTCTGG
CGTATACGGTTTAATGGGGTAATCAGGTGAGCCCTTCGCACCGTGGTCCT
TTTTGGCGCCAGATAATGCTTCGGTTTTCGTCAAAGTGTGTCGACTTATG
CTGCTCGGGATACCATCCTCTGTGTCGGTCATGGGCGTGTCATTCGCCCT
TCAGCATTAATTTGGAGTGATTTGGCCCGCTCCCAAGTGGTTCCGGTGTT
TACCTCTTCGCGCTTTGCAGACTTAGAATGGGGGGGTTTCCAATGTTTAT
TTTTTCCGTCTCCAGTCTCTCCAGATCAAGGATAAACCATTCATGCGCCA
TCTTAGCCGTAGAAGGAGTTGTGCTGCAGCGACTAGATTTCCGTGGAGGC
CAGACTTTTGGGTTTGCGCATGGGTGACCATGTGTTCGCAGGAGAGAGCA
TTCCGGCTCACGAAGAAGGGCCGTTCCGCCGAAGAAGCCACCCCTGAACA
AGGACGAATAATCGAGAGTGAGTTACCATGAAACGAAGCAGGCACTATGT
CACACGTTTCTCCTCCATCGGCGGGGGTTTTACGTGTGAAATCCCAACCA
CCAATACCCGCGCAGAGAGCCAAGGTGTGACGCAGTGAGGGCTTTGCTAC
TGGTTCTTGCTCTCTCGCTTTCCTATTTTTGCTTGATGCAGGCTTCTGCG
ACGAAAAACAGTAATTCGTCGGCTGCATGCCGTCCTTAGCTGACGAACCG
CCGCGATTGGCTCGACAACAAGATTTGAATAATCCTCTCAAGTCTAGTCG
TTTGGGGGGGGAACTCTGTCCGCTCCTCTCGTCTCTGCAGTAATGGTATG
GTCTGTGATCTGTCTGATGAATCGGCCCTGAATTGCACAGGATAGACCCA
CCTCACCCCCCCGACGACAAATGATAATCCGCCGCTTCGCGCGGCACATC
CGCAAGGAAGAATCATCGTGCCATGCCGAAGTCGTCATCCCATCTGCGCC
CCGTTTTTACACCATCGCCTCCTGTCGTTGAGCTTCAGGGCTTGTTCGGA
CGGGGCCTGATTACACGAATCATTGCCAATGGGTTGCAATCGATGCTCTT
CACGGTGGTTTGGCGGTATCTGCATGACAAGTACGTGGTGCCGATGCAGG
AGGCCGCAGAGCAGCGGCACTCGAAGGTTCAGGGCACCGGCGGCGGCGGC
GGCGGCGGTACCGATCGGAGCAGTACAAGACATCATACGAACGAGCGCGA
TCAGCAGCGGCGGCGGTAGTTGTTCGGATCCGCTCGAAGTGGTAGACCTT
GATGAACGACGGCGGCGACGGATTTGAGAGGCGGCCGGCCCGCGATTGCG
TGGGTGGAGATGATCCGTGCACGTGATCAAGGCGGGCAGTGTAAAACGCC
GGACGGCACCTTGTGCATGAAGCCAGGGACGCTGCCCTGCGGCCGAGATT
CTTCATGCACCAGGGAAGGCGGCAGGGAAGACGAAGGTAGCCCAGCCGAC
GCAAGGTCCCCCGCGTGGAATGAACCTGTTGTCGAGCTTCTGACGGACAC
TTCGGAGTAGATACGGTATGCAGTGATGCAGACCGCCCGCTACCGTTTCA
CCTTTGGCGGGATAGAAGGGGTCAAGAAGCACGGCAGTTTTCTGTTGGTT
GAGAGAGAGGGGCTCAAACCTGTGTGCCGCCCTTGTCCCGGCCAGGCCCT
GCATTTCCTGGGGCGGCACTTTCATGCGTGAGGTCGACTATCTTTTTCGG
AAATGGACCACCGGCTCGTGCAAATAATCGTTGCGCGATACAGGGCCTTG
CCAGGAGAACATGGCAAGAGAAAAACGTTCACAATATATTTGGTGTCATT
TGAGGTTCGGTTACCCAGCTAAAGCGAGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:4502807..4509585+

>mRNA_P-fluviatile_contig1.387.1 ID=mRNA_P-fluviatile_contig1.387.1|Name=mRNA_P-fluviatile_contig1.387.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1452bp|location=Sequence derived from alignment at P-fluviatile_contig1:4502807..4509585+ (Porterinema fluviatile SAG_2381)
ATGGCCGCGGCCAACGAGGGTGCTCTGGCGCTCACCGGCGCACTACCGAT
GCAGATGGCCGCGGCCAACGAGGGTGCTCTGGCGCTCACCGGCGCACTAC
CGATGCAGGTATCGGTGACTTTCACGACGTGGATCGCCAGTCTCCTGGCC
GGGTTGTGGAGGGTGATACTGACGCCGCTCGACACGTGCAAGACCGTGCT
GCAGGTGGAAGGATCCAAGGGGTTCGCGTCGCTGATGAAAAAGGTATCGG
TGACTTTCACGACGTGGATCGCCAGTCTCCTGGCCGGGTTGTGGAGGGTG
ATACTGACGCCGCTCGACACGTGCAAGACCGTGCTGCAGGTGGAAGGATC
CAAGGGGTTCGCGTCGCTGATGAAAAAGGTGTGGGCTGGCAACCTTGGTT
GCCTCTATCAGGGGGCAACCGCTGCGGCTGCGGCGACCGCTGTAGGCTAC
TTCCCGTGGTTCCTGACCTTCAACTACCTCAACTCCCGCGTGGGAAAGCC
CTCGGCCATGTCCTGGATGCTCCTGAGAAACGCGGCGATCGGTCTCGCAT
CGTCAATCTCTTCTGACGTGTGCTCCAACTCCATCCGCGTCCTGAAGACT
ACAAAGCAAGCGGCCGCCGCGTTCGACGCGAAGGTCACATACAGGGGAGC
GGCGGCCCTGGTCATCGAGAAGGACGGCTTCGCGGTGTGGGCTGGCAACC
TTGGTTGCCTCTATCAGGGGGCAACCGCTGCGGCTGCGGCGACCGCTGTA
GGCTACTTCCCGTGGTTCCTGACCTTCAACTACCTCAACTCCCGCGTGGG
AAAGCCCTCGGCCATGTCCTGGATGCTCCTGAGAAACGCGGCGATCGGTC
TCGCATCGTCAATCTCTTCTGACGTGTGCTCCAACTCCATCCGCGTCCTG
AAGACTACAAAGCAAGCGGCCGCCGCGTTCGACGCGAAGGTCACATACAG
GGGAGCGGCGGCCCTGGTCATCGAGAAGGACGGCTTCGCGGGCTTGTTCG
GACGGGGCCTGATTACACGAATCATTGCCAATGGGTTGCAATCGATGCTC
TTCACGGTGGTTTGGCGGTATCTGCATGACAAGTACGTGGTGCCGATGCA
GGAGGCCGCAGAGCAGCGGCACTCGAAGGTTCAGGGCACCGGCGGCGGCG
GCGGCGGCGGTACCGATCGGAGCAGTACAAGACATCATACGAACGAGCGC
GATCAGCAGCGGCGGCGGTAGGGCTTGTTCGGACGGGGCCTGATTACACG
AATCATTGCCAATGGGTTGCAATCGATGCTCTTCACGGTGGTTTGGCGGT
ATCTGCATGACAAGTACGTGGTGCCGATGCAGGAGGCCGCAGAGCAGCGG
CACTCGAAGGTTCAGGGCACCGGCGGCGGCGGCGGCGGCGGTACCGATCG
GAGCAGTACAAGACATCATACGAACGAGCGCGATCAGCAGCGGCGGCGGT
AG
back to top